RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 KLC1Q07866 573 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 CBLBQ13191 982 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 TRIM71Q2Q1W2 868 aaKnown RBP6.21□□□□□ -1.42
RFX4-201ENST00000229387 USP17L2Q6R6M4 530 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 NEK10Q6ZWH5 1172 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 USP17L1Q7RTZ2 530 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 DQX1Q8TE96 717 aaKnown RBP6.21□□□□□ -1.42
RFX4-201ENST00000229387 CYFIP2Q96F07 1278 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 MPP4Q96JB8 637 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 XPO4Q9C0E2 1151 aaKnown RBP6.21□□□□□ -1.42
RFX4-201ENST00000229387 PUS7LQ9H0K6 701 aaKnown RBP6.21□□□□□ -1.42
RFX4-201ENST00000229387 SEC31BQ9NQW1 1179 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 RHBDL2Q9NX52 303 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 BTBD19C9JJ37 291 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 UBE2Q2LH0YL09 131 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 KCNQ2O43526 872 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 POLR3DP05423 398 aaPredicted RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 HNRNPCP07910 306 aaKnown RBP eCLIP6.2□□□□□ -1.42
RFX4-201ENST00000229387 ATP2A2P16615 1042 aaKnown RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 ITGA6P23229 1130 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 VAMP1P23763 118 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 GSTT1P30711 240 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 S100A5P33763 92 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 SERPINB8P50452 374 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 TUBA4AP68366 448 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 APBA1Q02410 837 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 ITIH3Q06033 890 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 IFIT5Q13325 482 aaKnown RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 PDCLQ13371 301 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 TAF11Q15544 211 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 ZNF362Q5T0B9 420 aaPredicted RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 CCSAPQ6IQ19 270 aaPredicted RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 HIBCHQ6NVY1 386 aaPredicted RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 KIF6Q6ZMV9 814 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 CLMNQ96JQ2 1002 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 CATSPER2Q96P56 530 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 GSDMAQ96QA5 445 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 CCT7Q99832 543 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 MYL10Q9BUA6 226 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 TIPINQ9BVW5 301 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 KIAA1468Q9P260 1216 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 SEPT3Q9UH03 358 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 SLC12A4Q9UP95 1085 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 FAM208AQ9UK61 1670 aaKnown RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 UTYO14607 1347 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 CHD2O14647 1828 aaKnown RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 TUBGCP6Q96RT7 1819 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 RHOXF2BP0C7M4 288 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 ACADSP16219 412 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 PSMA5P28066 241 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 TUBP50607 506 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 MRPL58Q14197 206 aaKnown RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 CCDC14Q49A88 953 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 PTF1AQ7RTS3 328 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 SLC51AQ86UW1 340 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 PDILTQ8N807 584 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 KBTBD3Q8NAB2 608 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 RHOXF2Q9BQY4 288 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 C2orf49Q9BVC5 232 aaPredicted RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 FADS3Q9Y5Q0 445 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 BCL9O00512 1426 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 RGPD5Q99666 1765 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 SMIM22K7EJ46 135 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 P4HBP07237 508 aaKnown RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 HSPD1P10809 573 aaKnown RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 CYP4A11Q02928 519 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 TCIRG1Q13488 830 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 ADRM1Q16186 407 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 CFAP100Q494V2 611 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 GLE1Q53GS7 698 aaKnown RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 DAB2IPQ5VWQ8 1189 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 IRGCQ6NXR0 463 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 TRIM50Q86XT4 487 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 WDR75Q8IWA0 830 aaKnown RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 PXYLP1Q8TE99 480 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 ZSCAN31Q96LW9 406 aaPredicted RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 HAUS7Q99871 368 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 FAM167BQ9BTA0 163 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 RTFDC1Q9BY42 306 aaPredicted RBP6.2□□□□□ -1.42
RFX4-201ENST00000229387 CARD9Q9H257 536 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 IKBKGQ9Y6K9 419 aa6.2□□□□□ -1.42
RFX4-201ENST00000229387 MAST3O60307 1309 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 CAMTA1Q9Y6Y1 1673 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 IRS4O14654 1257 aaPredicted RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 SCAMP3O14828 347 aaKnown RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 POTEIP0CG38 1075 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 CPA3P15088 417 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 MDH1P40925 334 aaKnown RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 PPP4CP60510 307 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 RABL6Q3YEC7 729 aaPredicted RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 CCDC122Q5T0U0 273 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 KLC3Q6P597 504 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 TMEM154Q6P9G4 183 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 CCNI2Q6ZMN8 369 aaPredicted RBP6.19□□□□□ -1.42
RFX4-201ENST00000229387 DAAM2Q86T65 1068 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 GLYCTKQ8IVS8 523 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 SCAIQ8N9R8 606 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 CCDC63Q8NA47 563 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 ACMSDQ8TDX5 336 aa6.19□□□□□ -1.42
RFX4-201ENST00000229387 AENQ8WTP8 325 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms