RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 DDX25Q9UHL0 483 aaKnown RBP27.55■■■□□ 2
SDF2L1-201ENST00000248958 KIF3AQ9Y496 699 aa27.55■■■□□ 2
SDF2L1-201ENST00000248958 GAS7O60861 476 aa27.54■■■□□ 2
SDF2L1-201ENST00000248958 SELPP16109 830 aa27.54■■■□□ 2
SDF2L1-201ENST00000248958 MYH9P35579 1960 aaKnown RBP27.54■■■□□ 2
SDF2L1-201ENST00000248958 RANBP2P49792 3224 aaKnown RBP27.54■■■□□ 2
SDF2L1-201ENST00000248958 ADAM17P78536 824 aa27.54■■■□□ 2
SDF2L1-201ENST00000248958 ZNF200P98182 395 aaPredicted RBP27.54■■■□□ 2
SDF2L1-201ENST00000248958 HIC1Q14526 733 aa27.54■■■□□ 2
SDF2L1-201ENST00000248958 C16orf59Q7L2K0 433 aa27.54■■■□□ 2
SDF2L1-201ENST00000248958 DIS3L2Q8IYB7 885 aaKnown RBP27.54■■■□□ 2
SDF2L1-201ENST00000248958 TNFRSF25Q93038 417 aa27.54■■■□□ 2
SDF2L1-201ENST00000248958 PCDHA10Q9Y5I2 948 aa27.54■■■□□ 2
SDF2L1-201ENST00000248958 RRN3P2A6NIE6 340 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 BACH1O14867 736 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 TREHO43280 583 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 CAND2O75155 1236 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 FGBP02675 491 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 PSAPP07602 524 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 CKBP12277 381 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 MARK3P27448 753 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 SFNP31947 248 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 PPFIA1Q13136 1202 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 NR5A1Q13285 461 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 LRCH2Q5VUJ6 765 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 ZNF365Q70YC5 407 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 LRRC8DQ7L1W4 858 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 LMBR1Q8WVP7 490 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 TMX3Q96JJ7 454 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 ZNF302Q9NR11 478 aa27.53■■■□□ 2
SDF2L1-201ENST00000248958 SCN5AQ14524 2016 aa27.52■■■□□ 2
SDF2L1-201ENST00000248958 WDR64B1ANS9 1081 aa27.52■■■□□ 2
SDF2L1-201ENST00000248958 BTBD18B2RXH4 712 aa27.52■■■□□ 2
SDF2L1-201ENST00000248958 ACRP10323 421 aa27.52■■■□□ 2
SDF2L1-201ENST00000248958 TRIM71Q2Q1W2 868 aaKnown RBP27.52■■■□□ 2
SDF2L1-201ENST00000248958 GPR153Q6NV75 609 aa27.52■■■□□ 2
SDF2L1-201ENST00000248958 RDM1Q8NG50 284 aa27.52■■■□□ 2
SDF2L1-201ENST00000248958 SAMM50Q9Y512 469 aa27.52■■■□□ 2
SDF2L1-201ENST00000248958 WDR81Q562E7 1941 aa27.51■■■□□ 2
SDF2L1-201ENST00000248958 TBX3O15119 743 aa27.51■■□□□ 1.99
SDF2L1-201ENST00000248958 CCNT1O60563 726 aaKnown RBP27.51■■□□□ 1.99
SDF2L1-201ENST00000248958 RPLP2P05387 115 aaKnown RBP27.51■■□□□ 1.99
SDF2L1-201ENST00000248958 JAK3P52333 1124 aa27.51■■□□□ 1.99
SDF2L1-201ENST00000248958 FOSBP53539 338 aa27.51■■□□□ 1.99
SDF2L1-201ENST00000248958 PLCB4Q15147 1175 aa27.51■■□□□ 1.99
SDF2L1-201ENST00000248958 GRIK4Q16099 956 aa27.51■■□□□ 1.99
SDF2L1-201ENST00000248958 TAF2Q6P1X5 1199 aa27.51■■□□□ 1.99
SDF2L1-201ENST00000248958 HERVK_113Q902F9 699 aa27.51■■□□□ 1.99
SDF2L1-201ENST00000248958 FAM20AQ96MK3 541 aa27.51■■□□□ 1.99
SDF2L1-201ENST00000248958 UIMC1Q96RL1 719 aa27.51■■□□□ 1.99
SDF2L1-201ENST00000248958 TRPC6Q9Y210 931 aa27.51■■□□□ 1.99
SDF2L1-201ENST00000248958 POTEB3A0JP26 581 aa27.5■■□□□ 1.99
SDF2L1-201ENST00000248958 PSMD10O75832 226 aa27.5■■□□□ 1.99
SDF2L1-201ENST00000248958 EARS2Q5JPH6 523 aaKnown RBP27.5■■□□□ 1.99
SDF2L1-201ENST00000248958 SWSAP1Q6NVH7 229 aa27.5■■□□□ 1.99
SDF2L1-201ENST00000248958 PDXDC2PQ6P474 469 aa27.5■■□□□ 1.99
SDF2L1-201ENST00000248958 POTEBQ6S5H4 581 aa27.5■■□□□ 1.99
SDF2L1-201ENST00000248958 CCDC60Q8IWA6 550 aaPredicted RBP27.5■■□□□ 1.99
SDF2L1-201ENST00000248958 FBXO18Q8NFZ0 1043 aa27.5■■□□□ 1.99
SDF2L1-201ENST00000248958 ETNPPLQ8TBG4 499 aa27.5■■□□□ 1.99
SDF2L1-201ENST00000248958 MAFBQ9Y5Q3 323 aaPredicted RBP27.5■■□□□ 1.99
SDF2L1-201ENST00000248958 HBP1O60381 514 aa27.49■■□□□ 1.99
SDF2L1-201ENST00000248958 ACTN1P12814 892 aa27.49■■□□□ 1.99
SDF2L1-201ENST00000248958 INSRRP14616 1297 aa27.49■■□□□ 1.99
SDF2L1-201ENST00000248958 RASIP1Q5U651 963 aa27.49■■□□□ 1.99
SDF2L1-201ENST00000248958 DISC1Q9NRI5 854 aa27.49■■□□□ 1.99
SDF2L1-201ENST00000248958 TUBE1Q9UJT0 475 aa27.49■■□□□ 1.99
SDF2L1-201ENST00000248958 SZT2Q5T011 3432 aa27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 MBLAC1A4D2B0 266 aaPredicted RBP27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 SOX1O00570 391 aaPredicted RBP27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 SLC37A4O43826 429 aa27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 CD2BP2O95400 341 aaKnown RBP27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 THPOP40225 353 aa27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 ZNF618Q5T7W0 954 aa27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 DEFB128Q7Z7B8 93 aa27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 RPAINQ86UA6 219 aa27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 ATP8B4Q8TF62 1192 aa27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 WNT8BQ93098 351 aa27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 FOXP1Q9H334 677 aaPredicted RBP27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 KCNMB3Q9NPA1 279 aa27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 COL1A2P08123 1366 aa27.48■■□□□ 1.99
SDF2L1-201ENST00000248958 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.47■■□□□ 1.99
SDF2L1-201ENST00000248958 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.47■■□□□ 1.99
SDF2L1-201ENST00000248958 BAG4O95429 457 aaKnown RBP27.47■■□□□ 1.99
SDF2L1-201ENST00000248958 SMAD3P84022 425 aaKnown RBP27.47■■□□□ 1.99
SDF2L1-201ENST00000248958 GUCY1B3Q02153 619 aa27.47■■□□□ 1.99
SDF2L1-201ENST00000248958 RSPH3Q86UC2 560 aa27.47■■□□□ 1.99
SDF2L1-201ENST00000248958 BBXQ8WY36 941 aaPredicted RBP27.47■■□□□ 1.99
SDF2L1-201ENST00000248958 FTOQ9C0B1 505 aaKnown RBP eCLIP27.47■■□□□ 1.991e-12■□□□□ 11.3
SDF2L1-201ENST00000248958 UNC45AQ9H3U1 944 aa27.47■■□□□ 1.99
SDF2L1-201ENST00000248958 GABBR1Q9UBS5 961 aa27.47■■□□□ 1.99
SDF2L1-201ENST00000248958 RSPH10B2B2RC85 870 aa27.46■■□□□ 1.99
SDF2L1-201ENST00000248958 MARCH6O60337 910 aa27.46■■□□□ 1.99
SDF2L1-201ENST00000248958 RSPH10BP0C881 870 aa27.46■■□□□ 1.99
SDF2L1-201ENST00000248958 ZNF484Q5JVG2 852 aa27.46■■□□□ 1.99
SDF2L1-201ENST00000248958 B3GNT9Q6UX72 402 aa27.46■■□□□ 1.99
SDF2L1-201ENST00000248958 MIER3Q7Z3K6 550 aa27.46■■□□□ 1.99
SDF2L1-201ENST00000248958 CKAP2LQ8IYA6 745 aa27.46■■□□□ 1.99
SDF2L1-201ENST00000248958 VWCEQ96DN2 955 aa27.46■■□□□ 1.99
SDF2L1-201ENST00000248958 LRCH3Q96II8 777 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms