RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 RAD54LQ92698 747 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 PURBQ96QR8 312 aaKnown RBP11.89□□□□□ -0.51
CDCA3-201ENST00000229265 POLR3CQ9BUI4 534 aaPredicted RBP11.89□□□□□ -0.51
CDCA3-201ENST00000229265 SPATC1LQ9H0A9 340 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
CDCA3-201ENST00000229265 ADD3Q9UEY8 706 aaKnown RBP11.89□□□□□ -0.51
CDCA3-201ENST00000229265 LRRC37A2A6NM11 1700 aa11.89□□□□□ -0.51
CDCA3-201ENST00000229265 A0A1W2PQC6 194 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 GOLGA6L9A6NEM1 432 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 FLOT1O75955 427 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 FARP2O94887 1054 aaPredicted RBP11.88□□□□□ -0.51
CDCA3-201ENST00000229265 TDP2O95551 362 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 ICAM1P05362 532 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 TPM1P09493 284 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 ATP1A3P13637 1013 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 CD44P16070 742 aaKnown RBP11.88□□□□□ -0.51
CDCA3-201ENST00000229265 RPA1P27694 616 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 ADORA2AP29274 412 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 PRCPP42785 496 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 OAZ1P54368 228 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 PABPC4Q13310 644 aaKnown RBP eCLIP11.88□□□□□ -0.512e-7■■■□□ 15.6
CDCA3-201ENST00000229265 COG2Q14746 738 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 CCDC144BQ3MJ40 725 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 TMEM63BQ5T3F8 832 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 CENPPQ6IPU0 288 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 XRRA1Q6P2D8 792 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 USP17L6PQ6QN14 398 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 FILIP1Q7Z7B0 1213 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 GUF1Q8N442 669 aaKnown RBP11.88□□□□□ -0.51
CDCA3-201ENST00000229265 ZNF830Q96NB3 372 aaPredicted RBP11.88□□□□□ -0.51
CDCA3-201ENST00000229265 NAP1L5Q96NT1 182 aaPredicted RBP11.88□□□□□ -0.51
CDCA3-201ENST00000229265 PANX2Q96RD6 677 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 MED15Q96RN5 788 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 EXOC1Q9NV70 894 aa11.88□□□□□ -0.51
CDCA3-201ENST00000229265 ZNF536O15090 1300 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 SYNRGQ9UMZ2 1314 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 VWA5AO00534 786 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 MAFGO15525 162 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 SLC37A4O43826 429 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 RAD21O60216 631 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 CDC25AP30304 524 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 PBX1P40424 430 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 SETQ01105 290 aaPredicted RBP11.87□□□□□ -0.51
CDCA3-201ENST00000229265 LRRC63Q05C16 580 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 PDE4DQ08499 809 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 UBE2SQ16763 222 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 TCP11X2Q5H9J9 407 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 WDR78Q5VTH9 848 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 APTXQ7Z2E3 356 aaKnown RBP11.87□□□□□ -0.51
CDCA3-201ENST00000229265 TMC6Q7Z403 805 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 RETREG2Q8NC44 543 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 ETNPPLQ8TBG4 499 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 SNX29Q8TEQ0 813 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 NELFBQ8WX92 580 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 PNMA5Q96PV4 448 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 NUDT12Q9BQG2 462 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 NUP58Q9BVL2 599 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 BLZF1Q9H2G9 400 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 SAMSN1Q9NSI8 373 aaKnown RBP11.87□□□□□ -0.51
CDCA3-201ENST00000229265 BLOC1S4Q9NUP1 217 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 OGDHLQ9ULD0 1010 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 PPP1R9AQ9ULJ8 1098 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 DNM3Q9UQ16 869 aa11.87□□□□□ -0.51
CDCA3-201ENST00000229265 A0A087WWV3 80 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 SOX1O00570 391 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-201ENST00000229265 ARHGAP6O43182 974 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 ZSCAN12O43309 604 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 ZBED4O75132 1171 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 TFRCP02786 760 aaKnown RBP11.86□□□□□ -0.51
CDCA3-201ENST00000229265 COL6A1P12109 1028 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 XRCC5P13010 732 aaKnown RBP11.86□□□□□ -0.51
CDCA3-201ENST00000229265 CYBAP13498 195 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 MAPK4P31152 587 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 ZNF76P36508 570 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 DNM2P50570 870 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 HSD17B4P51659 736 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 CCZ1BP86790 482 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 CCZ1P86791 482 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-201ENST00000229265 EHHADHQ08426 723 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 PLS1Q14651 629 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 ARHGEF6Q15052 776 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 LRRC26Q2I0M4 334 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 HABP4Q5JVS0 413 aaKnown RBP11.86□□□□□ -0.51
CDCA3-201ENST00000229265 DNTTIP2Q5QJE6 756 aaKnown RBP11.86□□□□□ -0.51
CDCA3-201ENST00000229265 PPFIBP1Q86W92 1011 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 CNGA4Q8IV77 575 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 CCDC65Q8IXS2 484 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 NEK9Q8TD19 979 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 RIT2Q99578 217 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 APBA2Q99767 749 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 WDR11Q9BZH6 1224 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 TUFT1Q9NNX1 390 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 KCND2Q9NZV8 630 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 MAGEC2Q9UBF1 373 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-201ENST00000229265 COL6A3P12111 3177 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 RPTORQ8N122 1335 aa11.86□□□□□ -0.51
CDCA3-201ENST00000229265 EYSQ5T1H1 3165 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.85□□□□□ -0.51
CDCA3-201ENST00000229265 SLC15A5A6NIM6 579 aa11.85□□□□□ -0.51
CDCA3-201ENST00000229265 PP2D1A8MPX8 630 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms