RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C NQM1P53228 333 aaPredicted RBP5.08□□□□□ -1.6
RAT1YOR048C ZRG17P53735 605 aa5.08□□□□□ -1.6
RAT1YOR048C SMA1Q02651 245 aa5.08□□□□□ -1.6
RAT1YOR048C ECM11Q04110 302 aa5.08□□□□□ -1.6
RAT1YOR048C PLM2Q04383 521 aa5.08□□□□□ -1.6
RAT1YOR048C SMF3Q12078 473 aaPredicted RBP5.08□□□□□ -1.6
RAT1YOR048C AAC1P04710 309 aa5.07□□□□□ -1.6
RAT1YOR048C MIH1P23748 554 aa5.07□□□□□ -1.6
RAT1YOR048C CLB3P24870 427 aa5.07□□□□□ -1.6
RAT1YOR048C YCL049CP25577 312 aa5.07□□□□□ -1.6
RAT1YOR048C HXT4P32467 576 aa5.07□□□□□ -1.6
RAT1YOR048C RMA1P36001 430 aaKnown RBP5.07□□□□□ -1.6
RAT1YOR048C YKL077WP36081 392 aa5.07□□□□□ -1.6
RAT1YOR048C TSL1P38427 1098 aaKnown RBP5.07□□□□□ -1.6
RAT1YOR048C STP2P38704 541 aa5.07□□□□□ -1.6
RAT1YOR048C HXT6P39003 570 aaKnown RBP5.07□□□□□ -1.6
RAT1YOR048C HXT7P39004 570 aa5.07□□□□□ -1.6
RAT1YOR048C EMP65P40085 556 aa5.07□□□□□ -1.6
RAT1YOR048C QDR2P40474 542 aa5.07□□□□□ -1.6
RAT1YOR048C IMO32P53219 342 aa5.07□□□□□ -1.6
RAT1YOR048C YNL260CP53846 198 aa5.07□□□□□ -1.6
RAT1YOR048C YPL071CQ02864 156 aa5.07□□□□□ -1.6
RAT1YOR048C FDC1Q03034 503 aa5.07□□□□□ -1.6
RAT1YOR048C YMR206WQ03695 313 aa5.07□□□□□ -1.6
RAT1YOR048C MFB1Q04922 465 aa5.07□□□□□ -1.6
RAT1YOR048C YOL036WQ08206 761 aa5.07□□□□□ -1.6
RAT1YOR048C URA3P03962 267 aa5.07□□□□□ -1.6
RAT1YOR048C AIM10P39965 576 aaKnown RBP5.07□□□□□ -1.6
RAT1YOR048C FMP52P40008 231 aa5.07□□□□□ -1.6
RAT1YOR048C SER3P40054 469 aa5.07□□□□□ -1.6
RAT1YOR048C PAC11P40960 533 aa5.07□□□□□ -1.6
RAT1YOR048C ECL1P48235 211 aa5.07□□□□□ -1.6
RAT1YOR048C MNT2P53059 558 aa5.07□□□□□ -1.6
RAT1YOR048C AIM14P53109 570 aa5.07□□□□□ -1.6
RAT1YOR048C ARX1Q03862 593 aaKnown RBP5.07□□□□□ -1.6
RAT1YOR048C RPC11Q04307 110 aaPredicted RBP5.07□□□□□ -1.6
RAT1YOR048C SWF1Q04629 336 aa5.07□□□□□ -1.6
RAT1YOR048C TIR4Q12218 487 aaPredicted RBP5.07□□□□□ -1.6
RAT1YOR048C SUS1Q6WNK7 96 aa5.07□□□□□ -1.6
RAT1YOR048C KIN28P06242 306 aa5.07□□□□□ -1.6
RAT1YOR048C IDH1P28834 360 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
RAT1YOR048C ARC19P33204 171 aaKnown RBP5.07□□□□□ -1.6
RAT1YOR048C MKS1P34072 584 aa5.07□□□□□ -1.6
RAT1YOR048C CTF8P38877 133 aa5.07□□□□□ -1.6
RAT1YOR048C MLH1P38920 769 aa5.07□□□□□ -1.6
RAT1YOR048C IES5P40060 125 aa5.07□□□□□ -1.6
RAT1YOR048C GID8P40208 455 aa5.07□□□□□ -1.6
RAT1YOR048C LYS5P50113 272 aa5.07□□□□□ -1.6
RAT1YOR048C NBP35P52920 328 aa5.07□□□□□ -1.6
RAT1YOR048C NPY1P53164 384 aa5.07□□□□□ -1.6
RAT1YOR048C YGR079WP53249 370 aa5.07□□□□□ -1.6
RAT1YOR048C MEP3P53390 489 aa5.07□□□□□ -1.6
RAT1YOR048C RRN5Q02983 363 aa5.07□□□□□ -1.6
RAT1YOR048C SVL3Q03088 825 aaKnown RBP5.07□□□□□ -1.6
RAT1YOR048C RBS1Q05672 457 aaKnown RBP5.07□□□□□ -1.6
RAT1YOR048C NMA1Q06178 401 aaKnown RBP5.07□□□□□ -1.6
RAT1YOR048C SKS1Q12505 502 aa5.07□□□□□ -1.6
RAT1YOR048C TY1A-DR4O74302 440 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-AP0CX57 440 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-PR1P0CX58 440 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-ORP0CX59 440 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-PR2P0CX60 440 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-DR5P0CX65 440 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-ER2P0CX66 440 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-GR3P0CX67 440 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-LR1P0CX68 440 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-MR2P0CX69 440 aa5.06□□□□□ -1.6
RAT1YOR048C YHR035WP38769 630 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-JR2P47099 440 aa5.06□□□□□ -1.6
RAT1YOR048C IBA57P47158 497 aa5.06□□□□□ -1.6
RAT1YOR048C KXD1P53158 218 aa5.06□□□□□ -1.6
RAT1YOR048C JAC1P53193 184 aa5.06□□□□□ -1.6
RAT1YOR048C IRC15Q02733 499 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-DR1Q03856 440 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-ML1Q04706 440 aaKnown RBP5.06□□□□□ -1.6
RAT1YOR048C SPO77Q06134 477 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-BRQ12217 440 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-NL2Q12470 440 aa5.06□□□□□ -1.6
RAT1YOR048C TY1A-GR2Q12485 440 aa5.06□□□□□ -1.6
RAT1YOR048C YEL009C-AA0A023PZF2 135 aa5.06□□□□□ -1.6
RAT1YOR048C RAS1P01119 309 aa5.06□□□□□ -1.6
RAT1YOR048C HIP1P06775 603 aa5.06□□□□□ -1.6
RAT1YOR048C PRE4P30657 266 aa5.06□□□□□ -1.6
RAT1YOR048C SNC1P31109 117 aa5.06□□□□□ -1.6
RAT1YOR048C NTH1P32356 751 aa5.06□□□□□ -1.6
RAT1YOR048C SRY1P36007 326 aa5.06□□□□□ -1.6
RAT1YOR048C MDM31P38880 579 aa5.06□□□□□ -1.6
RAT1YOR048C YJL218WP40892 196 aaKnown RBP5.06□□□□□ -1.6
RAT1YOR048C YML108WQ03759 105 aa5.06□□□□□ -1.6
RAT1YOR048C YMR034CQ05131 434 aaPredicted RBP5.06□□□□□ -1.6
RAT1YOR048C YLR012CQ07927 99 aa5.06□□□□□ -1.6
RAT1YOR048C SKI7Q08491 747 aaPredicted RBP5.06□□□□□ -1.6
RAT1YOR048C PNS1Q12412 539 aa5.06□□□□□ -1.6
RAT1YOR048C YOS9Q99220 542 aa5.06□□□□□ -1.6
RAT1YOR048C TAO3P40468 2376 aa5.05□□□□□ -1.6
RAT1YOR048C PDE2P06776 526 aa5.05□□□□□ -1.6
RAT1YOR048C MET8P15807 274 aa5.05□□□□□ -1.6
RAT1YOR048C ERD1P16151 362 aa5.05□□□□□ -1.6
RAT1YOR048C SEN2P16658 377 aa5.05□□□□□ -1.6
RAT1YOR048C COQ8P27697 501 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms