RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PDXDC2PQ6P474 469 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 TMTC3Q6ZXV5 915 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 Q9H521 79 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 MED4Q9NPJ6 270 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 ANXA13P27216 316 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 EPHB4P54760 987 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 CYP27A1Q02318 531 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 MYO1EQ12965 1108 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 SPOPLQ6IQ16 392 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 SCYL3Q8IZE3 742 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 THAP9Q9H5L6 903 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 RPF1Q9H9Y2 349 aaKnown RBP13.06□□□□□ -0.32
COL8A1-201ENST00000261037 RPSAP08865 295 aaKnown RBP13.06□□□□□ -0.32
COL8A1-201ENST00000261037 GCFC2P16383 781 aaKnown RBP13.06□□□□□ -0.32
COL8A1-201ENST00000261037 HAUS8Q9BT25 410 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 ARHGAP31Q2M1Z3 1444 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 NEDD4P46934 1319 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 SERPING1P05155 500 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 SUDS3Q9H7L9 328 aaPredicted RBP13.06□□□□□ -0.32
COL8A1-201ENST00000261037 PI4KBQ9UBF8 816 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 IGSF1Q8N6C5 1336 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 PNMA6FA0A0J9YX94 578 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 MAP2K2P36507 400 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 PEX3P56589 373 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 RWDD4Q6NW29 188 aaKnown RBP13.06□□□□□ -0.32
COL8A1-201ENST00000261037 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 JPH2Q9BR39 696 aaPredicted RBP13.06□□□□□ -0.32
COL8A1-201ENST00000261037 SPZ1Q9BXG8 430 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 CPVLQ9H3G5 476 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 GJB4Q9NTQ9 266 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 SLC12A6Q9UHW9 1150 aa13.06□□□□□ -0.32
COL8A1-201ENST00000261037 NOC2LQ9Y3T9 749 aaKnown RBP13.06□□□□□ -0.32
COL8A1-201ENST00000261037 F5H423 210 aaPredicted RBP13.05□□□□□ -0.32
COL8A1-201ENST00000261037 IKBKBO14920 756 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 MXI1P50539 228 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 KRT27Q7Z3Y8 459 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 CXorf38Q8TB03 319 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 PIGBQ92521 554 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 POLD4Q9HCU8 107 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 GINM1Q9NU53 330 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 INTUQ9ULD6 942 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 ABT1Q9ULW3 272 aaKnown RBP13.05□□□□□ -0.32
COL8A1-201ENST00000261037 USP17L5A8MUK1 530 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 BBOX1O75936 387 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 RXRBP28702 533 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 SOX5P35711 763 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 FKBP3Q00688 224 aaKnown RBP13.05□□□□□ -0.32
COL8A1-201ENST00000261037 ZNF394Q53GI3 561 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 RNF217Q8TC41 542 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 RABGGTAQ92696 567 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 NCAPGQ9BPX3 1015 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.05□□□□□ -0.32
COL8A1-201ENST00000261037 RNF123Q5XPI4 1314 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 MT-ND3P03897 115 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 RESTQ13127 1097 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 DSTYKQ6XUX3 929 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 PPWD1Q96BP3 646 aaKnown RBP13.05□□□□□ -0.32
COL8A1-201ENST00000261037 SRPRBQ9Y5M8 271 aaKnown RBP13.05□□□□□ -0.32
COL8A1-201ENST00000261037 PLA2R1Q13018 1463 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 NCF2P19878 526 aaPredicted RBP13.05□□□□□ -0.32
COL8A1-201ENST00000261037 CASP1P29466 404 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 RMDN2Q96LZ7 410 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 HEG1Q9ULI3 1381 aa13.05□□□□□ -0.32
COL8A1-201ENST00000261037 GCKP35557 465 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 GRAPQ13588 217 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 FAM83BQ5T0W9 1011 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 PASD1Q8IV76 773 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 TTC30BQ8N4P2 665 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 SPDYE1Q8NFV5 336 aaPredicted RBP13.04□□□□□ -0.32
COL8A1-201ENST00000261037 GRAPLQ8TC17 118 aaPredicted RBP13.04□□□□□ -0.32
COL8A1-201ENST00000261037 THOC1Q96FV9 657 aaKnown RBP13.04□□□□□ -0.32
COL8A1-201ENST00000261037 ABCB11O95342 1321 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 FAM196BA6NMK8 535 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 C21orf2O43822 256 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 MGEA5O60502 916 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 MCAMP43121 646 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 INPP1P49441 399 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 BBS9Q3SYG4 887 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 SPATA17Q96L03 361 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 MRPL47Q9HD33 250 aaKnown RBP13.04□□□□□ -0.32
COL8A1-201ENST00000261037 ANLNQ9NQW6 1124 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 TLK1Q9UKI8 766 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 ATP8B3O60423 1300 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 hCG_1984214I3L0E3 225 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 NMT2O60551 498 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 DR1Q01658 176 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 APBA1Q02410 837 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 HLFQ16534 295 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 ZNF713Q8N859 430 aaPredicted RBP13.04□□□□□ -0.32
COL8A1-201ENST00000261037 OR6B3Q8NGW1 331 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL8A1-201ENST00000261037 MAP3K4Q9Y6R4 1608 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 SASH1O94885 1247 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 EPHB1P54762 984 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 PHEXP78562 749 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 DALRD3Q5D0E6 543 aaKnown RBP13.04□□□□□ -0.32
COL8A1-201ENST00000261037 HABP4Q5JVS0 413 aaKnown RBP13.04□□□□□ -0.32
COL8A1-201ENST00000261037 RNF207Q6ZRF8 634 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 TTC30AQ86WT1 665 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 VSTM4Q8IW00 320 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms