RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 KIAA0825Q8IV33 1275 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 CAGE1Q8TC20 777 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 WHAMMQ8TF30 809 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 DHRS1Q96LJ7 313 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 FAM81BQ96LP2 452 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 TSC22D3Q99576 134 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 STK17AQ9UEE5 414 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 PCDHA13Q9Y5I0 950 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 GOLGA6L7A0A1B0GV03 622 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 hCG_1984214I3L0E3 225 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 ZNF263O14978 683 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 LUC7L3O95232 432 aaKnown RBP6.89□□□□□ -1.31
SGIP1-201ENST00000237247 CNGA1P29973 690 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 HOXA10P31260 410 aaPredicted RBP6.89□□□□□ -1.31
SGIP1-201ENST00000237247 IGHMBP2P38935 993 aaKnown RBP6.89□□□□□ -1.31
SGIP1-201ENST00000237247 CCNG1P51959 295 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 AMPD3Q01432 767 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 MAN2A1Q16706 1144 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 PIK3AP1Q6ZUJ8 805 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 STAG2Q8N3U4 1231 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 ZNF713Q8N859 430 aaPredicted RBP6.89□□□□□ -1.31
SGIP1-201ENST00000237247 RASSF8Q8NHQ8 419 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.89□□□□□ -1.31
SGIP1-201ENST00000237247 MYH7BA7E2Y1 1941 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 ESYT2A0FGR8 921 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 HSF2BPO75031 334 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 PDHBP11177 359 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 MARSP56192 900 aaKnown RBP6.89□□□□□ -1.31
SGIP1-201ENST00000237247 PAK2Q13177 524 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 SEPT2Q15019 361 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 ADGRA1Q86SQ6 560 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 CEP57Q86XR8 500 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 ZC3H3Q8IXZ2 948 aaKnown RBP6.89□□□□□ -1.31
SGIP1-201ENST00000237247 IFT20Q8IY31 132 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 IQCKQ8N0W5 287 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 CSGALNACT2Q8N6G5 542 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 TEX9Q8N6V9 391 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 TRIM9Q9C026 710 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 BRD8Q9H0E9 1235 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 TMEM165Q9HC07 324 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 PRDM11Q9NQV5 511 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 MAPK8IP1Q9UQF2 711 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 HMGB1P1B2RPK0 211 aaPredicted RBP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 PRDM1O75626 825 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 VIL1P09327 827 aaKnown RBP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 GNAT1P11488 350 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 TRIM21P19474 475 aaKnown RBP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 C2orf54Q08AI8 447 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 BTG3Q14201 252 aaPredicted RBP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 VWA3BQ502W6 1294 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 CMPK2Q5EBM0 449 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 SYNE4Q8N205 404 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 ERMNQ8TAM6 284 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 BAP1Q92560 729 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 P3H4Q92791 437 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 LRRC27Q9C0I9 530 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 WDR35Q9P2L0 1181 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 LRP2BPQ9P2M1 347 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 COL2A1P02458 1487 aaPredicted RBP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 TRIM49BA6NDI0 452 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 HSPA9P38646 679 aaKnown RBP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 NOVP48745 357 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 KIF11P52732 1056 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 RHBDL3P58872 404 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 EHHADHQ08426 723 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 Q4G0T1 1027 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 TTMPQ5BVD1 217 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 PPP4R3AQ6IN85 833 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 PDXDC1Q6P996 788 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 KRT25Q7Z3Z0 450 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 CMTR1Q8N1G2 835 aaKnown RBP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 GUF1Q8N442 669 aaKnown RBP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 CCDC42Q96M95 316 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 LUC7LQ9NQ29 371 aaKnown RBP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 AGPAT5Q9NUQ2 364 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 ARHGAP20Q9P2F6 1191 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 TMEM59LQ9UK28 342 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 PCDHA6Q9UN73 950 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 PCDHA8Q9Y5H6 950 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 UTRNP46939 3433 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 FAM205AQ6ZU69 1335 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 ENC1O14682 589 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 CREB3O43889 395 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 VIMP08670 466 aaKnown RBP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 PAEPP09466 180 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 MCM7P33993 719 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 GNGT1P63211 74 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 KIAA0753Q2KHM9 967 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 SGSM1Q2NKQ1 1148 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 LACTB2Q53H82 288 aaPredicted RBP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 C10orf76Q5T2E6 689 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 SND1Q7KZF4 910 aaKnown RBP eCLIP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 NSMCE1Q8WV22 266 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 SPZ1Q9BXG8 430 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 IFIH1Q9BYX4 1025 aaKnown RBP6.88□□□□□ -1.31
SGIP1-201ENST00000237247 EPN3Q9H201 632 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 RIC8AQ9NPQ8 531 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 BARHL2Q9NY43 387 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 TMCO1Q9UM00 188 aa6.88□□□□□ -1.31
SGIP1-201ENST00000237247 MYH4Q9Y623 1939 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms