RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 RREB1Q92766 1687 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 ATP2C2O75185 946 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 ECM2O94769 699 aaPredicted RBP11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 KIF4AO95239 1232 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 LDHCP07864 332 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 HSPA9P38646 679 aaKnown RBP11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 PTK2Q05397 1052 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 KCNH2Q12809 1159 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 TMEM119Q4V9L6 283 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 NAIF1Q69YI7 327 aaPredicted RBP11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 TRIM59Q8IWR1 403 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 CCDC65Q8IXS2 484 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 ISCUQ9H1K1 167 aa11.51□□□□□ -0.57
CX3CL1-201ENST00000006053 SLC9A1P19634 815 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 GPBP1Q86WP2 473 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 ARFGAP2Q8N6H7 521 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 PSMD1Q99460 953 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 JPH2Q9BR39 696 aaPredicted RBP11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 PCDHA12Q9UN75 941 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 ROBO3Q96MS0 1386 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 SART1O43290 800 aaKnown RBP11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 FSBPO95073 299 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 FAM107AO95990 144 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 ORC2Q13416 577 aaPredicted RBP11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 SLC10A5Q5PT55 438 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 TCERG1LQ5VWI1 586 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 C16orf86Q6ZW13 317 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 ZNF571Q7Z3V5 609 aaPredicted RBP11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 CEP63Q96MT8 703 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 NEUROG2Q9H2A3 272 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 DOT1LQ8TEK3 1739 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 ESYT2A0FGR8 921 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 POTEB3A0JP26 581 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 POTECB2RU33 542 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 KRIT1O00522 736 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 CETN3O15182 167 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 GNA14O95837 355 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 PDHBP11177 359 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 POTEBQ6S5H4 581 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 CCDC121Q6ZUS5 278 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 LRRC45Q96CN5 670 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 CYFIP2Q96F07 1278 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 TRIM31Q9BZY9 425 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 DPH5Q9H2P9 285 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 CD248Q9HCU0 757 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 PLCB1Q9NQ66 1216 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 AMACRQ9UHK6 382 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 FBXL5Q9UKA1 691 aa11.5□□□□□ -0.57
CX3CL1-201ENST00000006053 COL22A1Q8NFW1 1626 aaPredicted RBP11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 GOLGA6L7A0A1B0GV03 622 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 DAPK3O43293 454 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 RAD21O60216 631 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 PLA2G4BP0C869 781 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 NR2F2P24468 414 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 FLT3P36888 993 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 PPP4CP60510 307 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 UAP1Q16222 522 aaPredicted RBP11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 DCAF17Q5H9S7 520 aaPredicted RBP11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 ALKBH5Q6P6C2 394 aaKnown RBP11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 SCFD1Q8WVM8 642 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 HAS1Q92839 578 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 CCDC114Q96M63 670 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 NYXQ9GZU5 481 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 GANQ9H2C0 597 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 RIOX1Q9H6W3 641 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 AIPL1Q9NZN9 384 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 NOVA2Q9UNW9 492 aaKnown RBP11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 NOC2LQ9Y3T9 749 aaKnown RBP11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 ITGA4P13612 1032 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 NT5C2P49902 561 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 USP11P51784 963 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 SF3A3Q12874 501 aaKnown RBP eCLIP11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 PEX26Q7Z412 305 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 METTL13Q8N6R0 699 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 RTFDC1Q9BY42 306 aaPredicted RBP11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 HDAC9Q9UKV0 1011 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 SNED1Q8TER0 1413 aa11.49□□□□□ -0.57
CX3CL1-201ENST00000006053 PGRMC1O00264 195 aaKnown RBP11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 ECHS1P30084 290 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 SLC16A2P36021 539 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 ZNF844Q08AG5 666 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 PICALMQ13492 652 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 NFIXQ14938 502 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 PPP4R3AQ6IN85 833 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 TPTE2Q6XPS3 522 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 CCDC13Q8IYE1 715 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 PBKQ96KB5 322 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 STRCQ7RTU9 1775 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 GMNCA6NCL1 334 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 CUL1Q13616 776 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 ARHGAP27Q6ZUM4 889 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 CELF4Q9BZC1 486 aaKnown RBP11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 TMEM59LQ9UK28 342 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 ATXN2Q99700 1313 aaKnown RBP11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 MYBP10242 640 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 STAT3P40763 770 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 ACTN3Q08043 901 aaPredicted RBP11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 IFI16Q16666 785 aaKnown RBP11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 QPCTQ16769 361 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms