RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 TGS1Q96RS0 853 aaKnown RBP10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 PHF20L1A8MW92 1017 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 PPP1R37O75864 691 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 NSFP46459 744 aaKnown RBP10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 RAPH1Q70E73 1250 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 DTX3LQ8TDB6 740 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 HDAC11Q96DB2 347 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 CFAP36Q96G28 342 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 LRRC37BQ96QE4 947 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 LRRC1Q9BTT6 524 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 TMEM60Q9H2L4 133 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 TMEM51Q9NW97 253 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 PCDHA1Q9Y5I3 950 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 YEATS2Q9ULM3 1422 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 RASA4BC9J798 803 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 RASA4O43374 803 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 SUPT3HO75486 399 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 SLC16A2P36021 539 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 ECE1P42892 770 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 EPHB1P54762 984 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 CDR2Q01850 454 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 RFX6Q8HWS3 928 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 MARCH10Q8NA82 808 aaPredicted RBP10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 IWS1Q96ST2 819 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 DDX47Q9H0S4 455 aaKnown RBP10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 CFAP73A6NFT4 308 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 USP17L8P0C7I0 530 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 TMOD1P28289 359 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 BASP1P80723 227 aaKnown RBP10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 ART3Q13508 389 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 RASGRF1Q13972 1273 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 ODR4Q5SWX8 454 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 NAIF1Q69YI7 327 aaPredicted RBP10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 KCTD1Q719H9 257 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 CALR3Q96L12 384 aaKnown RBP10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 MMS19Q96T76 1030 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 PALMDQ9NP74 551 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 GCNT4Q9P109 453 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 MED14O60244 1454 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 USP17L3A6NCW0 530 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 USP17L4A6NCW7 530 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 GNGT2O14610 69 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 MDH1P40925 334 aaKnown RBP10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 PLA2G4AP47712 749 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 UBXN2AP68543 259 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 USP17L1Q7RTZ2 530 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 STRBPQ96SI9 672 aaKnown RBP10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 SLC40A1Q9NP59 571 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 ZC4H2Q9NQZ6 224 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 KRT82Q9NSB4 513 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 GINM1Q9NU53 330 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 LRRC7Q96NW7 1537 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 MAP3K4Q9Y6R4 1608 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 STXBP3O00186 592 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 KRT14P02533 472 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 PMS2P54278 862 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 SPARCL1Q14515 664 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 MUM1L1Q5H9M0 696 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 SH2D4AQ9H788 454 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 ZBTB1Q9Y2K1 713 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 ESYT2A0FGR8 921 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 MCF2P10911 925 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 PSMC1P62191 440 aaKnown RBP10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 PRMT1Q99873 361 aaKnown RBP10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 C1orf112Q9NSG2 853 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 GEMIN8Q9NWZ8 242 aaKnown RBP10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 RHBDL2Q9NX52 303 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 PARP3Q9Y6F1 533 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 SHROOM2Q13796 1616 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 ABCA8O94911 1581 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 TTC26A0AVF1 554 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 EPM2AIP1Q7L775 607 aaPredicted RBP10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 TRIM55Q9BYV6 548 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 PCIF1Q9H4Z3 704 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 FBXL5Q9UKA1 691 aa10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 TRPC5Q9UL62 973 aaPredicted RBP10.5□□□□□ -0.73
CTDSPL2-201ENST00000260327 LAMC1P11047 1609 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 CLTCL1P53675 1640 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 TRIM42Q8IWZ5 723 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 HPCAL4Q9UM19 191 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 TRIM37O94972 964 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 DDIT3P35638 169 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 SEC24CP53992 1094 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 CUL3Q13618 768 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 BBS9Q3SYG4 887 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 FAM186BQ8IYM0 893 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 KIF2BQ8N4N8 673 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 SNRNP27Q8WVK2 155 aaKnown RBP10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 EMILIN3Q9NT22 766 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 CFAP74Q9C0B2 1584 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 LGALS16A8MUM7 142 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 WDR46O15213 610 aaKnown RBP10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 HAUS5O94927 633 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 PCP11498 1178 aaKnown RBP10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 SLC8A3P57103 927 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 METTL16Q86W50 562 aaKnown RBP10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 GARSP41250 739 aaKnown RBP10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 UBE2SQ16763 222 aa10.49□□□□□ -0.73
CTDSPL2-201ENST00000260327 HP1BP3Q5SSJ5 553 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms