RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 GJB6O95452 261 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 C1SP09871 688 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 CR2P20023 1033 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 POLD1P28340 1107 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 NOLC1Q14978 699 aaKnown RBP eCLIP4.52□□□□□ -1.69
CDKN3-201ENST00000216414 KIZQ2M2Z5 673 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 SLC10A6Q3KNW5 377 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 ZMAT1Q5H9K5 638 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 KCNT2Q6UVM3 1135 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 RSPO2Q6UXX9 243 aaPredicted RBP4.52□□□□□ -1.69
CDKN3-201ENST00000216414 KCTD1Q719H9 257 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 MRRFQ96E11 262 aaKnown RBP4.52□□□□□ -1.69
CDKN3-201ENST00000216414 FAM89AQ96GI7 184 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 PLEKHG4BQ96PX9 1271 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 IKZF4Q9H2S9 585 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 C12orf65Q9H3J6 166 aaKnown RBP4.52□□□□□ -1.69
CDKN3-201ENST00000216414 CAPN10Q9HC96 672 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 SLC39A2Q9NP94 309 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 PRKAG3Q9UGI9 489 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 NR2E1Q9Y466 385 aa4.52□□□□□ -1.69
CDKN3-201ENST00000216414 A0A1W2PQU0 124 aa4.51□□□□□ -1.69
CDKN3-201ENST00000216414 DLX3O60479 287 aa4.51□□□□□ -1.69
CDKN3-201ENST00000216414 CUTAO60888 179 aa4.51□□□□□ -1.69
CDKN3-201ENST00000216414 DPTQ07507 201 aa4.51□□□□□ -1.69
CDKN3-201ENST00000216414 LBX2Q6XYB7 198 aa4.51□□□□□ -1.69
CDKN3-201ENST00000216414 Q6ZSN1 163 aa4.51□□□□□ -1.69
CDKN3-201ENST00000216414 VPS37DQ86XT2 251 aa4.51□□□□□ -1.69
CDKN3-201ENST00000216414 EPN3Q9H201 632 aa4.51□□□□□ -1.69
CDKN3-201ENST00000216414 SLC30A1Q9Y6M5 507 aa4.51□□□□□ -1.69
CDKN3-201ENST00000216414 ACOT7O00154 380 aa4.5□□□□□ -1.69
CDKN3-201ENST00000216414 PLSCR1O15162 318 aa4.5□□□□□ -1.69
CDKN3-201ENST00000216414 CAPNS1P04632 268 aa4.5□□□□□ -1.69
CDKN3-201ENST00000216414 ETFBP38117 255 aa4.5□□□□□ -1.69
CDKN3-201ENST00000216414 TOP3AQ13472 1001 aaPredicted RBP4.5□□□□□ -1.69
CDKN3-201ENST00000216414 DPP8Q6V1X1 898 aaPredicted RBP4.5□□□□□ -1.69
CDKN3-201ENST00000216414 DNAJC10Q8IXB1 793 aa4.5□□□□□ -1.69
CDKN3-201ENST00000216414 AMER2Q8N7J2 671 aa4.5□□□□□ -1.69
CDKN3-201ENST00000216414 IL17DQ8TAD2 202 aa4.5□□□□□ -1.69
CDKN3-201ENST00000216414 DCAF4Q8WV16 495 aa4.5□□□□□ -1.69
CDKN3-201ENST00000216414 PLA2G12BQ9BX93 195 aa4.5□□□□□ -1.69
CDKN3-201ENST00000216414 CD244Q9BZW8 370 aa4.5□□□□□ -1.69
CDKN3-201ENST00000216414 A0A087X1B8 175 aa4.49□□□□□ -1.69
CDKN3-201ENST00000216414 SOD2P04179 222 aa4.49□□□□□ -1.69
CDKN3-201ENST00000216414 ACRV1P26436 265 aa4.49□□□□□ -1.69
CDKN3-201ENST00000216414 EPHA5P54756 1037 aa4.49□□□□□ -1.69
CDKN3-201ENST00000216414 INHBCP55103 352 aa4.49□□□□□ -1.69
CDKN3-201ENST00000216414 NANOS3P60323 173 aaKnown RBP4.49□□□□□ -1.69
CDKN3-201ENST00000216414 GPR85P60893 370 aa4.49□□□□□ -1.69
CDKN3-201ENST00000216414 HSP90AA2PQ14568 343 aaPredicted RBP4.49□□□□□ -1.69
CDKN3-201ENST00000216414 WDR72Q3MJ13 1102 aa4.49□□□□□ -1.69
CDKN3-201ENST00000216414 IFNL3Q8IZI9 196 aa4.49□□□□□ -1.69
CDKN3-201ENST00000216414 ZNF808Q8N4W9 903 aaPredicted RBP4.49□□□□□ -1.69
CDKN3-201ENST00000216414 SCYL1Q96KG9 808 aa4.49□□□□□ -1.69
CDKN3-201ENST00000216414 PDGFDQ9GZP0 370 aaPredicted RBP4.49□□□□□ -1.69
CDKN3-201ENST00000216414 ARHGAP28Q9P2N2 729 aa4.49□□□□□ -1.69
CDKN3-201ENST00000216414 ZBTB7CA1YPR0 619 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 FAM47E-STBD1D6RA91 191 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 PRODHO43272 600 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 ADH4P08319 380 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 HIBADHP31937 336 aaKnown RBP4.48□□□□□ -1.69
CDKN3-201ENST00000216414 ETV4P43268 484 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 KCNQ1P51787 676 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 DBPQ10586 325 aaPredicted RBP4.48□□□□□ -1.69
CDKN3-201ENST00000216414 HABP4Q5JVS0 413 aaKnown RBP4.48□□□□□ -1.69
CDKN3-201ENST00000216414 BTBD8Q5XKL5 378 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 MAMDC4Q6UXC1 1216 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 CACTINQ8WUQ7 758 aaKnown RBP4.48□□□□□ -1.69
CDKN3-201ENST00000216414 AARSD1Q9BTE6 412 aaKnown RBP4.48□□□□□ -1.69
CDKN3-201ENST00000216414 KIAA1683Q9H0B3 1180 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 MMRN2Q9H8L6 949 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 IPPKQ9H8X2 491 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 TLR9Q9NR96 1032 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 ST7Q9NRC1 585 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 RIC8BQ9NVN3 520 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 PUF60Q9UHX1 559 aaKnown RBP4.48□□□□□ -1.69
CDKN3-201ENST00000216414 R3HCC1Q9Y3T6 440 aaKnown RBP4.48□□□□□ -1.69
CDKN3-201ENST00000216414 TNFRSF18Q9Y5U5 241 aa4.48□□□□□ -1.69
CDKN3-201ENST00000216414 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.47□□□□□ -1.69
CDKN3-201ENST00000216414 BLACEA4D250 179 aa4.47□□□□□ -1.69
CDKN3-201ENST00000216414 MATN2O00339 956 aa4.47□□□□□ -1.69
CDKN3-201ENST00000216414 ARHGAP6O43182 974 aa4.47□□□□□ -1.69
CDKN3-201ENST00000216414 HMGCRP04035 888 aa4.47□□□□□ -1.69
CDKN3-201ENST00000216414 MSX2P35548 267 aaPredicted RBP4.47□□□□□ -1.69
CDKN3-201ENST00000216414 RPS19P39019 145 aaKnown RBP4.47□□□□□ -1.69
CDKN3-201ENST00000216414 ADCY8P40145 1251 aa4.47□□□□□ -1.69
CDKN3-201ENST00000216414 TUBA3CQ13748 450 aa4.47□□□□□ -1.69
CDKN3-201ENST00000216414 NTRK3Q16288 839 aa4.47□□□□□ -1.69
CDKN3-201ENST00000216414 TBR1Q16650 682 aa4.47□□□□□ -1.69
CDKN3-201ENST00000216414 TUBA3EQ6PEY2 450 aa4.47□□□□□ -1.69
CDKN3-201ENST00000216414 ZFYVE21Q9BQ24 234 aa4.47□□□□□ -1.69
CDKN3-201ENST00000216414 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.47□□□□□ -1.69
CDKN3-201ENST00000216414 FOXL1Q12952 345 aa4.46□□□□□ -1.7
CDKN3-201ENST00000216414 DUSP8Q13202 625 aa4.46□□□□□ -1.7
CDKN3-201ENST00000216414 STYK1Q6J9G0 422 aa4.46□□□□□ -1.7
CDKN3-201ENST00000216414 SGMS1Q86VZ5 419 aa4.46□□□□□ -1.7
CDKN3-201ENST00000216414 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.46□□□□□ -1.7
CDKN3-201ENST00000216414 SH3RF2Q8TEC5 729 aa4.46□□□□□ -1.7
CDKN3-201ENST00000216414 ZNF483Q8TF39 744 aaPredicted RBP4.46□□□□□ -1.7
CDKN3-201ENST00000216414 NAF1Q96HR8 494 aaKnown RBP4.46□□□□□ -1.7
CDKN3-201ENST00000216414 CRAMP1Q96RY5 1269 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms