RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 STAT3P40763 770 aa23.14■■□□□ 1.3
CCDC130-201ENST00000221554 POLR2FP61218 127 aaKnown RBP23.14■■□□□ 1.3
CCDC130-201ENST00000221554 SLC16A10Q8TF71 515 aa23.14■■□□□ 1.3
CCDC130-201ENST00000221554 ZHX3Q9H4I2 956 aa23.14■■□□□ 1.3
CCDC130-201ENST00000221554 TUFT1Q9NNX1 390 aa23.14■■□□□ 1.3
CCDC130-201ENST00000221554 ARMCX3Q9UH62 379 aaPredicted RBP23.14■■□□□ 1.3
CCDC130-201ENST00000221554 SLC16A3O15427 465 aaKnown RBP23.14■■□□□ 1.29
CCDC130-201ENST00000221554 AARSP49588 968 aaKnown RBP eCLIP23.14■■□□□ 1.29
CCDC130-201ENST00000221554 KCNH2Q12809 1159 aa23.14■■□□□ 1.29
CCDC130-201ENST00000221554 SLC18A3Q16572 532 aa23.14■■□□□ 1.29
CCDC130-201ENST00000221554 CCDC181Q5TID7 509 aa23.14■■□□□ 1.29
CCDC130-201ENST00000221554 OSBPL9Q96SU4 736 aa23.14■■□□□ 1.29
CCDC130-201ENST00000221554 TYW1Q9NV66 732 aaKnown RBP23.14■■□□□ 1.29
CCDC130-201ENST00000221554 ADAM21Q9UKJ8 722 aa23.14■■□□□ 1.29
CCDC130-201ENST00000221554 CAPN6Q9Y6Q1 641 aa23.14■■□□□ 1.29
CCDC130-201ENST00000221554 NPHP3-ACAD11A0A0J9YXS1 232 aa23.13■■□□□ 1.29
CCDC130-201ENST00000221554 BTNL10A8MVZ5 291 aa23.13■■□□□ 1.29
CCDC130-201ENST00000221554 MSH4O15457 936 aa23.13■■□□□ 1.29
CCDC130-201ENST00000221554 GDF11O95390 407 aa23.13■■□□□ 1.29
CCDC130-201ENST00000221554 GH2P01242 217 aa23.13■■□□□ 1.29
CCDC130-201ENST00000221554 ASIC2Q16515 512 aa23.13■■□□□ 1.29
CCDC130-201ENST00000221554 USH1GQ495M9 461 aa23.13■■□□□ 1.29
CCDC130-201ENST00000221554 GLE1Q53GS7 698 aaKnown RBP23.13■■□□□ 1.29
CCDC130-201ENST00000221554 CCNI2Q6ZMN8 369 aaPredicted RBP23.13■■□□□ 1.29
CCDC130-201ENST00000221554 MLXIPQ9HAP2 919 aa23.13■■□□□ 1.29
CCDC130-201ENST00000221554 GOPCQ9HD26 462 aa23.13■■□□□ 1.29
CCDC130-201ENST00000221554 ZCCHC17Q9NP64 241 aaKnown RBP23.13■■□□□ 1.29
CCDC130-201ENST00000221554 NLRC4Q9NPP4 1024 aa23.13■■□□□ 1.29
CCDC130-201ENST00000221554 FAM86B1E9PN63 330 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 H3BQF6 201 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 TBCAO75347 108 aaKnown RBP23.12■■□□□ 1.29
CCDC130-201ENST00000221554 AFPP02771 609 aaKnown RBP23.12■■□□□ 1.29
CCDC130-201ENST00000221554 FAM86B2P0C5J1 330 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 STAT2P52630 851 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 GFPT1Q06210 699 aaPredicted RBP23.12■■□□□ 1.29
CCDC130-201ENST00000221554 REEP2Q9BRK0 252 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 MTFR1LQ9H019 292 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 TDRD3Q9H7E2 651 aaKnown RBP23.12■■□□□ 1.29
CCDC130-201ENST00000221554 OLFML3Q9NRN5 406 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 FBXL5Q9UKA1 691 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 HDAC9Q9UKV0 1011 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 VAV3Q9UKW4 847 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 PRR12Q9ULL5 1215 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 ATP8B3O60423 1300 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 ZNF646O15015 1829 aaPredicted RBP23.12■■□□□ 1.29
CCDC130-201ENST00000221554 RASSF7Q02833 373 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 KLHL30Q0D2K2 578 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 PABPC4Q13310 644 aaKnown RBP eCLIP23.12■■□□□ 1.29
CCDC130-201ENST00000221554 NAB2Q15742 525 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 NFIL3Q16649 462 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 CHURC1Q8WUH1 139 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 CSRNP1Q96S65 589 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 FGFBP2Q9BYJ0 223 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 RABGAP1Q9Y3P9 1069 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 PCDHAC2Q9Y5I4 1007 aa23.12■■□□□ 1.29
CCDC130-201ENST00000221554 PDE2AO00408 941 aaPredicted RBP23.11■■□□□ 1.29
CCDC130-201ENST00000221554 ZNF185O15231 689 aa23.11■■□□□ 1.29
CCDC130-201ENST00000221554 EIF3DO15371 548 aaKnown RBP eCLIP23.11■■□□□ 1.29
CCDC130-201ENST00000221554 PLA2G6O60733 806 aa23.11■■□□□ 1.29
CCDC130-201ENST00000221554 SLURP2P0DP57 97 aa23.11■■□□□ 1.29
CCDC130-201ENST00000221554 SFR1Q86XK3 245 aa23.11■■□□□ 1.29
CCDC130-201ENST00000221554 SPATA4Q8NEY3 305 aa23.11■■□□□ 1.29
CCDC130-201ENST00000221554 COG1Q8WTW3 980 aa23.11■■□□□ 1.29
CCDC130-201ENST00000221554 EIF2AK1Q9BQI3 630 aaKnown RBP23.11■■□□□ 1.29
CCDC130-201ENST00000221554 GANQ9H2C0 597 aa23.11■■□□□ 1.29
CCDC130-201ENST00000221554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.11■■□□□ 1.29
CCDC130-201ENST00000221554 EPB41P11171 864 aaKnown RBP23.1■■□□□ 1.29
CCDC130-201ENST00000221554 XRCC5P13010 732 aaKnown RBP23.1■■□□□ 1.29
CCDC130-201ENST00000221554 IFI16Q16666 785 aaKnown RBP23.1■■□□□ 1.29
CCDC130-201ENST00000221554 CFAP221Q4G0U5 840 aa23.1■■□□□ 1.29
CCDC130-201ENST00000221554 STXBP4Q6ZWJ1 553 aa23.1■■□□□ 1.29
CCDC130-201ENST00000221554 P2RX7Q99572 595 aaKnown RBP23.1■■□□□ 1.29
CCDC130-201ENST00000221554 KCND2Q9NZV8 630 aa23.1■■□□□ 1.29
CCDC130-201ENST00000221554 SEL1LQ9UBV2 794 aa23.1■■□□□ 1.29
CCDC130-201ENST00000221554 TMX2Q9Y320 296 aa23.1■■□□□ 1.29
CCDC130-201ENST00000221554 A0A0U1RQG5 324 aaPredicted RBP23.09■■□□□ 1.29
CCDC130-201ENST00000221554 GTPBP10A4D1E9 387 aaKnown RBP23.09■■□□□ 1.29
CCDC130-201ENST00000221554 TLR2O60603 784 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 NAP1L1P55209 391 aaKnown RBP23.09■■□□□ 1.29
CCDC130-201ENST00000221554 CACNB1Q02641 598 aaPredicted RBP23.09■■□□□ 1.29
CCDC130-201ENST00000221554 C7orf43Q8WVR3 580 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 CCDC102AQ96A19 550 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 SGIP1Q9BQI5 828 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 GRID2IPA4D2P6 1211 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 GCOM1H8Y6P7 765 aaPredicted RBP23.09■■□□□ 1.29
CCDC130-201ENST00000221554 POLR2MP0CAP2 368 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 PTGER2P43116 358 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 PSMC6P62333 389 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 PPP2R5CQ13362 524 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 RAPGEF1Q13905 1077 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 SHROOM1Q2M3G4 852 aaPredicted RBP23.09■■□□□ 1.29
CCDC130-201ENST00000221554 FMNL3Q8IVF7 1028 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 VPS18Q9P253 973 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 MRPL11Q9Y3B7 192 aaKnown RBP23.09■■□□□ 1.29
CCDC130-201ENST00000221554 DAAM1Q9Y4D1 1078 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 UBE4BO95155 1302 aa23.09■■□□□ 1.29
CCDC130-201ENST00000221554 SCN9AQ15858 1988 aa23.08■■□□□ 1.29
CCDC130-201ENST00000221554 LRRIQ3A6PVS8 624 aaPredicted RBP23.08■■□□□ 1.29
CCDC130-201ENST00000221554 OPLAHO14841 1288 aa23.08■■□□□ 1.29
CCDC130-201ENST00000221554 PPP1R12BO60237 982 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms