RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Grin3bQ91ZU9 1003 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Dhx58Q99J87 678 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Apopt1Q9CQW7 192 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 D430041D05RikF6ZGR6 1678 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tspyl1O88852 379 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tcp1P11983 556 aaKnown RBP11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 CnpP16330 420 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ano9P86044 747 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Cyp2e1Q05421 493 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Psmd1Q3TXS7 953 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Sh3gl3Q62421 347 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Dnph1Q80VJ3 173 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ttc26Q8BS45 554 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Hook3Q8BUK6 718 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Arhgef7Q9ES28 862 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Angptl3Q9R182 455 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ctnna1P26231 906 aaKnown RBP11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Pik3caP42337 1068 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Znf827Q505G8 1078 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Stkld1Q80YS9 662 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Spata21Q8BHW6 681 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Iffo1Q8BXL9 562 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tmem63cQ8CBX0 802 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gle1Q8R322 699 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 CalcbQ99MP3 130 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ndst4Q9EQW8 872 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Stk32bQ9JJX8 414 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Psma7Q9Z2U0 248 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tldc2A2ACG1 198 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ncf2O70145 525 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Fam207aP58468 219 aaKnown RBP11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Foxd1Q61345 456 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Cep95Q8BVV7 827 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Spice1Q8C804 860 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Stoml1Q8CI66 399 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Eif3hQ91WK2 352 aaKnown RBP11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Arl6ip4Q9JM93 229 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Add1Q9QYC0 735 aaKnown RBP11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Psmd10Q9Z2X2 231 aa11.81□□□□□ -0.52
Msh3-201ENSMUST00000022220 Cetn1P41209 172 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gm5169Q5M8P2 212 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ppp1r1bQ60829 194 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Crybg3Q80W49 1005 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Hirip3Q8BLH7 601 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Trim9Q8C7M3 817 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Rbm41Q8JZV4 413 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Taf6lQ8R2K4 616 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ubxn2aQ99KJ0 258 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tex19.1Q99MV2 351 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Lztr1Q9CQ33 837 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Cst12Q9DAN8 128 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 FibpQ9JI19 357 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Git2Q9JLQ2 708 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Wdr19Q3UGF1 1341 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Fbxl16A2RT62 479 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Magea6O89010 325 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Kif5cP28738 956 aaKnown RBP11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Rnpc3Q3UZ01 514 aaKnown RBP11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 DeptorQ570Y9 409 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Zcwpw1Q6IR42 630 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Magea3Q6T340 320 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 SpopQ6ZWS8 374 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gga3Q8BMI3 718 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Vps52Q8C754 723 aaKnown RBP11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Shisa4Q8CA71 197 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gramd4Q8CB44 633 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Serpinb13Q8CDC0 389 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 4930519G04RikQ9CPT7 205 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Josd2Q9CR30 188 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gucy1a3Q9ERL9 691 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Cetn2Q9R1K9 172 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Frmpd4A2AFR3 1320 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Shank2Q80Z38 1476 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Wnt7aP24383 349 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Lmntd2Q0VET5 664 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Otud5Q3U2S4 566 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Bola2Q8BGS2 86 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Aldh5a1Q8BWF0 523 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Slc35f6Q8VE96 372 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Trub2Q91WG3 331 aaKnown RBP11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Smc6Q924W5 1097 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Abcf2Q99LE6 628 aaKnown RBP11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Itga2bQ9QUM0 1033 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gm10110D3Z5M2 615 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Svs3aF2Z472 265 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gdap1O88741 358 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 GmpsQ3THK7 693 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Olfr121Q5CZY0 321 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Q8C5C9 218 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Pla2g12bQ99P27 195 aa11.8□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gm15262A0A140LIQ5 728 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Q3TTJ4 293 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Sec31aQ3UPL0 1230 aaKnown RBP11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Naif1Q6PFD7 327 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Arhgef19Q8BWA8 802 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Shtn1Q8K2Q9 631 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Sash3Q8K352 380 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 BlmhQ8R016 455 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tmem134Q8R0J4 195 aa11.79□□□□□ -0.52
Msh3-201ENSMUST00000022220 Eif4a3Q91VC3 411 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms