RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 SEC31AO94979 1220 aaKnown RBP12.98□□□□□ -0.33
SRRM4-201ENST00000267260 PLTPP55058 493 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 CCNYQ8ND76 341 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 THAP11Q96EK4 314 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 CFAP36Q96G28 342 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 NRBP2Q9NSY0 501 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 JAG2Q9Y219 1238 aa12.98□□□□□ -0.33
SRRM4-201ENST00000267260 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 GOLGA8RI6L899 631 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 MECOMQ03112 1051 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 MPP6Q9NZW5 540 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 PRAG1Q86YV5 1406 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 KRT37O76014 449 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 DR1Q01658 176 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 PPP6R3Q5H9R7 873 aaPredicted RBP12.97□□□□□ -0.33
SRRM4-201ENST00000267260 RINLQ6ZS11 566 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 ZFYVE1Q9HBF4 777 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 UHRF1BP1Q6BDS2 1440 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 SERPINB1P30740 379 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 CTDSPL2Q05D32 466 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 ALCAMQ13740 583 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 DCAF15Q66K64 600 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 DNAJC24Q6P3W2 148 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 DPP8Q6V1X1 898 aaPredicted RBP12.97□□□□□ -0.33
SRRM4-201ENST00000267260 PLD3Q8IV08 490 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 TEX14Q8IWB6 1497 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 PRPSAP2O60256 369 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 PPP6R2O75170 966 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 HSPA4LO95757 839 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 EDEM3Q9BZQ6 932 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 H0Y3Z8 333 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 VCAM1P19320 739 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 CNGA3Q16281 694 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 CATSPER3Q86XQ3 398 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 HSPD1P10809 573 aaKnown RBP12.97□□□□□ -0.33
SRRM4-201ENST00000267260 IMPG1Q17R60 797 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 PPP4R3CPQ6ZMV5 832 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 FANCLQ9NW38 375 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 ZYXQ15942 572 aaKnown RBP12.97□□□□□ -0.33
SRRM4-201ENST00000267260 NUGGCQ68CJ6 796 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 SLC30A9Q6PML9 568 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 GPIHBP1Q8IV16 184 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 TAGAPQ8N103 731 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 MAGEB5Q9BZ81 275 aa12.97□□□□□ -0.33
SRRM4-201ENST00000267260 FOXP1Q9H334 677 aaPredicted RBP12.97□□□□□ -0.33
SRRM4-201ENST00000267260 MYH7P12883 1935 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 SNX2O60749 519 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 MAN2A1Q16706 1144 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 FAM227BQ96M60 508 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 GINS4Q9BRT9 223 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 CNGB3Q9NQW8 809 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 BATF3Q9NR55 127 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 TNRQ92752 1358 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 ADCY3O60266 1144 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 KRT7P08729 469 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 CUL3Q13618 768 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 HIPK4Q8NE63 616 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 C2orf54Q08AI8 447 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 PTK2BQ14289 1009 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 PTPROQ16827 1216 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 ACBD5Q5T8D3 534 aaPredicted RBP12.96□□□□□ -0.33
SRRM4-201ENST00000267260 NAA35Q5VZE5 725 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 PPP4R4Q6NUP7 873 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 SLC35F6Q8N357 371 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 ADCY9O60503 1353 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 SHROOM2Q13796 1616 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 HNRNPDLO14979 420 aaKnown RBP12.96□□□□□ -0.33
SRRM4-201ENST00000267260 RNMTO43148 476 aaKnown RBP12.96□□□□□ -0.33
SRRM4-201ENST00000267260 FOSP01100 380 aaPredicted RBP12.96□□□□□ -0.33
SRRM4-201ENST00000267260 PPARAQ07869 468 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 NSMFQ6X4W1 530 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 EPM2AIP1Q7L775 607 aaPredicted RBP12.96□□□□□ -0.33
SRRM4-201ENST00000267260 ZFYVE19Q96K21 471 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.96□□□□□ -0.33
SRRM4-201ENST00000267260 MRGBPQ9NV56 204 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 PKD2L2Q9NZM6 624 aa12.96□□□□□ -0.33
SRRM4-201ENST00000267260 KRT1P04264 644 aa12.96□□□□□ -0.34
SRRM4-201ENST00000267260 HSPA1AP0DMV8 641 aaKnown RBP12.96□□□□□ -0.34
SRRM4-201ENST00000267260 HSPA1BP0DMV9 641 aaKnown RBP12.96□□□□□ -0.34
SRRM4-201ENST00000267260 CNBD2Q96M20 576 aa12.96□□□□□ -0.34
SRRM4-201ENST00000267260 GID8Q9NWU2 228 aa12.96□□□□□ -0.34
SRRM4-201ENST00000267260 RGS12O14924 1447 aa12.96□□□□□ -0.34
SRRM4-201ENST00000267260 CPA1P15085 419 aa12.96□□□□□ -0.34
SRRM4-201ENST00000267260 EFTUD2Q15029 972 aaKnown RBP eCLIP12.96□□□□□ -0.34
SRRM4-201ENST00000267260 HIF1AQ16665 826 aa12.96□□□□□ -0.34
SRRM4-201ENST00000267260 SLFNL1Q499Z3 407 aa12.96□□□□□ -0.34
SRRM4-201ENST00000267260 SCG3Q8WXD2 468 aaKnown RBP12.96□□□□□ -0.34
SRRM4-201ENST00000267260 GNPATO15228 680 aa12.95□□□□□ -0.34
SRRM4-201ENST00000267260 TFAP4Q01664 338 aa12.95□□□□□ -0.34
SRRM4-201ENST00000267260 CDC37Q16543 378 aaPredicted RBP12.95□□□□□ -0.34
SRRM4-201ENST00000267260 TGFBRAP1Q8WUH2 860 aa12.95□□□□□ -0.34
SRRM4-201ENST00000267260 PPARGC1AQ9UBK2 798 aaKnown RBP12.95□□□□□ -0.34
SRRM4-201ENST00000267260 MICAL3Q7RTP6 2002 aa12.95□□□□□ -0.34
SRRM4-201ENST00000267260 IKBKBO14920 756 aa12.95□□□□□ -0.34
SRRM4-201ENST00000267260 NR2F2P24468 414 aa12.95□□□□□ -0.34
SRRM4-201ENST00000267260 PANX2Q96RD6 677 aa12.95□□□□□ -0.34
SRRM4-201ENST00000267260 EML4Q9HC35 981 aaKnown RBP12.95□□□□□ -0.34
SRRM4-201ENST00000267260 SYTL2Q9HCH5 934 aa12.95□□□□□ -0.34
SRRM4-201ENST00000267260 MYH8P13535 1937 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms