RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 MAGEA9P43362 315 aa18.46■□□□□ 0.55
ITGB4-201ENST00000200181 DYNC1I2Q13409 638 aaKnown RBP18.46■□□□□ 0.55
ITGB4-201ENST00000200181 CAPRIN1Q14444 709 aaKnown RBP18.46■□□□□ 0.55
ITGB4-201ENST00000200181 NR1H4Q96RI1 486 aaPredicted RBP18.46■□□□□ 0.55
ITGB4-201ENST00000200181 SMYD3Q9H7B4 428 aa18.46■□□□□ 0.55
ITGB4-201ENST00000200181 HLA-DPA1P20036 260 aa18.46■□□□□ 0.55
ITGB4-201ENST00000200181 PPARGP37231 505 aaPredicted RBP18.46■□□□□ 0.55
ITGB4-201ENST00000200181 SCNN1DP51172 638 aa18.46■□□□□ 0.55
ITGB4-201ENST00000200181 TEDDM1Q5T9Z0 273 aa18.46■□□□□ 0.55
ITGB4-201ENST00000200181 VSTM4Q8IW00 320 aa18.46■□□□□ 0.55
ITGB4-201ENST00000200181 COG4Q9H9E3 785 aa18.46■□□□□ 0.55
ITGB4-201ENST00000200181 SFMBT1Q9UHJ3 866 aa18.46■□□□□ 0.55
ITGB4-201ENST00000200181 ZFP69BQ9UJL9 534 aa18.46■□□□□ 0.55
ITGB4-201ENST00000200181 WDR64B1ANS9 1081 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 KRT37O76014 449 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 EMBQ6PCB8 327 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 SNX19Q92543 992 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 FAF2Q96CS3 445 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 TEX12Q9BXU0 123 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 hCG_2014768A0A024R1R8 64 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 CHGBP05060 677 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 STAT2P52630 851 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 UBXN2AP68543 259 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 C1orf146Q5VVC0 180 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 GRAMD1CQ8IYS0 662 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 VPS39Q96JC1 886 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 LMCD1Q9NZU5 365 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 NXF1Q9UBU9 619 aaKnown RBP18.45■□□□□ 0.54
ITGB4-201ENST00000200181 FAM135BQ49AJ0 1406 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 MYL1P05976 194 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 ZFXP17010 805 aaPredicted RBP18.45■□□□□ 0.54
ITGB4-201ENST00000200181 ABCB5Q2M3G0 1257 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 ACAD11Q709F0 780 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 EXOC8Q8IYI6 725 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 EIF4A1P60842 406 aaKnown RBP18.45■□□□□ 0.54
ITGB4-201ENST00000200181 KCNV2Q8TDN2 545 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 PANX2Q96RD6 677 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 SAYSD1Q9NPB0 183 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 PAMP19021 973 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 ABCD1P33897 745 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 RWDD2BP57060 319 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 ASPRV1Q53RT3 343 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 SSH3Q8TE77 659 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 EAF2Q96CJ1 260 aaPredicted RBP18.45■□□□□ 0.54
ITGB4-201ENST00000200181 RMDN2Q96LZ7 410 aa18.45■□□□□ 0.54
ITGB4-201ENST00000200181 MRPL40Q9NQ50 206 aaKnown RBP18.45■□□□□ 0.54
ITGB4-201ENST00000200181 TADA2BQ86TJ2 420 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 RNF26Q9BY78 433 aaPredicted RBP18.44■□□□□ 0.54
ITGB4-201ENST00000200181 HACD3Q9P035 362 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 FRA10AC1Q70Z53 315 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 HSPH1Q92598 858 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 PALMDQ9NP74 551 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 EIF4E1BA6NMX2 242 aaKnown RBP18.44■□□□□ 0.54
ITGB4-201ENST00000200181 RASGRP4Q8TDF6 673 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 FAM96AQ9H5X1 160 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 ITM2BQ9Y287 266 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 ZWILCHQ9H900 591 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 SAMSN1Q9NSI8 373 aaKnown RBP18.44■□□□□ 0.54
ITGB4-201ENST00000200181 KRT4P19013 534 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 CD58P19256 250 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 NSUN2Q08J23 767 aaKnown RBP eCLIP18.44■□□□□ 0.54
ITGB4-201ENST00000200181 NAF1Q96HR8 494 aaKnown RBP18.44■□□□□ 0.54
ITGB4-201ENST00000200181 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.44■□□□□ 0.54
ITGB4-201ENST00000200181 CCDC90BQ9GZT6 254 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 CHCHD3Q9NX63 227 aaKnown RBP18.44■□□□□ 0.54
ITGB4-201ENST00000200181 STOML1Q9UBI4 398 aa18.44■□□□□ 0.54
ITGB4-201ENST00000200181 ANP32DO95626 131 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 MYO1EQ12965 1108 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 KRT33BQ14525 404 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 WDR11Q9BZH6 1224 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 DNAJC6O75061 913 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 GNL1P36915 607 aaPredicted RBP18.43■□□□□ 0.54
ITGB4-201ENST00000200181 BZW1Q7L1Q6 419 aaKnown RBP18.43■□□□□ 0.54
ITGB4-201ENST00000200181 RAPGEF5Q92565 580 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 KIF17Q9P2E2 1029 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 NCKAP5LQ9HCH0 1330 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 PAPOLAP51003 745 aaKnown RBP18.43■□□□□ 0.54
ITGB4-201ENST00000200181 HDAC4P56524 1084 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 ARL13BQ3SXY8 428 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 ZBTB33Q86T24 672 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 OR9Q1Q8NGQ5 310 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 SPATA17Q96L03 361 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 DIS3Q9Y2L1 958 aaKnown RBP18.43■□□□□ 0.54
ITGB4-201ENST00000200181 PI4K2BG5E9Z4 385 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 MYO1CO00159 1063 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 CHUKO15111 745 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 GCFC2P16383 781 aaKnown RBP18.43■□□□□ 0.54
ITGB4-201ENST00000200181 ICE2Q659A1 982 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 HEXIM2Q96MH2 286 aaKnown RBP18.43■□□□□ 0.54
ITGB4-201ENST00000200181 LSG1Q9H089 658 aaKnown RBP18.43■□□□□ 0.54
ITGB4-201ENST00000200181 KLC2Q9H0B6 622 aa18.43■□□□□ 0.54
ITGB4-201ENST00000200181 CTIFO43310 598 aaKnown RBP18.42■□□□□ 0.54
ITGB4-201ENST00000200181 ESRRBO95718 433 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 MXI1P50539 228 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 PDCLQ13371 301 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 NBPF9Q3BBW0 867 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 SZRD1Q7Z422 152 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 KPNA7A9QM74 516 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 PODXLO00592 558 aa18.42■□□□□ 0.54
ITGB4-201ENST00000200181 FGGP02679 453 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms