RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 FGD4Q96M96 766 aa16.17■□□□□ 0.18
TRIM23-202ENST00000274327 PCDHA2Q9Y5H9 948 aa16.17■□□□□ 0.18
TRIM23-202ENST00000274327 GOLGA6L6A8MZA4 724 aa16.16■□□□□ 0.18
TRIM23-202ENST00000274327 COBLO75128 1261 aa16.16■□□□□ 0.18
TRIM23-202ENST00000274327 PMS1P54277 932 aaKnown RBP16.16■□□□□ 0.18
TRIM23-202ENST00000274327 UBASH3AP57075 661 aa16.16■□□□□ 0.18
TRIM23-202ENST00000274327 RINT1Q6NUQ1 792 aa16.16■□□□□ 0.18
TRIM23-202ENST00000274327 TTI2Q6NXR4 508 aa16.16■□□□□ 0.18
TRIM23-202ENST00000274327 APTXQ7Z2E3 356 aaKnown RBP16.16■□□□□ 0.18
TRIM23-202ENST00000274327 GUF1Q8N442 669 aaKnown RBP16.16■□□□□ 0.18
TRIM23-202ENST00000274327 PIGOQ8TEQ8 1089 aa16.16■□□□□ 0.18
TRIM23-202ENST00000274327 P2RX5Q93086 422 aa16.16■□□□□ 0.18
TRIM23-202ENST00000274327 MMP19Q99542 508 aa16.16■□□□□ 0.18
TRIM23-202ENST00000274327 RUSC1Q9BVN2 902 aa16.16■□□□□ 0.18
TRIM23-202ENST00000274327 ZSWIM4Q9H7M6 989 aa16.16■□□□□ 0.18
TRIM23-202ENST00000274327 MORF4L1Q9UBU8 362 aa16.16■□□□□ 0.18
TRIM23-202ENST00000274327 PLXNB2O15031 1838 aa16.16■□□□□ 0.18
TRIM23-202ENST00000274327 TRIM49BA6NDI0 452 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 WDR64B1ANS9 1081 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 SERPINC1P01008 464 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 GCLCP48506 637 aaPredicted RBP16.15■□□□□ 0.18
TRIM23-202ENST00000274327 HUNKP57058 714 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 FAM26FQ5R3K3 315 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 C1orf186Q6ZWK4 172 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 GPRC5AQ8NFJ5 357 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 PTPN18Q99952 460 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 DUSP9Q99956 384 aaKnown RBP16.15■□□□□ 0.18
TRIM23-202ENST00000274327 REEP2Q9BRK0 252 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 PDCL3Q9H2J4 239 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 BICDL2A1A5D9 508 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 ZBTB39O15060 712 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 KRT18P05783 430 aaKnown RBP16.15■□□□□ 0.18
TRIM23-202ENST00000274327 CDK11BP21127 795 aaKnown RBP16.15■□□□□ 0.18
TRIM23-202ENST00000274327 QARSP47897 775 aaKnown RBP16.15■□□□□ 0.18
TRIM23-202ENST00000274327 CACNB1Q02641 598 aaPredicted RBP16.15■□□□□ 0.18
TRIM23-202ENST00000274327 KCTD2Q14681 263 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 TPD52L1Q16890 204 aaPredicted RBP16.15■□□□□ 0.18
TRIM23-202ENST00000274327 HSP90AA4PQ58FG1 418 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 CENPPQ6IPU0 288 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 MTERF4Q7Z6M4 381 aaKnown RBP16.15■□□□□ 0.18
TRIM23-202ENST00000274327 RASAL3Q86YV0 1011 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 DRC7Q8IY82 874 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 SMCR8Q8TEV9 937 aaPredicted RBP16.15■□□□□ 0.18
TRIM23-202ENST00000274327 PORCNQ9H237 461 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 TCEAL9Q9UHQ7 104 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 SAMM50Q9Y512 469 aa16.15■□□□□ 0.18
TRIM23-202ENST00000274327 PASKQ96RG2 1323 aa16.14■□□□□ 0.17
TRIM23-202ENST00000274327 B4DLN1 442 aa16.14■□□□□ 0.17
TRIM23-202ENST00000274327 TPM3P06753 285 aa16.14■□□□□ 0.17
TRIM23-202ENST00000274327 CCNA1P78396 465 aa16.14■□□□□ 0.17
TRIM23-202ENST00000274327 FOXR2Q6PJQ5 311 aa16.14■□□□□ 0.17
TRIM23-202ENST00000274327 C4orf19Q8IY42 314 aa16.14■□□□□ 0.17
TRIM23-202ENST00000274327 SMAP1Q8IYB5 467 aaPredicted RBP16.14■□□□□ 0.17
TRIM23-202ENST00000274327 NOC3LQ8WTT2 800 aaKnown RBP16.14■□□□□ 0.17
TRIM23-202ENST00000274327 SEMA6BQ9H3T3 888 aa16.14■□□□□ 0.17
TRIM23-202ENST00000274327 THAP9Q9H5L6 903 aa16.14■□□□□ 0.17
TRIM23-202ENST00000274327 EFCC1Q9HA90 598 aa16.14■□□□□ 0.17
TRIM23-202ENST00000274327 INTS13Q9NVM9 706 aa16.14■□□□□ 0.17
TRIM23-202ENST00000274327 KCND2Q9NZV8 630 aa16.14■□□□□ 0.17
TRIM23-202ENST00000274327 LIMA1Q9UHB6 759 aaKnown RBP16.14■□□□□ 0.17
TRIM23-202ENST00000274327 NRBP1Q9UHY1 535 aa16.14■□□□□ 0.17
TRIM23-202ENST00000274327 DBR1Q9UK59 544 aaKnown RBP16.14■□□□□ 0.17
TRIM23-202ENST00000274327 PLXNA1Q9UIW2 1896 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 LOC102724159A0A0B4J2E5 919 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 A0A1B0GTH6 734 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 PGK2P07205 417 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 PSMC5P62195 406 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 RAD51AP2Q09MP3 1159 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 PWP2Q15269 919 aaKnown RBP16.13■□□□□ 0.17
TRIM23-202ENST00000274327 UGCGQ16739 394 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 CCDC144BQ3MJ40 725 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 HERC4Q5GLZ8 1057 aaPredicted RBP16.13■□□□□ 0.17
TRIM23-202ENST00000274327 ANKRD40Q6AI12 368 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 GLIS3Q8NEA6 775 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 MORC4Q8TE76 937 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 PARK7Q99497 189 aaKnown RBP16.13■□□□□ 0.17
TRIM23-202ENST00000274327 BCAS3Q9H6U6 928 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 JPH1Q9HDC5 661 aaPredicted RBP16.13■□□□□ 0.17
TRIM23-202ENST00000274327 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.13■□□□□ 0.17
TRIM23-202ENST00000274327 SLC9A2Q9UBY0 812 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 PCDHA10Q9Y5I2 948 aa16.13■□□□□ 0.17
TRIM23-202ENST00000274327 SP2Q02086 613 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 SPAG1Q07617 926 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 CCDC186Q7Z3E2 898 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 IRF2BP1Q8IU81 584 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 MYOCDQ8IZQ8 938 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 ANKRD13CQ8N6S4 541 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 TRIM47Q96LD4 638 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 MPHOSPH6Q99547 160 aaKnown RBP16.12■□□□□ 0.17
TRIM23-202ENST00000274327 FGFBP2Q9BYJ0 223 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 MYH11P35749 1972 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 MCM3APO60318 1980 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 LRRC10BA6NIK2 292 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 RSPH10B2B2RC85 870 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 RSPH10BP0C881 870 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 GAP43P17677 238 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 GUCY2CP25092 1073 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 NR1I3Q14994 352 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 LRRC41Q15345 812 aa16.12■□□□□ 0.17
TRIM23-202ENST00000274327 VSTM4Q8IW00 320 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms