RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 GPBP1Q86WP2 473 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 SIAH1Q8IUQ4 282 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 TSEN2Q8NCE0 465 aaKnown RBP13.7□□□□□ -0.22
BEST3-201ENST00000266661 CCDC17Q96LX7 622 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 INPP4AQ96PE3 977 aaPredicted RBP13.7□□□□□ -0.22
BEST3-201ENST00000266661 DHX36Q9H2U1 1008 aaKnown RBP13.7□□□□□ -0.22
BEST3-201ENST00000266661 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 NENFQ9UMX5 172 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 TRAF3IP3Q9Y228 551 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.7□□□□□ -0.22
BEST3-201ENST00000266661 MYH10P35580 1976 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 ADAMTSL1Q8N6G6 1762 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 A0A087X0T9 212 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 MYO1CO00159 1063 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 BUB1O43683 1085 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 FAM228BP0C875 321 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 ZBTB48P10074 688 aaPredicted RBP13.7□□□□□ -0.22
BEST3-201ENST00000266661 KLRC1P26715 233 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 MMP14P50281 582 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 EPHB4P54760 987 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 SLC7A5Q01650 507 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 NNTQ13423 1086 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 IRF2BP2Q7Z5L9 587 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 ZFPM1Q8IX07 1006 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 NELFCDQ8IXH7 590 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 LENG9Q96B70 501 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 MXD3Q9BW11 206 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 ANO3Q9BYT9 981 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 TANGO6Q9C0B7 1094 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 TSPYL1Q9H0U9 437 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 TAOK3Q9H2K8 898 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 TBC1D7Q9P0N9 293 aa13.7□□□□□ -0.22
BEST3-201ENST00000266661 RRP15Q9Y3B9 282 aaKnown RBP13.7□□□□□ -0.22
BEST3-201ENST00000266661 GOLGA6BA6NDN3 693 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 BHMG1C9JSJ3 638 aaPredicted RBP13.69□□□□□ -0.22
BEST3-201ENST00000266661 PALMO75781 387 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 SPATA31C1P0DKV0 1188 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 MYBP10242 640 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 PAFAH1B1P43034 410 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 CASP5P51878 434 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 NFIAQ12857 509 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 GIT2Q14161 759 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 HERC4Q5GLZ8 1057 aaPredicted RBP13.69□□□□□ -0.22
BEST3-201ENST00000266661 TBC1D5Q92609 795 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 MS4A14Q96JA4 679 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 TRERF1Q96PN7 1200 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 HINFPQ9BQA5 517 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 PLCB1Q9NQ66 1216 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 NYAP2Q9P242 653 aa13.69□□□□□ -0.22
BEST3-201ENST00000266661 SCN9AQ15858 1988 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 MYH4Q9Y623 1939 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 GRID2IPA4D2P6 1211 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 TBX3O15119 743 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 GRIN3BO60391 1043 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 PPFIA4O75335 1185 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 STAT3P40763 770 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 MRPS25P82663 173 aaKnown RBP13.68□□□□□ -0.22
BEST3-201ENST00000266661 CACNB1Q02641 598 aaPredicted RBP13.68□□□□□ -0.22
BEST3-201ENST00000266661 KCNH2Q12809 1159 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 ADAM9Q13443 819 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 AOC3Q16853 763 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 Q4G0T1 1027 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 CFAP221Q4G0U5 840 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 TDRD12Q587J7 1177 aaKnown RBP13.68□□□□□ -0.22
BEST3-201ENST00000266661 ALS2CLQ60I27 953 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 CATSPER3Q86XQ3 398 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 SLFN12Q8IYM2 578 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 DCAF4Q8WV16 495 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 PSMB7Q99436 277 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 KANSL2Q9H9L4 492 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 TMEM59LQ9UK28 342 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 ATP8B3O60423 1300 aa13.68□□□□□ -0.22
BEST3-201ENST00000266661 F8W031 263 aaPredicted RBP13.67□□□□□ -0.22
BEST3-201ENST00000266661 CES2O00748 559 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 SSBP05455 408 aaKnown RBP eCLIP13.67□□□□□ -0.22
BEST3-201ENST00000266661 GLI1P08151 1106 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 AP3B2Q13367 1082 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 BMT2Q1RMZ1 405 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 FRMD5Q7Z6J6 570 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 RTKN2Q8IZC4 609 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 IQCKQ8N0W5 287 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 SYT2Q8N9I0 419 aaPredicted RBP13.67□□□□□ -0.22
BEST3-201ENST00000266661 PACSIN1Q9BY11 444 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 TMX4Q9H1E5 349 aaPredicted RBP13.67□□□□□ -0.22
BEST3-201ENST00000266661 PCDHA1Q9Y5I3 950 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 POTEFA5A3E0 1075 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 GOLGA8KD6RF30 607 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 CETN3O15182 167 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 POTEIP0CG38 1075 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 EEF2P13639 858 aaKnown RBP13.67□□□□□ -0.22
BEST3-201ENST00000266661 RPA1P27694 616 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 CIITAP33076 1130 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 PSMC6P62333 389 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 ARHGAP4P98171 946 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 DOK7Q18PE1 504 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 SHROOM1Q2M3G4 852 aaPredicted RBP13.67□□□□□ -0.22
BEST3-201ENST00000266661 CCDC181Q5TID7 509 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 POTEGQ6S5H5 508 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 POTEEQ6S8J3 1075 aa13.67□□□□□ -0.22
BEST3-201ENST00000266661 MREGQ8N565 214 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms