RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Dhx38Q80X98 1228 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Kirrel3Q8BR86 778 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tada3Q8R0L9 432 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Slc35f6Q8VE96 372 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tmco4Q91WU4 631 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Afg3l1Q920A7 789 aaKnown RBP9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tceal1Q921P9 165 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Crlf3Q9Z2L7 442 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Peg3Q3URU2 1571 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Mast1Q9R1L5 1570 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 HpdP49429 393 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tcp11Q01755 566 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 C87499Q3UX49 493 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Adgrg6Q6F3F9 1165 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Unc5clQ6R653 518 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Alkbh8Q80Y20 664 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Trim32Q8CH72 655 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Fbxo18Q8K2I9 1042 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Usp15Q8R5H1 981 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Atp1a1Q8VDN2 1023 aaKnown RBP9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 WaslQ91YD9 501 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Def8Q99J78 448 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Pold4Q9CWP8 107 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Mei1Q9D4I2 1268 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 4930449I24RikQ9D5E3 319 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Caln1Q9JJG7 219 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Add2Q9QYB8 725 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Shcbp1Q9Z179 668 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Lrrc32G3XA59 663 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 CatspereP0DP43 985 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ces1eQ64176 562 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 MarsQ68FL6 902 aaKnown RBP9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Znf598Q80YR4 908 aaKnown RBP9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 AarsQ8BGQ7 968 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Lig4Q8BTF7 911 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tspyl4Q8VD63 406 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 ScgnQ91WD9 276 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Arhgef40Q3UPH7 1517 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gimd1E9PW74 217 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Vmn2r79E9Q067 851 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Eef2kO08796 724 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Pik3r1P26450 724 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 InscQ3HNM7 579 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 RetsatQ64FW2 609 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Kiaa1841Q68FF0 718 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Smg5Q6ZPY2 1017 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ddx42Q810A7 929 aaKnown RBP9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Trim52Q8CDV4 233 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Med21Q9CQ39 144 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tmem206Q9D771 350 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cnpy3Q9DAU1 276 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ap2b1Q9DBG3 937 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Zscan12Q9Z1D7 501 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Iqcj-Schip1A0A088MLT8 559 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Erich2E9Q1A6 463 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gm3248K7N721 186 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 SfnO70456 248 aaKnown RBP9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Schip1P0DPB4 484 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gad1P48318 593 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 RnaselQ05921 735 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Srek1ip1Q4V9W2 153 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 DbnlQ62418 436 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 AsphQ8BSY0 741 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ube2q2Q8K2Z8 378 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Slc12a8Q8VI23 705 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ubxn11Q9D572 484 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Mgea5Q9EQQ9 916 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Txnrd1Q9JMH6 613 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Add3Q9QYB5 706 aaKnown RBP9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 FscbA1EGX6 1074 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rfx8D3YU81 596 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cyp11b1Q3TG86 501 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Znf12Q7TSI0 686 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Serpinb3aG3X9V8 387 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Lipo1J3QME6 396 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gm13103Q4VAD2 491 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Brd2Q7JJ13 798 aaKnown RBP9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rpf1Q7TND5 349 aaKnown RBP9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tbc1d22bQ80VE5 505 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ctdspl2Q8BG15 465 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tmem179Q8BHH9 233 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 AbraQ8BUZ1 375 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ddx19bQ8BZY3 494 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ephb1Q8CBF3 984 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Hdac11Q91WA3 347 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 ArpinQ9D0A3 226 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 IkbipQ9DBZ1 373 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rbp7Q9EPC5 134 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Erich3F6QRE9 1637 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gm11985A0A1B0GS61 206 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Crnkl1P63154 690 aaKnown RBP9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gsdmc4Q3TR54 480 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Slc9a2Q3ZAS0 814 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Igsf3Q6ZQA6 1194 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ckap2lQ7TS74 745 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Vipas39Q8BGQ1 491 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rfx6Q8C7R7 927 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ccdc77Q9CZH8 489 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rmi1Q9D4G9 616 aa9.81□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ddx25Q9QY15 484 aa9.81□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms