RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 KRT9P35527 623 aa19.26■□□□□ 0.67
VRK1-201ENST00000216639 EDRF1Q3B7T1 1238 aa19.26■□□□□ 0.67
VRK1-201ENST00000216639 SFR1Q86XK3 245 aa19.26■□□□□ 0.67
VRK1-201ENST00000216639 KIF18AQ8NI77 898 aa19.26■□□□□ 0.67
VRK1-201ENST00000216639 PCMTD1Q96MG8 357 aaPredicted RBP19.26■□□□□ 0.67
VRK1-201ENST00000216639 LXNQ9BS40 222 aa19.26■□□□□ 0.67
VRK1-201ENST00000216639 RUSC1Q9BVN2 902 aa19.26■□□□□ 0.67
VRK1-201ENST00000216639 ACAD9Q9H845 621 aa19.26■□□□□ 0.67
VRK1-201ENST00000216639 LUC7L2Q9Y383 392 aaKnown RBP19.26■□□□□ 0.67
VRK1-201ENST00000216639 RIPK3Q9Y572 518 aa19.26■□□□□ 0.67
VRK1-201ENST00000216639 ADM5C9JUS6 153 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 DDX39AO00148 427 aaKnown RBP19.25■□□□□ 0.67
VRK1-201ENST00000216639 FAM13AO94988 1023 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 P4HBP07237 508 aaKnown RBP19.25■□□□□ 0.67
VRK1-201ENST00000216639 YBX3P16989 372 aaKnown RBP eCLIP19.25■□□□□ 0.676e-6■□□□□ 10.6
VRK1-201ENST00000216639 FECHP22830 423 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 TMEM132BQ14DG7 1078 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 MIIPQ5JXC2 388 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 USP50Q70EL3 339 aaPredicted RBP19.25■□□□□ 0.67
VRK1-201ENST00000216639 NELFCDQ8IXH7 590 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 ERGIC2Q96RQ1 377 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 ZSWIM4Q9H7M6 989 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 PKD2L1Q9P0L9 805 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 CCDC175P0C221 793 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 TRIM21P19474 475 aaKnown RBP19.25■□□□□ 0.67
VRK1-201ENST00000216639 CCDC40Q4G0X9 1142 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 CYP26C1Q6V0L0 522 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 C1orf186Q6ZWK4 172 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 NLRX1Q86UT6 975 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 OR8K1Q8NGG5 319 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 NSUN6Q8TEA1 469 aaKnown RBP19.25■□□□□ 0.67
VRK1-201ENST00000216639 FGFBP2Q9BYJ0 223 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 KCTD10Q9H3F6 313 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 NDST4Q9H3R1 872 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 MRPL44Q9H9J2 332 aaKnown RBP19.25■□□□□ 0.67
VRK1-201ENST00000216639 OLFML3Q9NRN5 406 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 SEL1LQ9UBV2 794 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 ODF2LQ9ULJ1 636 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 CAPN11Q9UMQ6 739 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 SAMM50Q9Y512 469 aa19.25■□□□□ 0.67
VRK1-201ENST00000216639 RLFQ13129 1914 aa19.24■□□□□ 0.67
VRK1-201ENST00000216639 POLR2AP24928 1970 aaKnown RBP19.24■□□□□ 0.67
VRK1-201ENST00000216639 ARHGEF35A5YM69 484 aa19.24■□□□□ 0.67
VRK1-201ENST00000216639 SPDYE16A6NNV3 312 aaPredicted RBP19.24■□□□□ 0.67
VRK1-201ENST00000216639 MAFGO15525 162 aa19.24■□□□□ 0.67
VRK1-201ENST00000216639 DHX15O43143 795 aaKnown RBP19.24■□□□□ 0.67
VRK1-201ENST00000216639 CALUO43852 315 aaPredicted RBP19.24■□□□□ 0.67
VRK1-201ENST00000216639 SYCP1Q15431 976 aa19.24■□□□□ 0.67
VRK1-201ENST00000216639 KNOP1Q1ED39 458 aaKnown RBP19.24■□□□□ 0.67
VRK1-201ENST00000216639 BANK1Q8NDB2 785 aa19.24■□□□□ 0.67
VRK1-201ENST00000216639 COL11A1P12107 1806 aaPredicted RBP19.24■□□□□ 0.67
VRK1-201ENST00000216639 LOXHD1Q8IVV2 1947 aa19.23■□□□□ 0.67
VRK1-201ENST00000216639 TESPA1A2RU30 521 aaPredicted RBP19.23■□□□□ 0.67
VRK1-201ENST00000216639 SOWAHDA6NJG2 315 aa19.23■□□□□ 0.67
VRK1-201ENST00000216639 CETN3O15182 167 aa19.23■□□□□ 0.67
VRK1-201ENST00000216639 JAK3P52333 1124 aa19.23■□□□□ 0.67
VRK1-201ENST00000216639 ITGB3BPQ13352 177 aaPredicted RBP19.23■□□□□ 0.67
VRK1-201ENST00000216639 PLS1Q14651 629 aa19.23■□□□□ 0.67
VRK1-201ENST00000216639 BMT2Q1RMZ1 405 aa19.23■□□□□ 0.67
VRK1-201ENST00000216639 FIGNQ5HY92 759 aa19.23■□□□□ 0.67
VRK1-201ENST00000216639 STXBP4Q6ZWJ1 553 aa19.23■□□□□ 0.67
VRK1-201ENST00000216639 EPM2AIP1Q7L775 607 aaPredicted RBP19.23■□□□□ 0.67
VRK1-201ENST00000216639 REXO1L1PQ8IX06 675 aa19.23■□□□□ 0.67
VRK1-201ENST00000216639 ZNF397Q8NF99 534 aaPredicted RBP19.23■□□□□ 0.67
VRK1-201ENST00000216639 ZC3H15Q8WU90 426 aaKnown RBP19.23■□□□□ 0.67
VRK1-201ENST00000216639 GPRASP2Q96D09 838 aa19.23■□□□□ 0.67
VRK1-201ENST00000216639 L3MBTL3Q96JM7 780 aaPredicted RBP19.23■□□□□ 0.67
VRK1-201ENST00000216639 PARVGQ9HBI0 331 aa19.23■□□□□ 0.67
VRK1-201ENST00000216639 TTC26A0AVF1 554 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 NR3C2P08235 984 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 SFNP31947 248 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 KRT76Q01546 638 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 PPATQ06203 517 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 TOGARAM2Q6ZUX3 1019 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 VSIG10LQ86VR7 867 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 MYCT1Q8N699 235 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 WDR90Q96KV7 1748 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.22■□□□□ 0.67
VRK1-201ENST00000216639 TRAF3IP3Q9Y228 551 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 A0A1W2PQJ5 194 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 RSPH10B2B2RC85 870 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 PDXKO00764 312 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 DYNC1I1O14576 645 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 RIOK3O14730 519 aaKnown RBP19.22■□□□□ 0.67
VRK1-201ENST00000216639 EIF3DO15371 548 aaKnown RBP eCLIP19.22■□□□□ 0.67
VRK1-201ENST00000216639 STAM2O75886 525 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 GCNT3O95395 438 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 RSPH10BP0C881 870 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 GUCY2CP25092 1073 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 GTF2F1P35269 517 aaKnown RBP eCLIP19.22■□□□□ 0.67
VRK1-201ENST00000216639 QARSP47897 775 aaKnown RBP19.22■□□□□ 0.67
VRK1-201ENST00000216639 MARSP56192 900 aaKnown RBP19.22■□□□□ 0.67
VRK1-201ENST00000216639 ADAM9Q13443 819 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 ZC3H3Q8IXZ2 948 aaKnown RBP19.22■□□□□ 0.67
VRK1-201ENST00000216639 ANKRD13AQ8IZ07 590 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 CHST13Q8NET6 341 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 CDHR1Q96JP9 859 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 DNAJC7Q99615 494 aa19.22■□□□□ 0.67
VRK1-201ENST00000216639 ZNHIT6Q9NWK9 470 aaKnown RBP19.22■□□□□ 0.67
VRK1-201ENST00000216639 CYP39A1Q9NYL5 469 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms