RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ice2Q3UZ18 988 aaKnown RBP14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Stxbp3Q60770 592 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Krt14Q61781 484 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Lca5Q80ST9 704 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 E330017A01RikQ8BU47 192 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Slf1Q8R3P9 1054 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 MagohbQ9CQL1 146 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Fam133bQ9CVI2 245 aaKnown RBP14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ddx20Q9JJY4 825 aaKnown RBP14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Nlrp5Q9R1M5 1163 aa14.69□□□□□ -0.06
Nup88-201ENSMUST00000035283 Map7d1A2AJI0 846 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 R3hdm1E9Q9Q2 1135 aaKnown RBP14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Copb2O55029 905 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Mucl2P02815 138 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 KhsrpQ3U0V1 748 aaKnown RBP14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Agxt2Q3UEG6 513 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Tspyl5Q69ZB3 406 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Gga2Q6P5E6 603 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Aldh5a1Q8BWF0 523 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Chn1Q91V57 459 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Mis12Q9CY25 206 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 4931423N10RikQ9D4J9 382 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Cul1Q9WTX6 776 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Dnaaf5B9EJR8 853 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Atp6v0a2P15920 856 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Serpinc1P32261 465 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Znf367Q0VDT2 340 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Dcaf17Q3TUL7 519 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Rapgef1Q3UHC1 1224 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Zdhhc24Q6IR37 284 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Rps6ka6Q7TPS0 764 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Gpcpd1Q8C0L9 675 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 SltmQ8CH25 1031 aaKnown RBP14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Bud13Q8R149 637 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Q8VDP2 222 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Pramef12Q9D2F1 463 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 ArcQ9WV31 396 aa14.68□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ltbp2O08999 1813 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Myh10Q61879 1976 aaKnown RBP14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Fam171a1A2ATK9 892 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 MtrA6H5Y3 1253 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Zfp213E9QAW0 468 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Cpsf2O35218 782 aaKnown RBP14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Slurp2P0DP59 97 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ddr1Q03146 911 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ankrd13aQ80UP5 588 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ddx10Q80Y44 875 aaKnown RBP14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Chtf18Q8BIW9 969 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Sgms1Q8VCQ6 419 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Dr1Q91WV0 176 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Josd2Q9CR30 188 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ddah1Q9CWS0 285 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Gm382B1AXN3 1250 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Exoc4O35382 975 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Psmc6P62334 389 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Pls1Q3V0K9 630 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Lrrc36Q3V0M2 755 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Meis1Q60954 390 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ccdc189Q6NZQ0 333 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ppp2r2aQ6P1F6 447 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Lrrc45Q8CIM1 670 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Slc51aQ8R000 340 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Cog1Q9Z160 980 aa14.67□□□□□ -0.06
Nup88-201ENSMUST00000035283 Scgb2b7D3YYY1 112 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ercc5P35689 1170 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Sap30bpQ02614 308 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Rgs9bpQ148R9 237 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Klra9Q2TJJ8 266 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Kif22Q3V300 660 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Gm5935Q497S0 212 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 KhnynQ80U38 671 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Mxd3Q80US8 206 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ccdc134Q8C7V8 229 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Gle1Q8R322 699 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Galnt15Q9D2N8 638 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 NapaQ9DB05 295 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Tmem191cQ9JJB1 302 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Ltbp4Q8K4G1 1666 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Cetn3O35648 167 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Sema3eP70275 775 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Atp8a1P70704 1164 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Fbln1Q08879 705 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Glra4Q61603 456 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Mcf2lQ64096 1149 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Myo6Q64331 1265 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Xlr3bQ6P205 226 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 HhatQ8BMT9 499 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Mtmr4Q91XS1 1190 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Rfc4Q99J62 364 aa14.66□□□□□ -0.06
Nup88-201ENSMUST00000035283 Senp1P59110 640 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Trim43cP86449 446 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 MyrflQ3UN70 904 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Sin3bQ62141 1098 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Llgl1Q80Y17 1036 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Gpr180Q8BPS4 441 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Bcas3Q8CCN5 928 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 CbsQ91WT9 561 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Hyou1Q9JKR6 999 aaKnown RBP14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Slc26a4Q9R155 780 aa14.65□□□□□ -0.06
Nup88-201ENSMUST00000035283 Eftud2O08810 971 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms