RNA–Protein interactions for RNA: tF(GAA)M

tF(GAA)M, Transcript of Phenylalanine tRNA (tRNA-Phe), predicted by tRNAscan-SE analysis, yeastyeast

Gene tF(GAA)M, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tF(GAA)MtF(GAA)M CIC1P38779 376 aaKnown RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YHR127WP38833 243 aaKnown RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M TIF11P38912 153 aaKnown RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M LYS9P38999 446 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M MEF2P39677 819 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M BOL3P39724 118 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M AST2P39945 430 aaKnown RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YEL075CP39972 122 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YEL028WP39989 153 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YER010CP40011 234 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M DDI1P40087 428 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M NEO1P40527 1151 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M OSW7P43611 510 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M GUS1P46655 708 aaKnown RBP RIP-Chip data0.59□□□□□ -2.31not detected
tF(GAA)MtF(GAA)M MNN11P46985 422 aaKnown RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M STE24P47154 453 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M TCB2P48231 1178 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M STR3P53101 465 aaKnown RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M CRH1P53301 507 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M SLI1P53304 468 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M OGG1P53397 376 aaPredicted RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YNR021WP53723 404 aaKnown RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YNR064CP53750 290 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M JJJ1P53863 590 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M SAM50P53969 484 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M REX2P54964 269 aaKnown RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M RPL6AQ02326 176 aaKnown RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YPL107WQ02873 248 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M NGL2Q03264 515 aaKnown RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M DIG2Q03373 323 aaKnown RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YDR249CQ03787 373 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M PPM1Q04081 328 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YDR514CQ04408 483 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M GTB1Q04924 702 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YLR297WQ05899 129 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M SWC7Q06707 132 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YPR097WQ06839 1073 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M RLP24Q07915 199 aaKnown RBP0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M IRC25Q07951 179 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M LCL2Q08045 131 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YPL199CQ08954 240 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M USV1Q12132 391 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M UBX3Q12229 455 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M YLL054CQ12244 843 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M RNH203Q12338 110 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M OCA6Q12454 224 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M SET6Q12529 373 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M VPS5Q92331 675 aa0.59□□□□□ -2.31
tF(GAA)MtF(GAA)M HSP82P02829 709 aaKnown RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M GDH1P07262 454 aaKnown RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M RPL20AP0CX23 172 aaKnown RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M RPL20BP0CX24 172 aaPredicted RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M SAM35P14693 329 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M HNM1P19807 563 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M GPI12P23797 304 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M YSP3P25036 478 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M RNA14P25298 677 aaKnown RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M PRE4P30657 266 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M MRPL9P31334 269 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M ACH1P32316 526 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M YPS1P32329 569 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M ASF1P32447 279 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M HXT3P32466 567 aaKnown RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M SMC1P32908 1225 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M PEX5P35056 612 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M YPT52P36018 234 aaKnown RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M APT2P36973 181 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M MRPL16P38064 232 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M RIB1P38066 345 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M LDB7P38210 180 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M GPI18P38211 433 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M CCZ1P38273 704 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M MET30P39014 640 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M MIT1P40002 666 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M SHO1P40073 367 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M YER189WP40104 122 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M MID1P41821 548 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M LEM3P42838 414 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M IRC7P43623 340 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M ALB1P47019 175 aaPredicted RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M APS3P47064 194 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M BNA1P47096 177 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M JSN1P47135 1091 aaKnown RBP RIP-Chip data0.58□□□□□ -2.32not detected
tF(GAA)MtF(GAA)M APT1P49435 187 aaKnown RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M ATP22P50273 684 aaPredicted RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M UBC13P52490 153 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M KAP114P53067 1004 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M HOP2P53187 214 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M DRN1P53255 507 aaKnown RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M MTM1P53320 366 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M CAB4P53332 305 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M COS1P53822 381 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M ELA1P53861 379 aaPredicted RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M MRPL19P53875 158 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M KTR5P53966 522 aaPredicted RBP0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M HXT11P54862 567 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M BET4Q00618 327 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M OSH6Q02201 448 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M NGL3Q03210 505 aa0.58□□□□□ -2.32
tF(GAA)MtF(GAA)M YMR279CQ03263 540 aa0.58□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms