RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 NAB2Q15742 525 aa24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 ASIC2Q16515 512 aa24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 SLC18A3Q16572 532 aa24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 REEP2Q9BRK0 252 aa24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 ZHX3Q9H4I2 956 aa24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 ARMCX3Q9UH62 379 aaPredicted RBP24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 HDAC9Q9UKV0 1011 aa24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 BZW2Q9Y6E2 419 aaKnown RBP24.18■■□□□ 1.46
SMARCD2-201ENST00000225742 SLX4Q8IY92 1834 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 GH2P01242 217 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 ZNF76P36508 570 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 PABPC4Q13310 644 aaKnown RBP eCLIP24.17■■□□□ 1.465e-7■■■□□ 18.3
SMARCD2-201ENST00000225742 USH1GQ495M9 461 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 SFR1Q86XK3 245 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 COG1Q8WTW3 980 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 TYW1Q9NV66 732 aaKnown RBP24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 ERICH4A6NGS2 130 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 BTNL10A8MVZ5 291 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 AFPP02771 609 aaKnown RBP24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 PSMC6P62333 389 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 C2orf54Q08AI8 447 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 GLE1Q53GS7 698 aaKnown RBP24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 CCDC181Q5TID7 509 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 SPATA4Q8NEY3 305 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 ARHGEF10LQ9HCE6 1279 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 TUFT1Q9NNX1 390 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 VPS18Q9P253 973 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 PRR12Q9ULL5 1215 aa24.17■■□□□ 1.46
SMARCD2-201ENST00000225742 ATP8B3O60423 1300 aa24.16■■□□□ 1.46
SMARCD2-201ENST00000225742 MUTP22033 750 aa24.16■■□□□ 1.46
SMARCD2-201ENST00000225742 RAPGEF1Q13905 1077 aa24.16■■□□□ 1.46
SMARCD2-201ENST00000225742 KLHDC7AQ5VTJ3 777 aa24.16■■□□□ 1.46
SMARCD2-201ENST00000225742 CCDC102AQ96A19 550 aa24.16■■□□□ 1.46
SMARCD2-201ENST00000225742 TLR10Q9BXR5 811 aa24.16■■□□□ 1.46
SMARCD2-201ENST00000225742 TDRD3Q9H7E2 651 aaKnown RBP24.16■■□□□ 1.46
SMARCD2-201ENST00000225742 FBXL5Q9UKA1 691 aa24.16■■□□□ 1.46
SMARCD2-201ENST00000225742 HPCAL4Q9UM19 191 aa24.16■■□□□ 1.46
SMARCD2-201ENST00000225742 MYH10P35580 1976 aa24.16■■□□□ 1.46
SMARCD2-201ENST00000225742 OPLAHO14841 1288 aa24.15■■□□□ 1.46
SMARCD2-201ENST00000225742 TBCAO75347 108 aaKnown RBP24.15■■□□□ 1.46
SMARCD2-201ENST00000225742 TNNT3P45378 269 aaPredicted RBP24.15■■□□□ 1.46
SMARCD2-201ENST00000225742 RAD51AP2Q09MP3 1159 aa24.15■■□□□ 1.46
SMARCD2-201ENST00000225742 KLHL30Q0D2K2 578 aa24.15■■□□□ 1.46
SMARCD2-201ENST00000225742 EIF2AK1Q9BQI3 630 aaKnown RBP24.15■■□□□ 1.46
SMARCD2-201ENST00000225742 EHMT1Q9H9B1 1298 aa24.15■■□□□ 1.46
SMARCD2-201ENST00000225742 OLFML3Q9NRN5 406 aa24.15■■□□□ 1.46
SMARCD2-201ENST00000225742 ERCC3P19447 782 aa24.14■■□□□ 1.46
SMARCD2-201ENST00000225742 SNAP25P60880 206 aa24.14■■□□□ 1.46
SMARCD2-201ENST00000225742 NFIL3Q16649 462 aa24.14■■□□□ 1.46
SMARCD2-201ENST00000225742 NFRKBQ6P4R8 1299 aa24.14■■□□□ 1.46
SMARCD2-201ENST00000225742 UIMC1Q96RL1 719 aa24.14■■□□□ 1.46
SMARCD2-201ENST00000225742 CRACR2AQ9BSW2 395 aa24.14■■□□□ 1.46
SMARCD2-201ENST00000225742 RNF216Q9NWF9 866 aaPredicted RBP24.14■■□□□ 1.46
SMARCD2-201ENST00000225742 SALL4Q9UJQ4 1053 aa24.14■■□□□ 1.46
SMARCD2-201ENST00000225742 RABGAP1Q9Y3P9 1069 aa24.14■■□□□ 1.46
SMARCD2-201ENST00000225742 MEIS1O00470 390 aa24.14■■□□□ 1.45
SMARCD2-201ENST00000225742 EIF3DO15371 548 aaKnown RBP eCLIP24.14■■□□□ 1.45
SMARCD2-201ENST00000225742 TNFRSF8P28908 595 aa24.14■■□□□ 1.45
SMARCD2-201ENST00000225742 CASP5P51878 434 aa24.14■■□□□ 1.45
SMARCD2-201ENST00000225742 SLC15A2Q16348 729 aa24.14■■□□□ 1.45
SMARCD2-201ENST00000225742 CFAP221Q4G0U5 840 aa24.14■■□□□ 1.45
SMARCD2-201ENST00000225742 AENQ8WTP8 325 aaKnown RBP24.14■■□□□ 1.45
SMARCD2-201ENST00000225742 TBC1D5Q92609 795 aa24.14■■□□□ 1.45
SMARCD2-201ENST00000225742 DRC1Q96MC2 740 aa24.14■■□□□ 1.45
SMARCD2-201ENST00000225742 TMOD2Q9NZR1 351 aa24.14■■□□□ 1.45
SMARCD2-201ENST00000225742 FAN1Q9Y2M0 1017 aa24.14■■□□□ 1.45
SMARCD2-201ENST00000225742 A0A0U1RQG5 324 aaPredicted RBP24.13■■□□□ 1.45
SMARCD2-201ENST00000225742 GRID2IPA4D2P6 1211 aa24.13■■□□□ 1.45
SMARCD2-201ENST00000225742 APBA3O96018 575 aa24.13■■□□□ 1.45
SMARCD2-201ENST00000225742 XRCC5P13010 732 aaKnown RBP24.13■■□□□ 1.45
SMARCD2-201ENST00000225742 HOXD13P35453 343 aa24.13■■□□□ 1.45
SMARCD2-201ENST00000225742 STAT2P52630 851 aa24.13■■□□□ 1.45
SMARCD2-201ENST00000225742 MUM1L1Q5H9M0 696 aa24.13■■□□□ 1.45
SMARCD2-201ENST00000225742 DPY19L2P1Q6NXN4 242 aa24.13■■□□□ 1.45
SMARCD2-201ENST00000225742 C7orf43Q8WVR3 580 aa24.13■■□□□ 1.45
SMARCD2-201ENST00000225742 CSRNP1Q96S65 589 aa24.13■■□□□ 1.45
SMARCD2-201ENST00000225742 GOPCQ9HD26 462 aa24.13■■□□□ 1.45
SMARCD2-201ENST00000225742 PCDHGC5Q9Y5F6 944 aa24.13■■□□□ 1.45
SMARCD2-201ENST00000225742 IGLV3-22A0A075B6J6 115 aa24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 GTPBP10A4D1E9 387 aaKnown RBP24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 NR3C1P04150 777 aa24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 EPB41P11171 864 aaKnown RBP24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 NAP1L1P55209 391 aaKnown RBP24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 PSME4Q14997 1843 aa24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 UBE4BO95155 1302 aa24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 A0A1W2PRG0 241 aa24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 PLA2G6O60733 806 aa24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 N4BP1O75113 896 aaKnown RBP24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 JAG1P78504 1218 aa24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 PPP2R5CQ13362 524 aa24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 HSD17B14Q9BPX1 270 aa24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 SELENOOQ9BVL4 669 aa24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 BHMT2Q9H2M3 363 aa24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 TMX2Q9Y320 296 aa24.12■■□□□ 1.45
SMARCD2-201ENST00000225742 MYBP10242 640 aa24.11■■□□□ 1.45
SMARCD2-201ENST00000225742 HOXA13P31271 388 aaPredicted RBP24.11■■□□□ 1.45
SMARCD2-201ENST00000225742 PRKCIP41743 596 aa24.11■■□□□ 1.45
SMARCD2-201ENST00000225742 IFI16Q16666 785 aaKnown RBP24.11■■□□□ 1.45
SMARCD2-201ENST00000225742 AOC3Q16853 763 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms