RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 CbsQ91WT9 561 aa17.15■□□□□ 0.34
Sdc1-205ENSMUST00000171158 Pabpc6Q9D4E6 643 aaKnown RBP17.15■□□□□ 0.34
Sdc1-205ENSMUST00000171158 IkQ9Z1M8 557 aaKnown RBP17.15■□□□□ 0.34
Sdc1-205ENSMUST00000171158 NynrinQ5DTZ0 1840 aa17.14■□□□□ 0.34
Sdc1-205ENSMUST00000171158 Serpinc1P32261 465 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Kiaa0319Q5SZV5 1081 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 BcrQ6PAJ1 1270 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 NfrkbQ6PIJ4 1296 aaKnown RBP17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Igsf3Q6ZQA6 1194 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 F13a1Q8BH61 732 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Parp10Q8CIE4 960 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Tmem132aQ922P8 1018 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Nxnl2Q9D531 156 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Ubiad1Q9DC60 336 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Usp14Q9JMA1 493 aaKnown RBP17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Lypla2Q9WTL7 231 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Nhej1Q3KNJ2 295 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Slc10a5Q5PT54 434 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Spag7Q7TNE3 227 aaKnown RBP17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Phf20Q8BLG0 1010 aaKnown RBP17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Il17cQ8K4C5 194 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 CrygnQ8VHL5 183 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Eps8l2Q99K30 729 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Acot3Q9QYR7 432 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 BcamQ9R069 622 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Tjp2Q9Z0U1 1167 aaKnown RBP17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Eya4Q9Z191 616 aa17.14■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Odf2A3KGV1 830 aaKnown RBP17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Ap1b1O35643 943 aaKnown RBP17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Rbm46P86049 533 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Lrriq3Q14DL3 633 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Dcaf17Q3TUL7 519 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Nt5c2Q3V1L4 560 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Epha7Q61772 998 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Bola2Q8BGS2 86 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 TxlnbQ8VBT1 685 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Q91Z58 1206 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Smco2Q9DA21 347 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 CenphQ9QYM8 241 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Tcp10bE9PYJ0 438 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Npr3P70180 536 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Ogfod1Q3U0K8 545 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Six2Q62232 296 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Peg10Q7TN75 958 aaKnown RBP17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Coa7Q921H9 231 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Phtf1Q9QZ09 761 aa17.13■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Pja1O55176 578 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 P4hbP09103 509 aaKnown RBP17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Csf1rP09581 977 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 FechP22315 420 aaKnown RBP17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Klra9Q2TJJ8 266 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 P2ry10Q8BFU7 328 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Tbc1d10cQ8C9V1 444 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Calhm4Q8CE93 315 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Trex1Q91XB0 314 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Pstpip2Q99M15 334 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Calr3Q9D9Q6 380 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Q9DAQ4 598 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Frmpd3A0A140LIW3 1774 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Zfp408H7BX78 710 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Grik5Q61626 979 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Kif5bQ61768 963 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Ddx3xQ62167 662 aaKnown RBP17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 IarsQ8BU30 1262 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 CnstQ8CBC4 711 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Ube2sQ921J4 223 aa17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Cwc15Q9JHS9 229 aaKnown RBP17.12■□□□□ 0.33
Sdc1-205ENSMUST00000171158 GabreA2AMW3 916 aa17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Muc3aQ3U5A2 218 aa17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Dph1Q5NCQ5 438 aa17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Krt31Q61765 416 aa17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Ccdc148Q6P5U8 527 aa17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Gpr101Q80T62 511 aa17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Ccdc113Q8C5T8 377 aa17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Ago4Q8CJF8 861 aa17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Spats2Q8K1N4 545 aaKnown RBP17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Mrpl11Q9CQF0 192 aaKnown RBP17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Galnt15Q9D2N8 638 aa17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Borcs6Q9D6W8 360 aa17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Scgb2b12S4R2L0 112 aa17.11■□□□□ 0.33
Sdc1-205ENSMUST00000171158 1700016G14RikA0A286YCZ6 238 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Kcnu1O54982 1121 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 RargP18911 458 aaKnown RBP17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Rpl13P47963 211 aaKnown RBP17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Sh3gl2Q62420 352 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Cypt2Q6P924 180 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Q6PD19 689 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Acad11Q80XL6 779 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 SucoQ8C341 1250 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Bzw2Q91VK1 419 aaKnown RBP17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Q9D5Q8 446 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Arhgef7Q9ES28 862 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Lrrc38A2VDH3 298 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 CnpP16330 420 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Gna15P30678 374 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Scarf1Q5ND28 820 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Cd37Q61470 281 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Vgll2Q8BGW8 322 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Yars2Q8BYL4 472 aaKnown RBP17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Bcas3Q8CCN5 928 aa17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms