RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 FAM26FQ5R3K3 315 aa16.92■□□□□ 0.3
HDHD3-201ENST00000238379 ZNF746Q6NUN9 644 aaPredicted RBP16.92■□□□□ 0.3
HDHD3-201ENST00000238379 FAM43AQ8N2R8 423 aa16.92■□□□□ 0.3
HDHD3-201ENST00000238379 GLIS3Q8NEA6 775 aa16.92■□□□□ 0.3
HDHD3-201ENST00000238379 ZSWIM4Q9H7M6 989 aa16.92■□□□□ 0.3
HDHD3-201ENST00000238379 KIAA1217Q5T5P2 1943 aa16.92■□□□□ 0.3
HDHD3-201ENST00000238379 QARSP47897 775 aaKnown RBP16.91■□□□□ 0.3
HDHD3-201ENST00000238379 HUNKP57058 714 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 KCTD2Q14681 263 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 CCDC144BQ3MJ40 725 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 HERC4Q5GLZ8 1057 aaPredicted RBP16.91■□□□□ 0.3
HDHD3-201ENST00000238379 ANKRD40Q6AI12 368 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 CENPPQ6IPU0 288 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 C1orf186Q6ZWK4 172 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 GPRC5AQ8NFJ5 357 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 RDM1Q8NG50 284 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 FGD4Q96M96 766 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 PTPN18Q99952 460 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 DUSP9Q99956 384 aaKnown RBP16.91■□□□□ 0.3
HDHD3-201ENST00000238379 PORCNQ9H237 461 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 SEMA6BQ9H3T3 888 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 BCAS3Q9H6U6 928 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 INTS13Q9NVM9 706 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.91■□□□□ 0.3
HDHD3-201ENST00000238379 BICDL2A1A5D9 508 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 ESPNB1AK53 854 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 PGK2P07205 417 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 SP2Q02086 613 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 CCDC186Q7Z3E2 898 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 ZSCAN30Q86W11 494 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 IRF2BP1Q8IU81 584 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 MMP19Q99542 508 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 TCEAL9Q9UHQ7 104 aa16.91■□□□□ 0.3
HDHD3-201ENST00000238379 LRRC10BA6NIK2 292 aa16.9■□□□□ 0.3
HDHD3-201ENST00000238379 TPM3P06753 285 aa16.9■□□□□ 0.3
HDHD3-201ENST00000238379 PTGS1P23219 599 aa16.9■□□□□ 0.3
HDHD3-201ENST00000238379 GCLCP48506 637 aaPredicted RBP16.9■□□□□ 0.3
HDHD3-201ENST00000238379 LRRC41Q15345 812 aa16.9■□□□□ 0.3
HDHD3-201ENST00000238379 UGCGQ16739 394 aa16.9■□□□□ 0.3
HDHD3-201ENST00000238379 TRIM47Q96LD4 638 aa16.9■□□□□ 0.3
HDHD3-201ENST00000238379 ZNF830Q96NB3 372 aaPredicted RBP16.9■□□□□ 0.3
HDHD3-201ENST00000238379 FGFBP2Q9BYJ0 223 aa16.9■□□□□ 0.3
HDHD3-201ENST00000238379 EFCC1Q9HA90 598 aa16.9■□□□□ 0.3
HDHD3-201ENST00000238379 KCND2Q9NZV8 630 aa16.9■□□□□ 0.3
HDHD3-201ENST00000238379 MORF4L1Q9UBU8 362 aa16.9■□□□□ 0.3
HDHD3-201ENST00000238379 ZKSCAN5Q9Y2L8 839 aa16.9■□□□□ 0.3
HDHD3-201ENST00000238379 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
HDHD3-201ENST00000238379 TRPM7Q96QT4 1865 aa16.9■□□□□ 0.3
HDHD3-201ENST00000238379 A0A1B0GTH6 734 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 C4orf19Q8IY42 314 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 ANKRD13CQ8N6S4 541 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 SRRTQ9BXP5 876 aaKnown RBP16.89■□□□□ 0.29
HDHD3-201ENST00000238379 ZHX3Q9H4I2 956 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 JPH1Q9HDC5 661 aaPredicted RBP16.89■□□□□ 0.29
HDHD3-201ENST00000238379 TBC1D7Q9P0N9 293 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 LIMA1Q9UHB6 759 aaKnown RBP16.89■□□□□ 0.29
HDHD3-201ENST00000238379 DBR1Q9UK59 544 aaKnown RBP16.89■□□□□ 0.29
HDHD3-201ENST00000238379 PCDHA10Q9Y5I2 948 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 RSPH10B2B2RC85 870 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 RSPH10BP0C881 870 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 PSMC5P62195 406 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 CCNA1P78396 465 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 SPAG1Q07617 926 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 NR1I3Q14994 352 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 TCP11X2Q5H9J9 407 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 WDR78Q5VTH9 848 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 SEPT14Q6ZU15 432 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 FILIP1Q7Z7B0 1213 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 SMAP1Q8IYB5 467 aaPredicted RBP16.89■□□□□ 0.29
HDHD3-201ENST00000238379 MYOCDQ8IZQ8 938 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 CSGALNACT2Q8N6G5 542 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 NOC3LQ8WTT2 800 aaKnown RBP16.89■□□□□ 0.29
HDHD3-201ENST00000238379 THAP9Q9H5L6 903 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 IMPACTQ9P2X3 320 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 SLC9A2Q9UBY0 812 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 TELO2Q9Y4R8 837 aa16.89■□□□□ 0.29
HDHD3-201ENST00000238379 ARHGEF35A5YM69 484 aa16.88■□□□□ 0.29
HDHD3-201ENST00000238379 B4DLN1 442 aa16.88■□□□□ 0.29
HDHD3-201ENST00000238379 KCNJ18B7U540 433 aa16.88■□□□□ 0.29
HDHD3-201ENST00000238379 KCNJ12Q14500 433 aa16.88■□□□□ 0.29
HDHD3-201ENST00000238379 KRT31Q15323 416 aa16.88■□□□□ 0.29
HDHD3-201ENST00000238379 FOXR2Q6PJQ5 311 aa16.88■□□□□ 0.29
HDHD3-201ENST00000238379 SFR1Q86XK3 245 aa16.88■□□□□ 0.29
HDHD3-201ENST00000238379 VSTM4Q8IW00 320 aa16.88■□□□□ 0.29
HDHD3-201ENST00000238379 CTAGE1Q96RT6 745 aa16.88■□□□□ 0.29
HDHD3-201ENST00000238379 KCNF1Q9H3M0 494 aa16.88■□□□□ 0.29
HDHD3-201ENST00000238379 COL4A3BPQ9Y5P4 624 aa16.88■□□□□ 0.29
HDHD3-201ENST00000238379 TBCAO75347 108 aaKnown RBP16.87■□□□□ 0.29
HDHD3-201ENST00000238379 GUCY2CP25092 1073 aa16.87■□□□□ 0.29
HDHD3-201ENST00000238379 YWHABP31946 246 aaKnown RBP16.87■□□□□ 0.29
HDHD3-201ENST00000238379 RARRES1P49788 294 aa16.87■□□□□ 0.29
HDHD3-201ENST00000238379 ACTR2P61160 394 aa16.87■□□□□ 0.29
HDHD3-201ENST00000238379 TMC6Q7Z403 805 aa16.87■□□□□ 0.29
HDHD3-201ENST00000238379 SAPCD2Q86UD0 394 aa16.87■□□□□ 0.29
HDHD3-201ENST00000238379 RASAL3Q86YV0 1011 aa16.87■□□□□ 0.29
HDHD3-201ENST00000238379 SCFD1Q8WVM8 642 aa16.87■□□□□ 0.29
HDHD3-201ENST00000238379 PARK7Q99497 189 aaKnown RBP16.87■□□□□ 0.29
HDHD3-201ENST00000238379 POLD4Q9HCU8 107 aa16.87■□□□□ 0.29
HDHD3-201ENST00000238379 LOXHD1Q8IVV2 1947 aa16.87■□□□□ 0.29
HDHD3-201ENST00000238379 LRRC37A2A6NM11 1700 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms