RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Pla2g4cQ64GA5 597 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ttll4Q80UG8 1193 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ttll1Q91V51 423 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Pla2g4aP47713 748 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 LbrQ3U9G9 626 aaKnown RBP24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Spag6Q3V0U9 509 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Asap3Q5U464 904 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 TxlngQ8BHN1 524 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Vmn2r78K7N6U5 853 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Gjb6P70689 261 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ehd4Q9EQP2 541 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Thumpd3P97770 505 aa24.83■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Adat2Q6P6J0 191 aa24.83■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Rfx6Q8C7R7 927 aa24.83■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Adcy7P51829 1099 aa24.83■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Sesn2P58043 480 aa24.83■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Mphosph8Q3TYA6 858 aaKnown RBP24.83■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Gnl3Q8CI11 538 aaKnown RBP24.83■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Magi2Q9WVQ1 1275 aa24.83■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 CoblQ5NBX1 1337 aaKnown RBP24.83■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Madcam1Q61826 405 aa24.83■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ino80dQ66JY2 873 aaKnown RBP24.83■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ccdc80Q8R2G6 949 aa24.83■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ms4a2P20490 235 aa24.83■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 TwistnbQ78WZ7 330 aaKnown RBP24.83■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Gm4841E9QAA8 417 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Pdha1P35486 390 aaKnown RBP24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Cmtm5Q9D6G9 156 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 4933406M09RikG3XA12 479 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Ccdc159Q8C963 411 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Prpsap1Q9D0M1 356 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 FancaQ9JL70 1439 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Eno1P17182 434 aaKnown RBP24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Dab2ipQ3UHC7 1189 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Ncoa4Q5U4H9 625 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Rpa3Q9CQ71 121 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Snf8Q9CZ28 258 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 PigoQ9JJI6 1093 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Angptl2Q9R045 493 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 ScocQ78YZ6 125 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Q8C5C9 218 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Klhl41A2AUC9 606 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Wdr27Q8C5V5 780 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Arfip2Q8K221 341 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 St13Q99L47 371 aaKnown RBP24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Ccdc22Q9JIG7 627 aa24.82■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Pcyt1aP49586 367 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Fra10ac1Q8BP78 315 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Dclre1bQ8C7W7 541 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Rabgef1Q9JM13 491 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Iqcj-Schip1A0A088MLT8 559 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Schip1P0DPB4 484 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 D1Pas1P16381 660 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Tmod1P49813 359 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 E2f8Q58FA4 860 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Uap1Q91YN5 522 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 DnttP09838 530 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Trim72Q1XH17 477 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Cyp7b1Q60991 507 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Sap130Q8BIH0 1057 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Bag5Q8CI32 447 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Tor1aip1Q921T2 595 aaKnown RBP24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Ttc17E9PVB5 1198 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Ube2oQ6ZPJ3 1288 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Emilin1Q99K41 1017 aa24.81■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 SelenovD3YXG1 328 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Exoc4O35382 975 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 TrhQ62361 256 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Yars2Q8BYL4 472 aaKnown RBP24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Stx19Q8R1Q0 292 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Tceal1Q921P9 165 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Abt1Q9QYL7 269 aaKnown RBP24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 PalmdQ9JHU2 551 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Pja1O55176 578 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Gpr182P43142 395 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Ndufa13Q9ERS2 144 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Slc40a1Q9JHI9 570 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Kcng1A2BDX4 514 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Serpina3iD3Z450 408 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Vmn2r79E9Q067 851 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Trpa1Q8BLA8 1125 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Mroh6V9GX81 722 aa24.8■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Slc4a1P04919 929 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Upf3bQ3ULL6 472 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 AsnsQ61024 561 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Tmem63cQ8CBX0 802 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Gfpt1P47856 697 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Ulk3Q3U3Q1 472 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Pcdhb14Q6PB90 796 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Snx5Q9D8U8 404 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Gtf2iQ9ESZ8 998 aaKnown RBP24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Nckap5lQ6GQX2 1323 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Carmil3Q3UFQ8 1375 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Dynlt1P51807 113 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Q3KNL4 93 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Caln1Q9JJG7 219 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 CtifQ6PEE2 600 aaKnown RBP24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Nlrp4aQ8BU40 982 aa24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 LRWD1Q8BUI3 648 aaKnown RBP24.79■■□□□ 1.56
Sh3rf1-201ENSMUST00000034060 Ubxn11Q9D572 484 aa24.79■■□□□ 1.56
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms