RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 LIG1P18858 919 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 U2AF2P26368 475 aaKnown RBP eCLIP14.27□□□□□ -0.124e-7■■□□□ 11.5
SGCE-201ENST00000265735 STK38Q15208 465 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 NONOQ15233 471 aaKnown RBP eCLIP14.27□□□□□ -0.12
SGCE-201ENST00000265735 MOXD1Q6UVY6 613 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 OXER1Q8TDS5 423 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 PPP1R13LQ8WUF5 828 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 BADQ92934 168 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 TNFRSF25Q93038 417 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 MBOAT7Q96N66 472 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 CTAGE1Q96RT6 745 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 LBHD1Q9BQE6 289 aaPredicted RBP14.27□□□□□ -0.12
SGCE-201ENST00000265735 SDF4Q9BRK5 362 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 PANK2Q9BZ23 570 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 JPH1Q9HDC5 661 aaPredicted RBP14.27□□□□□ -0.12
SGCE-201ENST00000265735 HDAC6Q9UBN7 1215 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 SLC9A2Q9UBY0 812 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 GTF2IRD1Q9UHL9 959 aa14.27□□□□□ -0.12
SGCE-201ENST00000265735 A0A1W2PPC1 479 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 IPO5O00410 1097 aaKnown RBP14.26□□□□□ -0.13
SGCE-201ENST00000265735 ATG7O95352 703 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 MMP1P03956 469 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 HOXC8P31273 242 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 TCF7P36402 384 aaPredicted RBP14.26□□□□□ -0.13
SGCE-201ENST00000265735 ME1P48163 572 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 SF3A1Q15459 793 aaKnown RBP14.26□□□□□ -0.13
SGCE-201ENST00000265735 Q4G0T1 1027 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 PRR16Q569H4 304 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 FAM47CQ5HY64 1035 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 GDF6Q6KF10 455 aaPredicted RBP14.26□□□□□ -0.13
SGCE-201ENST00000265735 LGR5O75473 907 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 SP4Q02446 784 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 MFSD5Q6N075 450 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 C7orf31Q8N865 590 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 LINC00301Q8NCQ3 95 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 ZNF577Q9BSK1 485 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 NOC4LQ9BVI4 516 aaKnown RBP14.26□□□□□ -0.13
SGCE-201ENST00000265735 FTOQ9C0B1 505 aaKnown RBP eCLIP14.26□□□□□ -0.13
SGCE-201ENST00000265735 TBC1D22BQ9NU19 505 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 DACT1Q9NYF0 836 aa14.26□□□□□ -0.13
SGCE-201ENST00000265735 TRIP12Q14669 1992 aaPredicted RBP14.26□□□□□ -0.13
SGCE-201ENST00000265735 RANBP2P49792 3224 aaKnown RBP14.26□□□□□ -0.13
SGCE-201ENST00000265735 EMSYQ7Z589 1322 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 IGKV6D-21A0A0A0MT36 114 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 CCDC194A0A1B0GVG4 234 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 CCNE2O96020 404 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 KRT2P35908 639 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 ACTR2P61160 394 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 NR5A1Q13285 461 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 HIC1Q14526 733 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 INF2Q27J81 1249 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 EARS2Q5JPH6 523 aaKnown RBP14.25□□□□□ -0.13
SGCE-201ENST00000265735 CCDC73Q6ZRK6 1079 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 TRIM50Q86XT4 487 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 PCYT2Q99447 389 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 UBE2OQ9C0C9 1292 aaKnown RBP14.25□□□□□ -0.13
SGCE-201ENST00000265735 TNMDQ9H2S6 317 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 FOXP1Q9H334 677 aaPredicted RBP14.25□□□□□ -0.13
SGCE-201ENST00000265735 HIPK3Q9H422 1215 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 CLSTN2Q9H4D0 955 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 CLIC4Q9Y696 253 aa14.25□□□□□ -0.13
SGCE-201ENST00000265735 A0A1W2PQ27 194 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 A0A1W2PQ64 194 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 A0A1W2PQD8 194 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 BTBD18B2RXH4 712 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 SPTLC2O15270 562 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 MSH4O15457 936 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 TDP2O95551 362 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 CYP2C9P11712 490 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 CHMP4BP1P59074 171 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 PTGISQ16647 500 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 HABP4Q5JVS0 413 aaKnown RBP14.24□□□□□ -0.13
SGCE-201ENST00000265735 UTP14CQ5TAP6 766 aaKnown RBP14.24□□□□□ -0.13
SGCE-201ENST00000265735 ADALQ6DHV7 355 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 PPP4R3AQ6IN85 833 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 PIK3AP1Q6ZUJ8 805 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 NEK8Q86SG6 692 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 DIS3L2Q8IYB7 885 aaKnown RBP14.24□□□□□ -0.13
SGCE-201ENST00000265735 RNPEPQ9H4A4 650 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 SMARCAD1Q9H4L7 1026 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 BRMS1Q9HCU9 246 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 ZNF215Q9UL58 517 aaPredicted RBP14.24□□□□□ -0.13
SGCE-201ENST00000265735 UMODL1Q5DID0 1318 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 WDR81Q562E7 1941 aa14.24□□□□□ -0.13
SGCE-201ENST00000265735 SMIM10L2AP0DMW4 78 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 SMIM10L2BP0DMW5 78 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 ADAM17P78536 824 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 RBL2Q08999 1139 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 CCDC173Q0VFZ6 552 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 ABHD15Q6UXT9 468 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 NOSTRINQ8IVI9 506 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 SLC5A5Q92911 643 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 RIT2Q99578 217 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 PPP1R12CQ9BZL4 782 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 WNT8AQ9H1J5 351 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 ERAP1Q9NZ08 941 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 PITPNM1O00562 1244 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 NR1I2O75469 434 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 CCDC192P0DO97 292 aa14.23□□□□□ -0.13
SGCE-201ENST00000265735 GCFC2P16383 781 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms