RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 CCDC39Q9UFE4 941 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 DACH1Q9UI36 760 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 PRR12Q9ULL5 1215 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 POLR2DO15514 142 aaKnown RBP13.75□□□□□ -0.21
SNU13-201ENST00000215956 HOXD11P31277 338 aaPredicted RBP13.75□□□□□ -0.21
SNU13-201ENST00000215956 NLRP12P59046 1061 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 ARMCX2Q7L311 632 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 OTOP2Q7RTS6 562 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 MICALL1Q8N3F8 863 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 C4orf32Q8N8J7 132 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 FGD4Q96M96 766 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 BPIFA3Q9BQP9 254 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 PANK2Q9BZ23 570 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 HIPK3Q9H422 1215 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 CUEDC2Q9H467 287 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 MAGEF1Q9HAY2 307 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 TUBE1Q9UJT0 475 aa13.75□□□□□ -0.21
SNU13-201ENST00000215956 MRPL11Q9Y3B7 192 aaKnown RBP13.75□□□□□ -0.21
SNU13-201ENST00000215956 LRRC37A2A6NM11 1700 aa13.74□□□□□ -0.21
SNU13-201ENST00000215956 UMODL1Q5DID0 1318 aa13.74□□□□□ -0.21
SNU13-201ENST00000215956 BECN2A8MW95 431 aa13.74□□□□□ -0.21
SNU13-201ENST00000215956 ATP2A1O14983 1001 aa13.74□□□□□ -0.21
SNU13-201ENST00000215956 PPP1R11O60927 126 aaPredicted RBP13.74□□□□□ -0.21
SNU13-201ENST00000215956 SLFN14P0C7P3 912 aa13.74□□□□□ -0.21
SNU13-201ENST00000215956 BMP1P13497 986 aa13.74□□□□□ -0.21
SNU13-201ENST00000215956 USP11P51784 963 aa13.74□□□□□ -0.21
SNU13-201ENST00000215956 TFF2Q03403 129 aa13.74□□□□□ -0.21
SNU13-201ENST00000215956 POSTNQ15063 836 aa13.74□□□□□ -0.21
SNU13-201ENST00000215956 PPP2R2DQ66LE6 453 aa13.74□□□□□ -0.21
SNU13-201ENST00000215956 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.74□□□□□ -0.21
SNU13-201ENST00000215956 CPXCR1Q8N123 301 aa13.74□□□□□ -0.21
SNU13-201ENST00000215956 RANBP17Q9H2T7 1088 aaKnown RBP13.74□□□□□ -0.21
SNU13-201ENST00000215956 ABCB11O95342 1321 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 SPDYE3A6NKU9 549 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 SMTNL1A8MU46 457 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 SLC26A4O43511 780 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 MYL1P05976 194 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 UBA7P41226 1012 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 RABGGTBP53611 331 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 NKX3-2P78367 333 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 BEX3Q00994 111 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 SEMA3FQ13275 785 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 AAK1Q2M2I8 961 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 CT47A1Q5JQC4 288 aaPredicted RBP13.73□□□□□ -0.21
SNU13-201ENST00000215956 ANKRD35Q8N283 1001 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 SAMD3Q8N6K7 520 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 PRPF38AQ8NAV1 312 aaKnown RBP13.73□□□□□ -0.21
SNU13-201ENST00000215956 SLC43A3Q8NBI5 491 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 SMARCE1Q969G3 411 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 CCSER1Q9C0I3 900 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 STK24Q9Y6E0 443 aa13.73□□□□□ -0.21
SNU13-201ENST00000215956 PIK3CDO00329 1044 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 ZBED4O75132 1171 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 CCL23P55773 120 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 GRIN1Q05586 938 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 CALCRLQ16602 461 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 LONRF3Q496Y0 759 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 SPECC1Q5M775 1068 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 CXCL17Q6UXB2 119 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 RASSF8Q8NHQ8 419 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 GTPBP4Q9BZE4 634 aaKnown RBP13.72□□□□□ -0.21
SNU13-201ENST00000215956 KATNBL1Q9H079 304 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 DNAJC25Q9H1X3 360 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 CBX8Q9HC52 389 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 RAVER2Q9HCJ3 691 aaKnown RBP13.72□□□□□ -0.21
SNU13-201ENST00000215956 SERTAD1Q9UHV2 236 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 CTDP1Q9Y5B0 961 aaPredicted RBP13.72□□□□□ -0.21
SNU13-201ENST00000215956 SLC4A7Q9Y6M7 1214 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 SCN5AQ14524 2016 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 WNT7AO00755 349 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 ACTN4O43707 911 aaKnown RBP13.72□□□□□ -0.21
SNU13-201ENST00000215956 MARCH6O60337 910 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 MYOGP15173 224 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 KCNQ1P51787 676 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 SKIV2LQ15477 1246 aaKnown RBP13.72□□□□□ -0.21
SNU13-201ENST00000215956 HS1BP3Q53T59 392 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 CHST13Q8NET6 341 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 KIFC2Q96AC6 838 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 DHX58Q96C10 678 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 NOC4LQ9BVI4 516 aaKnown RBP13.72□□□□□ -0.21
SNU13-201ENST00000215956 ANO3Q9BYT9 981 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 WNT8AQ9H1J5 351 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 SLC38A10Q9HBR0 1119 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 TMEM260Q9NX78 707 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 FBXO40Q9UH90 709 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 PCDHA11Q9Y5I1 949 aa13.72□□□□□ -0.21
SNU13-201ENST00000215956 ASTN1O14525 1302 aa13.71□□□□□ -0.21
SNU13-201ENST00000215956 BRWD1Q9NSI6 2320 aa13.71□□□□□ -0.21
SNU13-201ENST00000215956 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.71□□□□□ -0.22
SNU13-201ENST00000215956 ADAMTS3O15072 1205 aa13.71□□□□□ -0.22
SNU13-201ENST00000215956 CABYRO75952 493 aa13.71□□□□□ -0.22
SNU13-201ENST00000215956 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.22
SNU13-201ENST00000215956 TNFAIP2Q03169 654 aa13.71□□□□□ -0.22
SNU13-201ENST00000215956 ITGA7Q13683 1181 aa13.71□□□□□ -0.22
SNU13-201ENST00000215956 PDIA5Q14554 519 aa13.71□□□□□ -0.22
SNU13-201ENST00000215956 UBE2SQ16763 222 aa13.71□□□□□ -0.22
SNU13-201ENST00000215956 NT5DC1Q5TFE4 455 aa13.71□□□□□ -0.22
SNU13-201ENST00000215956 TLK2Q86UE8 772 aa13.71□□□□□ -0.22
SNU13-201ENST00000215956 MCF2L2Q86YR7 1114 aa13.71□□□□□ -0.22
SNU13-201ENST00000215956 CALML4Q96GE6 196 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms