RNA–Protein interactions for RNA: ENSMUST00000221041.1

Trim9-205, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 3,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-205ENSMUST00000221041 Slc9b1Q8C0X2 565 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 Dcaf8Q8N7N5 591 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 NkapQ9D0F4 415 aaKnown RBP11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 AatfQ9JKX4 526 aaKnown RBP11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 PfasQ5SUR0 1337 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 DgkkE9Q7N4 1118 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 XlrP05531 208 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 Mgat1P27808 447 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 Aimp1P31230 310 aaKnown RBP11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 Gjb6P70689 261 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 Kcnd1Q03719 651 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 ItgaeQ60677 1167 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 Erlin2Q8BFZ9 340 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 Gprasp2Q8BUY8 826 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 Kcnv2Q8CFS6 562 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 Ago4Q8CJF8 861 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 PpanQ91YU8 470 aaKnown RBP11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 Tmem192Q9CXT7 266 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 EcsitQ9QZH6 435 aa11.51□□□□□ -0.57
Trim9-205ENSMUST00000221041 Xirp1O70373 1129 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Got1P05201 413 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Vcam1P29533 739 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Tubb4bP68372 445 aaKnown RBP11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Tubb5P99024 444 aaKnown RBP11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Kctd16Q5DTY9 427 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Tm4sf1Q64302 202 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Stxbp2Q64324 593 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Slc51bQ80WK2 128 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Cyp26b1Q811W2 512 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Fam228aQ8CDW1 299 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Plcg2Q8CIH5 1265 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Ces4aQ8R0W5 563 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 CbsQ91WT9 561 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Mis12Q9CY25 206 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Olr1Q9EQ09 363 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Zranb2Q9R020 330 aaKnown RBP11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Hebp1Q9R257 190 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Myh4Q5SX39 1939 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Fgd3O88842 733 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Lmntd2Q0VET5 664 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Armc6Q8BNU0 468 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Lrrc45Q8CIM1 670 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Pop1Q8K205 1045 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Ciapin1Q8WTY4 309 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Adgrf5G5E8Q8 1348 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Nwd2Q6P5U7 1742 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 CnpP16330 420 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 ArP19091 899 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Gna14P30677 355 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 SpopQ6ZWS8 374 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Fam53cQ8BXQ8 393 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Dnajc14Q921R4 703 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Rpf2Q9JJ80 306 aaKnown RBP11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Hs6st3Q9QYK4 470 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Znf394Q9Z1D9 521 aa11.5□□□□□ -0.57
Trim9-205ENSMUST00000221041 Ubr2Q6WKZ8 1755 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Gm8298J3QPI0 401 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Pde4aO89084 844 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Tnnc1P19123 161 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Lig1P37913 916 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 NntQ61941 1086 aaKnown RBP11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Lrrn2Q6PHP6 730 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Nucks1Q80XU3 234 aaKnown RBP11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Calhm4Q8CE93 315 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Usp33Q8R5K2 909 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Lrp6O88572 1613 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Sclt1G5E861 688 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Psmd14O35593 310 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Axin2O88566 840 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Krt19P19001 403 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Cdc25aP48964 514 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 YdjcQ14BV6 310 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Hook2Q7TMK6 716 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Ppm1eQ80TL0 749 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Depdc1aQ8CIG0 804 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Ddx39aQ8VDW0 427 aaKnown RBP11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Fsip1Q9D3V5 435 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Krt36B1AQ75 473 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Atp13a3Q5XF89 1219 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Nell2Q61220 819 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Acad11Q80XL6 779 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Pym1Q8CHP5 203 aaKnown RBP11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Rpap2Q8VC34 614 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 JcadQ5DTX6 1320 aa11.49□□□□□ -0.57
Trim9-205ENSMUST00000221041 Tnrc6cQ3UHC0 1690 aaKnown RBP11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 Sema3fO88632 785 aa11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 VimP20152 466 aaKnown RBP11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 Stat4P42228 749 aa11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 Meis2P97367 477 aa11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 Cep126Q0VBV7 1103 aa11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 PRAG1Q571I4 1179 aa11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 Tom1l2Q5SRX1 507 aa11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 Als2cr12Q8BVM7 383 aa11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 Btbd7Q8CFE5 1130 aa11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 Q922C1 641 aa11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 Cd2bp2Q9CWK3 342 aaKnown RBP11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 Fam111aQ9D2L9 613 aa11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 Drap1Q9D6N5 205 aa11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 Cdc42ep4Q9JM96 349 aaKnown RBP11.48□□□□□ -0.57
Trim9-205ENSMUST00000221041 AaasP58742 546 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms