RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 SYNRGQ9UMZ2 1314 aa15.7■□□□□ 0.1
SS18-201ENST00000269137 IGF2BP3O00425 579 aaKnown RBP eCLIP15.7■□□□□ 0.1
SS18-201ENST00000269137 PSMA7O14818 248 aa15.7■□□□□ 0.1
SS18-201ENST00000269137 COASYQ13057 564 aa15.7■□□□□ 0.1
SS18-201ENST00000269137 GIT2Q14161 759 aa15.7■□□□□ 0.1
SS18-201ENST00000269137 C4orf19Q8IY42 314 aa15.7■□□□□ 0.1
SS18-201ENST00000269137 TRMT44Q8IYL2 757 aaKnown RBP15.7■□□□□ 0.1
SS18-201ENST00000269137 KIAA0895Q8NCT3 520 aa15.7■□□□□ 0.1
SS18-201ENST00000269137 NELFBQ8WX92 580 aa15.7■□□□□ 0.1
SS18-201ENST00000269137 MRFAP1L1Q96HT8 127 aa15.7■□□□□ 0.1
SS18-201ENST00000269137 SLC9A2Q9UBY0 812 aa15.7■□□□□ 0.1
SS18-201ENST00000269137 DBR1Q9UK59 544 aaKnown RBP15.7■□□□□ 0.1
SS18-201ENST00000269137 CTNND2Q9UQB3 1225 aa15.7■□□□□ 0.1
SS18-201ENST00000269137 LRRC37A2A6NM11 1700 aa15.7■□□□□ 0.1
SS18-201ENST00000269137 ADGRA2Q96PE1 1338 aa15.7■□□□□ 0.1
SS18-201ENST00000269137 ASB14A6NK59 587 aa15.69■□□□□ 0.1
SS18-201ENST00000269137 FAM155AB1AL88 458 aaPredicted RBP15.69■□□□□ 0.1
SS18-201ENST00000269137 KRT18P05783 430 aaKnown RBP15.69■□□□□ 0.1
SS18-201ENST00000269137 PSMC5P62195 406 aa15.69■□□□□ 0.1
SS18-201ENST00000269137 SP2Q02086 613 aa15.69■□□□□ 0.1
SS18-201ENST00000269137 ZNF792Q3KQV3 632 aa15.69■□□□□ 0.1
SS18-201ENST00000269137 RINT1Q6NUQ1 792 aa15.69■□□□□ 0.1
SS18-201ENST00000269137 KCNV1Q6PIU1 500 aa15.69■□□□□ 0.1
SS18-201ENST00000269137 SEPT14Q6ZU15 432 aa15.69■□□□□ 0.1
SS18-201ENST00000269137 C1orf186Q6ZWK4 172 aa15.69■□□□□ 0.1
SS18-201ENST00000269137 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.69■□□□□ 0.1
SS18-201ENST00000269137 RTN4Q9NQC3 1192 aaKnown RBP15.69■□□□□ 0.1
SS18-201ENST00000269137 CDC25BP30305 580 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 MAPK4P31152 587 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 STX17P56962 302 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 GUF1Q8N442 669 aaKnown RBP15.68■□□□□ 0.1
SS18-201ENST00000269137 RUSC1Q9BVN2 902 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 MAPK8IP1Q9UQF2 711 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 PCDHA2Q9Y5H9 948 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 IVNS1ABPQ9Y6Y0 642 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 PLXNB2O15031 1838 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 WDR81Q562E7 1941 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 NPHP3-ACAD11A0A0J9YXS1 232 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 TMEM88BA6NKF7 163 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 ZBTB39O15060 712 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 DKC1O60832 514 aaKnown RBP eCLIP15.68■□□□□ 0.1
SS18-201ENST00000269137 PSAPP07602 524 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 ATP1A3P13637 1013 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 ADORA2AP29274 412 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 FANCCQ00597 558 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 NEDD9Q14511 834 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 FAM26FQ5R3K3 315 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 ABHD15Q6UXT9 468 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 ZNF467Q7Z7K2 595 aaPredicted RBP15.68■□□□□ 0.1
SS18-201ENST00000269137 IFNL1Q8IU54 200 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 HPS3Q969F9 1004 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 REEP2Q9BRK0 252 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 BCAS3Q9H6U6 928 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 SLC39A2Q9NP94 309 aa15.68■□□□□ 0.1
SS18-201ENST00000269137 COBLO75128 1261 aa15.67■□□□□ 0.1
SS18-201ENST00000269137 ATG7O95352 703 aa15.67■□□□□ 0.1
SS18-201ENST00000269137 UBA1P22314 1058 aaKnown RBP15.67■□□□□ 0.1
SS18-201ENST00000269137 CCNE1P24864 410 aa15.67■□□□□ 0.1
SS18-201ENST00000269137 ACTR2P61160 394 aa15.67■□□□□ 0.1
SS18-201ENST00000269137 GRB14Q14449 540 aa15.67■□□□□ 0.1
SS18-201ENST00000269137 TAF1CQ15572 869 aaPredicted RBP15.67■□□□□ 0.1
SS18-201ENST00000269137 HERC4Q5GLZ8 1057 aaPredicted RBP15.67■□□□□ 0.1
SS18-201ENST00000269137 CDKAL1Q5VV42 579 aa15.67■□□□□ 0.1
SS18-201ENST00000269137 FOXR2Q6PJQ5 311 aa15.67■□□□□ 0.1
SS18-201ENST00000269137 GPR142Q7Z601 462 aa15.67■□□□□ 0.1
SS18-201ENST00000269137 SAMSN1Q9NSI8 373 aaKnown RBP15.67■□□□□ 0.1
SS18-201ENST00000269137 ANKEF1Q9NU02 776 aa15.67■□□□□ 0.1
SS18-201ENST00000269137 MCM3APO60318 1980 aa15.67■□□□□ 0.1
SS18-201ENST00000269137 DOCK5Q9H7D0 1870 aa15.67■□□□□ 0.1
SS18-201ENST00000269137 BICDL2A1A5D9 508 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 ARHGEF35A5YM69 484 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 TOMM70O94826 608 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 GAP43P17677 238 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 GUCY2CP25092 1073 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 SREBF2Q12772 1141 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 UGCGQ16739 394 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 HS1BP3Q53T59 392 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 CENPPQ6IPU0 288 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 TTI2Q6NXR4 508 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 CYFIP1Q7L576 1253 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 PLEKHH3Q7Z736 793 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 ATP6V0A1Q93050 837 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 P2RX5Q93086 422 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 ABT1Q9ULW3 272 aaKnown RBP15.66■□□□□ 0.1
SS18-201ENST00000269137 DIS3Q9Y2L1 958 aaKnown RBP15.66■□□□□ 0.1
SS18-201ENST00000269137 COL4A3BPQ9Y5P4 624 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 PLXNA1Q9UIW2 1896 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 YWHABP31946 246 aaKnown RBP15.66■□□□□ 0.1
SS18-201ENST00000269137 RARRES1P49788 294 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 RAD51AP2Q09MP3 1159 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 TPD52L1Q16890 204 aaPredicted RBP15.66■□□□□ 0.1
SS18-201ENST00000269137 MIS18BP1Q6P0N0 1132 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 IFNKQ9P0W0 207 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 DDX41Q9UJV9 622 aaKnown RBP15.66■□□□□ 0.1
SS18-201ENST00000269137 ODF2LQ9ULJ1 636 aa15.66■□□□□ 0.1
SS18-201ENST00000269137 SYNGAP1Q96PV0 1343 aa15.65■□□□□ 0.1
SS18-201ENST00000269137 SLC15A5A6NIM6 579 aa15.65■□□□□ 0.1
SS18-201ENST00000269137 CBFA2T2O43439 604 aa15.65■□□□□ 0.1
SS18-201ENST00000269137 TLR2O60603 784 aa15.65■□□□□ 0.1
SS18-201ENST00000269137 TBCAO75347 108 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms