RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Atp5hQ9DCX2 161 aa11.02□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ddx24Q9ESV0 857 aaKnown RBP11.02□□□□□ -0.65
Lig4-201ENSMUST00000095476 Atp6v1g2Q9WTT4 118 aa11.02□□□□□ -0.65
Lig4-201ENSMUST00000095476 Rsbn1lD3Z0K6 821 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ttc17E9PVB5 1198 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Phldb3E9QAF4 648 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Cdcp1Q5U462 833 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ptk6Q64434 451 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Sec23ipQ6NZC7 998 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Gtf2ird1Q9JI57 1104 aaKnown RBP11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Pus7B7ZNL8 666 aaKnown RBP11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Gm20721E9Q2U8 318 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 StrnO55106 780 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Tubgcp3P58854 905 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Arl1P61211 181 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ankfy1Q810B6 1169 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 QarsQ8BML9 775 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Serpinb10Q8K1K6 397 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Usp33Q8R5K2 909 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ccdc65Q8VHI7 493 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ncoa5Q91W39 579 aaKnown RBP11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ciao1Q99KN2 339 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Alpk1Q9CXB8 1231 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Rbm31yQ9D3U4 565 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Arl6ip4Q9JM93 229 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Tarbp1E9Q368 1579 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 AceP09470 1312 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Akap5D3YVF0 745 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Nr1i3O35627 358 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Q32P12 615 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Plbd2Q3TCN2 594 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Apol7eQ3UZ24 369 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Oxr1Q4KMM3 866 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ythdf3Q8BYK6 585 aaKnown RBP11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 E4f1Q8CCE9 783 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Parp10Q8CIE4 960 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ddx25Q9QY15 484 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Adgrf5G5E8Q8 1348 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Exoc4O35382 975 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 PorP37040 678 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Znf667Q2TL60 609 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Trmt1Q3TX08 663 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Madcam1Q61826 405 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Haus6Q6NV99 933 aaKnown RBP11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Xlr3bQ6P205 226 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Papd7Q6PB75 542 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Olfr118Q7TRJ6 321 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ccdc169Q8BXX9 214 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ephb1Q8CBF3 984 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 CoasyQ9DBL7 563 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Diaph3Q9Z207 1171 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Mtmr7Q9Z2C9 660 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Atp10aO54827 1508 aa11.01□□□□□ -0.65
Lig4-201ENSMUST00000095476 Cyp3a57D3YYZ0 503 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Gm1661E9Q963 441 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 LmnaP48678 665 aaKnown RBP11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Gpc4P51655 557 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Spag6Q3V0U9 509 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ccnl1Q52KE7 532 aaKnown RBP11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Rab3ipQ68EF0 428 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Tlr11Q6R5P0 926 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Ssx2ipQ8VC66 615 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Tceal1Q921P9 165 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Bzw1Q9CQC6 419 aaKnown RBP11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Mis18aQ9CZJ6 204 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Rcan1Q9JHG6 198 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Gipc1Q9Z0G0 333 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Rims1Q99NE5 1463 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 MaeaQ4VC33 396 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Tlr13Q6R5N8 991 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 PicalmQ7M6Y3 660 aaKnown RBP11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Dzip3Q7TPV2 1204 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Grtp1Q9D3N8 359 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 PudpQ9D5U5 234 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Phkg2Q9DB30 406 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Rilpl1Q9JJC6 406 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Iqca1lA6H690 825 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Mapkapk5O54992 473 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Pbxip1Q3TVI8 727 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 PzpQ61838 1495 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Tmcc1Q69ZZ6 649 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Klhdc10Q6PAR0 439 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Actn1Q7TPR4 892 aaKnown RBP11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Inpp5fQ8CDA1 1132 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 C1qtnf1Q9QXP7 281 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Tex21Q9R0U9 575 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Wdr19Q3UGF1 1341 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 DgkkE9Q7N4 1118 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Tac1P41539 130 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 GscQ02591 256 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Sap30bpQ02614 308 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Lrrc43Q3V0L5 667 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Lrig2Q52KR2 1054 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Gprasp2Q8BUY8 826 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Cep95Q8BVV7 827 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Klra17Q9JMA4 273 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Nr2e3Q9QXZ7 395 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 RecqlQ9Z129 648 aa11□□□□□ -0.65
Lig4-201ENSMUST00000095476 Itpripl1A2ASA8 547 aa10.99□□□□□ -0.65
Lig4-201ENSMUST00000095476 Rabgap1lA6H6A9 815 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms