RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 DLATP10515 647 aaKnown RBP21.65■■□□□ 1.06
CSPG5-201ENST00000264723 ARHGAP25P42331 645 aa21.65■■□□□ 1.06
CSPG5-201ENST00000264723 ALKBH5Q6P6C2 394 aaKnown RBP21.65■■□□□ 1.06
CSPG5-201ENST00000264723 GLIS3Q8NEA6 775 aa21.65■■□□□ 1.06
CSPG5-201ENST00000264723 UTP11Q9Y3A2 253 aaKnown RBP21.65■■□□□ 1.06
CSPG5-201ENST00000264723 KRT14P02533 472 aa21.65■■□□□ 1.06
CSPG5-201ENST00000264723 GBP6Q6ZN66 633 aa21.65■■□□□ 1.06
CSPG5-201ENST00000264723 IFT74Q96LB3 600 aa21.65■■□□□ 1.06
CSPG5-201ENST00000264723 KCND1Q9NSA2 647 aa21.65■■□□□ 1.06
CSPG5-201ENST00000264723 ANKRD62A6NC57 917 aa21.65■■□□□ 1.06
CSPG5-201ENST00000264723 VIMP08670 466 aaKnown RBP21.65■■□□□ 1.06
CSPG5-201ENST00000264723 LRRC63Q05C16 580 aa21.65■■□□□ 1.06
CSPG5-201ENST00000264723 SFR1Q86XK3 245 aa21.65■■□□□ 1.06
CSPG5-201ENST00000264723 NUDT12Q9BQG2 462 aa21.65■■□□□ 1.06
CSPG5-201ENST00000264723 SEMA6BQ9H3T3 888 aa21.65■■□□□ 1.06
CSPG5-201ENST00000264723 RBM12Q9NTZ6 932 aaKnown RBP21.65■■□□□ 1.06
CSPG5-201ENST00000264723 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.65■■□□□ 1.06
CSPG5-201ENST00000264723 ZNF543Q08ER8 600 aa21.64■■□□□ 1.06
CSPG5-201ENST00000264723 FUT2Q10981 343 aa21.64■■□□□ 1.06
CSPG5-201ENST00000264723 SLC30A10Q6XR72 485 aa21.64■■□□□ 1.06
CSPG5-201ENST00000264723 CCNI2Q6ZMN8 369 aaPredicted RBP21.64■■□□□ 1.06
CSPG5-201ENST00000264723 C16orf86Q6ZW13 317 aa21.64■■□□□ 1.06
CSPG5-201ENST00000264723 ARFGAP2Q8N6H7 521 aa21.64■■□□□ 1.06
CSPG5-201ENST00000264723 NUCKS1Q9H1E3 243 aaKnown RBP21.64■■□□□ 1.06
CSPG5-201ENST00000264723 KCNK9Q9NPC2 374 aa21.64■■□□□ 1.06
CSPG5-201ENST00000264723 RCCD1A6NED2 376 aa21.64■■□□□ 1.05
CSPG5-201ENST00000264723 BUB1BO60566 1050 aaPredicted RBP21.64■■□□□ 1.05
CSPG5-201ENST00000264723 MGARPQ8TDB4 240 aa21.64■■□□□ 1.05
CSPG5-201ENST00000264723 HOOK2Q96ED9 719 aa21.64■■□□□ 1.05
CSPG5-201ENST00000264723 SPZ1Q9BXG8 430 aa21.64■■□□□ 1.05
CSPG5-201ENST00000264723 DDX47Q9H0S4 455 aaKnown RBP21.64■■□□□ 1.05
CSPG5-201ENST00000264723 PDS5AQ29RF7 1337 aaKnown RBP21.64■■□□□ 1.05
CSPG5-201ENST00000264723 SERPING1P05155 500 aa21.64■■□□□ 1.05
CSPG5-201ENST00000264723 IFT88Q13099 833 aa21.64■■□□□ 1.05
CSPG5-201ENST00000264723 EEPD1Q7L9B9 569 aa21.64■■□□□ 1.05
CSPG5-201ENST00000264723 ANKRD35Q8N283 1001 aa21.64■■□□□ 1.05
CSPG5-201ENST00000264723 PPM1KQ8N3J5 372 aa21.64■■□□□ 1.05
CSPG5-201ENST00000264723 CABS1Q96KC9 395 aa21.64■■□□□ 1.05
CSPG5-201ENST00000264723 TSKSQ9UJT2 592 aa21.64■■□□□ 1.05
CSPG5-201ENST00000264723 PHLDB2Q86SQ0 1253 aa21.63■■□□□ 1.05
CSPG5-201ENST00000264723 KBTBD4Q9NVX7 518 aa21.63■■□□□ 1.05
CSPG5-201ENST00000264723 GCNT4Q9P109 453 aa21.63■■□□□ 1.05
CSPG5-201ENST00000264723 AMFRQ9UKV5 643 aa21.63■■□□□ 1.05
CSPG5-201ENST00000264723 NOP56O00567 594 aaKnown RBP21.63■■□□□ 1.05
CSPG5-201ENST00000264723 GNA14O95837 355 aa21.63■■□□□ 1.05
CSPG5-201ENST00000264723 GUF1Q8N442 669 aaKnown RBP21.63■■□□□ 1.05
CSPG5-201ENST00000264723 DUSP9Q99956 384 aaKnown RBP21.63■■□□□ 1.05
CSPG5-201ENST00000264723 TAOK3Q9H2K8 898 aa21.63■■□□□ 1.05
CSPG5-201ENST00000264723 ATP8A1Q9Y2Q0 1164 aa21.63■■□□□ 1.05
CSPG5-201ENST00000264723 GOLGA8KD6RF30 607 aa21.63■■□□□ 1.05
CSPG5-201ENST00000264723 TNNI1P19237 187 aa21.63■■□□□ 1.05
CSPG5-201ENST00000264723 PPP1R7Q15435 360 aa21.63■■□□□ 1.05
CSPG5-201ENST00000264723 GLG1Q92896 1179 aa21.63■■□□□ 1.05
CSPG5-201ENST00000264723 hCG_1984214I3L0E3 225 aa21.62■■□□□ 1.05
CSPG5-201ENST00000264723 PSMD14O00487 310 aa21.62■■□□□ 1.05
CSPG5-201ENST00000264723 MKRN4PQ13434 485 aaPredicted RBP21.62■■□□□ 1.05
CSPG5-201ENST00000264723 NAALADL2Q58DX5 795 aa21.62■■□□□ 1.05
CSPG5-201ENST00000264723 TRAPPC11Q7Z392 1133 aa21.62■■□□□ 1.05
CSPG5-201ENST00000264723 ZNF713Q8N859 430 aaPredicted RBP21.62■■□□□ 1.05
CSPG5-201ENST00000264723 ZMYND12Q9H0C1 365 aa21.62■■□□□ 1.05
CSPG5-201ENST00000264723 HPCAL4Q9UM19 191 aa21.62■■□□□ 1.05
CSPG5-201ENST00000264723 TAL1P17542 331 aaPredicted RBP21.62■■□□□ 1.05
CSPG5-201ENST00000264723 CIAPIN1Q6FI81 312 aa21.62■■□□□ 1.05
CSPG5-201ENST00000264723 LRRC45Q96CN5 670 aa21.62■■□□□ 1.05
CSPG5-201ENST00000264723 LCMT1Q9UIC8 334 aa21.62■■□□□ 1.05
CSPG5-201ENST00000264723 CARSP49589 748 aaKnown RBP21.62■■□□□ 1.05
CSPG5-201ENST00000264723 IRX3P78415 501 aaPredicted RBP21.62■■□□□ 1.05
CSPG5-201ENST00000264723 COL23A1Q86Y22 540 aaPredicted RBP21.62■■□□□ 1.05
CSPG5-201ENST00000264723 PLCD4Q9BRC7 762 aa21.62■■□□□ 1.05
CSPG5-201ENST00000264723 ARHGAP20Q9P2F6 1191 aa21.62■■□□□ 1.05
CSPG5-201ENST00000264723 SPATA31A6Q5VVP1 1343 aa21.61■■□□□ 1.05
CSPG5-201ENST00000264723 ANO9A1A5B4 782 aa21.61■■□□□ 1.05
CSPG5-201ENST00000264723 PPFIA4O75335 1185 aa21.61■■□□□ 1.05
CSPG5-201ENST00000264723 AFPP02771 609 aaKnown RBP21.61■■□□□ 1.05
CSPG5-201ENST00000264723 C7orf25Q9BPX7 421 aa21.61■■□□□ 1.05
CSPG5-201ENST00000264723 RGL1Q9NZL6 768 aa21.61■■□□□ 1.05
CSPG5-201ENST00000264723 ZSCAN5CA6NGD5 496 aaPredicted RBP21.61■■□□□ 1.05
CSPG5-201ENST00000264723 SHISA4Q96DD7 197 aa21.61■■□□□ 1.05
CSPG5-201ENST00000264723 PTPN22Q9Y2R2 807 aa21.61■■□□□ 1.05
CSPG5-201ENST00000264723 NDUFB10O96000 172 aa21.61■■□□□ 1.05
CSPG5-201ENST00000264723 B4GALNT4Q76KP1 1039 aa21.61■■□□□ 1.05
CSPG5-201ENST00000264723 DDX42Q86XP3 938 aaKnown RBP eCLIP21.61■■□□□ 1.05
CSPG5-201ENST00000264723 PDE2AO00408 941 aaPredicted RBP21.6■■□□□ 1.05
CSPG5-201ENST00000264723 SLC9A1P19634 815 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 GRB10Q13322 594 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 WDR44Q5JSH3 913 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 PVALEFA0A1B0GWK0 134 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 EPHB6O15197 1021 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 ADCY1Q08828 1119 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 STRN3Q13033 797 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 ZNF211Q13398 564 aaPredicted RBP21.6■■□□□ 1.05
CSPG5-201ENST00000264723 IRF2BP1Q8IU81 584 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 CCDC105Q8IYK2 499 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 FAM186BQ8IYM0 893 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 KIAA0895Q8NCT3 520 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 KLRC1P26715 233 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 SLCO1A2P46721 670 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 IFNAR2P48551 515 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 PPP4CP60510 307 aa21.6■■□□□ 1.05
CSPG5-201ENST00000264723 GRIPAP1Q4V328 841 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms