RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 ADD1P35611 737 aaKnown RBP20.51■□□□□ 0.87
PFN1-201ENST00000225655 FAM26DQ5JW98 314 aa20.51■□□□□ 0.87
PFN1-201ENST00000225655 SEPT8Q92599 483 aa20.51■□□□□ 0.87
PFN1-201ENST00000225655 MXRA8Q9BRK3 442 aa20.51■□□□□ 0.87
PFN1-201ENST00000225655 NCOA5Q9HCD5 579 aaKnown RBP20.51■□□□□ 0.87
PFN1-201ENST00000225655 JPH1Q9HDC5 661 aaPredicted RBP20.51■□□□□ 0.87
PFN1-201ENST00000225655 KCNH7Q9NS40 1196 aa20.51■□□□□ 0.87
PFN1-201ENST00000225655 PKD2L1Q9P0L9 805 aa20.51■□□□□ 0.87
PFN1-201ENST00000225655 SMCO2A6NFE2 343 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 AMHP03971 560 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 IFNAR1P17181 557 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 MRPS5P82675 430 aaKnown RBP20.5■□□□□ 0.87
PFN1-201ENST00000225655 SSRP1Q08945 709 aaKnown RBP20.5■□□□□ 0.87
PFN1-201ENST00000225655 SCRN1Q12765 414 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 AP3B2Q13367 1082 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 ME3Q16798 604 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 TAF2Q6P1X5 1199 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.5■□□□□ 0.871e-9■■□□□ 13.4
PFN1-201ENST00000225655 RPAINQ86UA6 219 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 MICALL1Q8N3F8 863 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 GLG1Q92896 1179 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 GTF3C6Q969F1 213 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 ASB2Q96Q27 587 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 ANO3Q9BYT9 981 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 SMARCAD1Q9H4L7 1026 aa20.5■□□□□ 0.87
PFN1-201ENST00000225655 RBAK-RBAKDNI3L0D1 243 aa20.49■□□□□ 0.87
PFN1-201ENST00000225655 CLK2P49760 499 aaKnown RBP20.49■□□□□ 0.87
PFN1-201ENST00000225655 PPFIA1Q13136 1202 aa20.49■□□□□ 0.87
PFN1-201ENST00000225655 GRB10Q13322 594 aa20.49■□□□□ 0.87
PFN1-201ENST00000225655 PFKFB3Q16875 520 aaPredicted RBP20.49■□□□□ 0.87
PFN1-201ENST00000225655 CEP55Q53EZ4 464 aa20.49■□□□□ 0.87
PFN1-201ENST00000225655 SPRED2Q7Z698 418 aa20.49■□□□□ 0.87
PFN1-201ENST00000225655 CYP2W1Q8TAV3 490 aa20.49■□□□□ 0.87
PFN1-201ENST00000225655 PGBD1Q96JS3 809 aa20.49■□□□□ 0.87
PFN1-201ENST00000225655 RNF26Q9BY78 433 aaPredicted RBP20.49■□□□□ 0.87
PFN1-201ENST00000225655 SLC9A2Q9UBY0 812 aa20.49■□□□□ 0.87
PFN1-201ENST00000225655 INSL6Q9Y581 213 aa20.49■□□□□ 0.87
PFN1-201ENST00000225655 NFASCO94856 1347 aa20.49■□□□□ 0.87
PFN1-201ENST00000225655 SIP14410 1827 aa20.48■□□□□ 0.87
PFN1-201ENST00000225655 MBLAC1A4D2B0 266 aaPredicted RBP20.48■□□□□ 0.87
PFN1-201ENST00000225655 LINC01553A4QN01 128 aa20.48■□□□□ 0.87
PFN1-201ENST00000225655 LPXNO60711 386 aa20.48■□□□□ 0.87
PFN1-201ENST00000225655 MARK3P27448 753 aa20.48■□□□□ 0.87
PFN1-201ENST00000225655 SREBF1P36956 1147 aa20.48■□□□□ 0.87
PFN1-201ENST00000225655 ERVK-21P61565 698 aa20.48■□□□□ 0.87
PFN1-201ENST00000225655 GRIK4Q16099 956 aa20.48■□□□□ 0.87
PFN1-201ENST00000225655 FAM117BQ6P1L5 589 aa20.48■□□□□ 0.87
PFN1-201ENST00000225655 WASF1Q92558 559 aa20.48■□□□□ 0.87
PFN1-201ENST00000225655 SDF4Q9BRK5 362 aa20.48■□□□□ 0.87
PFN1-201ENST00000225655 SLC26A6Q9BXS9 759 aa20.48■□□□□ 0.87
PFN1-201ENST00000225655 OSBPL7Q9BZF2 842 aa20.48■□□□□ 0.87
PFN1-201ENST00000225655 MEIS1O00470 390 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 PRPF3O43395 683 aaKnown RBP20.47■□□□□ 0.87
PFN1-201ENST00000225655 ARP10275 920 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 SCG2P13521 617 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 HTRA4P83105 476 aaPredicted RBP20.47■□□□□ 0.87
PFN1-201ENST00000225655 MARCH8Q5T0T0 291 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 KRT40Q6A162 431 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 RUFY4Q6ZNE9 571 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 RSPH3Q86UC2 560 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 HSCBQ8IWL3 235 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 MYOCDQ8IZQ8 938 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 NECAB1Q8N987 351 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 CCDC12Q8WUD4 166 aaPredicted RBP20.47■□□□□ 0.87
PFN1-201ENST00000225655 APBB2Q92870 758 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 TGS1Q96RS0 853 aaKnown RBP20.47■□□□□ 0.87
PFN1-201ENST00000225655 LLPHQ9BRT6 129 aaKnown RBP20.47■□□□□ 0.87
PFN1-201ENST00000225655 AGO4Q9HCK5 861 aaKnown RBP20.47■□□□□ 0.87
PFN1-201ENST00000225655 TMEM260Q9NX78 707 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 TUBE1Q9UJT0 475 aa20.47■□□□□ 0.87
PFN1-201ENST00000225655 ESYT2A0FGR8 921 aa20.46■□□□□ 0.87
PFN1-201ENST00000225655 CHRNA1P02708 482 aa20.46■□□□□ 0.87
PFN1-201ENST00000225655 ACTR2P61160 394 aa20.46■□□□□ 0.87
PFN1-201ENST00000225655 NIPA1Q7RTP0 329 aa20.46■□□□□ 0.87
PFN1-201ENST00000225655 SP7Q8TDD2 431 aaPredicted RBP20.46■□□□□ 0.87
PFN1-201ENST00000225655 PHKBQ93100 1093 aa20.46■□□□□ 0.87
PFN1-201ENST00000225655 PCYT2Q99447 389 aa20.46■□□□□ 0.87
PFN1-201ENST00000225655 IFIH1Q9BYX4 1025 aaKnown RBP20.46■□□□□ 0.87
PFN1-201ENST00000225655 AZI2Q9H6S1 392 aa20.46■□□□□ 0.87
PFN1-201ENST00000225655 LMCD1Q9NZU5 365 aa20.46■□□□□ 0.87
PFN1-201ENST00000225655 SPTBN5Q9NRC6 3674 aaKnown RBP20.45■□□□□ 0.86
PFN1-201ENST00000225655 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.45■□□□□ 0.86
PFN1-201ENST00000225655 RRN3P2A6NIE6 340 aa20.45■□□□□ 0.86
PFN1-201ENST00000225655 DEXIO95424 95 aa20.45■□□□□ 0.86
PFN1-201ENST00000225655 LARGE1O95461 756 aa20.45■□□□□ 0.86
PFN1-201ENST00000225655 XBP1P17861 261 aa20.45■□□□□ 0.86
PFN1-201ENST00000225655 ITGB3BPQ13352 177 aaPredicted RBP20.45■□□□□ 0.86
PFN1-201ENST00000225655 NTRK3Q16288 839 aa20.45■□□□□ 0.86
PFN1-201ENST00000225655 PLPPR4Q7Z2D5 763 aa20.45■□□□□ 0.86
PFN1-201ENST00000225655 CCDC83Q8IWF9 413 aa20.45■□□□□ 0.86
PFN1-201ENST00000225655 TNPO1Q92973 898 aaKnown RBP20.45■□□□□ 0.86
PFN1-201ENST00000225655 TOP1MTQ969P6 601 aa20.45■□□□□ 0.86
PFN1-201ENST00000225655 ZMYND12Q9H0C1 365 aa20.45■□□□□ 0.86
PFN1-201ENST00000225655 SUGCTQ9HAC7 445 aa20.45■□□□□ 0.86
PFN1-201ENST00000225655 STK36Q9NRP7 1315 aa20.45■□□□□ 0.86
PFN1-201ENST00000225655 COL4A6Q14031 1691 aa20.45■□□□□ 0.86
PFN1-201ENST00000225655 RPLP2P05387 115 aaKnown RBP20.44■□□□□ 0.86
PFN1-201ENST00000225655 INSRRP14616 1297 aa20.44■□□□□ 0.86
PFN1-201ENST00000225655 ZNF76P36508 570 aa20.44■□□□□ 0.86
PFN1-201ENST00000225655 MGAT3Q09327 533 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms