RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	MER1	P16523	270 aa		13.63	□□□□□ -0.23
SHR5	YOL110W	CHA1	P25379	360 aa	Known RBP	13.63	□□□□□ -0.23
SHR5	YOL110W	DMC1	P25453	334 aa		13.63	□□□□□ -0.23
SHR5	YOL110W	CDC3	P32457	520 aa	Known RBP	13.63	□□□□□ -0.23
SHR5	YOL110W	PET112	P33893	541 aa		13.63	□□□□□ -0.23
SHR5	YOL110W	SWH1	P35845	1188 aa		13.63	□□□□□ -0.23
SHR5	YOL110W	YBR238C	P38330	731 aa	Known RBP	13.63	□□□□□ -0.23
SHR5	YOL110W	TAF3	Q12297	353 aa		13.63	□□□□□ -0.23
SHR5	YOL110W	YKL033W-A	Q86ZR7	236 aa		13.63	□□□□□ -0.23
SHR5	YOL110W	HTS1	P07263	546 aa	Known RBP	13.62	□□□□□ -0.23
SHR5	YOL110W	PUT2	P07275	575 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	STE6	P12866	1290 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	URA4	P20051	364 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	SLY41	P22215	453 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	MRPL15	P36523	253 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	RIB1	P38066	345 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	ZTA1	P38230	334 aa	Known RBP	13.62	□□□□□ -0.23
SHR5	YOL110W	YEL020C	P39994	560 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	YJL068C	P40363	299 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	QDR2	P40474	542 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	CSL4	P53859	292 aa	Predicted RBP	13.62	□□□□□ -0.23
SHR5	YOL110W	ASI2	P53895	289 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	NAM8	Q00539	523 aa	Known RBP	13.62	□□□□□ -0.23
SHR5	YOL110W	NDL1	Q06568	189 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	YOL036W	Q08206	761 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	RRT8	Q08219	342 aa		13.62	□□□□□ -0.23
SHR5	YOL110W	YCR006C	P25350	157 aa		13.61	□□□□□ -0.23
SHR5	YOL110W	NTG1	P31378	399 aa		13.61	□□□□□ -0.23
SHR5	YOL110W	SPC34	P36131	295 aa		13.61	□□□□□ -0.23
SHR5	YOL110W	VHR1	P40522	640 aa		13.61	□□□□□ -0.23
SHR5	YOL110W	STE24	P47154	453 aa		13.61	□□□□□ -0.23
SHR5	YOL110W	YGR012W	P53206	393 aa		13.61	□□□□□ -0.23
SHR5	YOL110W	IGO1	P53897	168 aa		13.61	□□□□□ -0.23
SHR5	YOL110W	SPR6	Q01684	191 aa		13.61	□□□□□ -0.23
SHR5	YOL110W	DBP9	Q06218	594 aa	Known RBP	13.61	□□□□□ -0.23
SHR5	YOL110W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	13.61	□□□□□ -0.23	not detected
SHR5	YOL110W	SKS1	Q12505	502 aa		13.61	□□□□□ -0.23
SHR5	YOL110W	SEC39	Q12745	709 aa		13.61	□□□□□ -0.23
SHR5	YOL110W	YOL159C-A	Q3E769	90 aa		13.61	□□□□□ -0.23
SHR5	YOL110W	ZWF1	P11412	505 aa	Known RBP	13.6	□□□□□ -0.23
SHR5	YOL110W	SNF4	P12904	322 aa		13.6	□□□□□ -0.23
SHR5	YOL110W	DBP3	P20447	523 aa	Known RBP	13.6	□□□□□ -0.23
SHR5	YOL110W	BUD14	P27637	709 aa		13.6	□□□□□ -0.23
SHR5	YOL110W	SLM4	P38247	162 aa		13.6	□□□□□ -0.23
SHR5	YOL110W	TPA1	P40032	644 aa	Known RBP	13.6	□□□□□ -0.23
SHR5	YOL110W	ELP2	P42935	788 aa		13.6	□□□□□ -0.23
SHR5	YOL110W	YJR142W	P47173	342 aa		13.6	□□□□□ -0.23
SHR5	YOL110W	TRM9	P49957	279 aa		13.6	□□□□□ -0.23
SHR5	YOL110W	MRK1	P50873	501 aa		13.6	□□□□□ -0.23
SHR5	YOL110W	ATF2	P53296	535 aa		13.6	□□□□□ -0.23
SHR5	YOL110W	ERG13	P54839	491 aa	Known RBP	13.6	□□□□□ -0.23
SHR5	YOL110W	REC102	Q02721	264 aa		13.6	□□□□□ -0.23
SHR5	YOL110W	HOT1	Q03213	719 aa		13.6	□□□□□ -0.23
SHR5	YOL110W	YMR310C	Q04867	317 aa	Predicted RBP	13.6	□□□□□ -0.23
SHR5	YOL110W	YOR019W	Q99248	730 aa		13.6	□□□□□ -0.23
SHR5	YOL110W	ACC1	Q00955	2233 aa	Known RBP	13.59	□□□□□ -0.23
SHR5	YOL110W	TIM9	O74700	87 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	GAL4	P04386	881 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	RPB5	P20434	215 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	RPS1B	P23248	255 aa	Known RBP	13.59	□□□□□ -0.23
SHR5	YOL110W	CLB4	P24871	460 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	ARE1	P25628	610 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	CMK1	P27466	446 aa	Known RBP	13.59	□□□□□ -0.23
SHR5	YOL110W	MKK1	P32490	508 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	SWD1	P39706	426 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	YIL086C	P40503	102 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	SNL1	P40548	159 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	AGP3	P43548	558 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	TIM54	P47045	478 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	VMA10	P48836	114 aa	Known RBP	13.59	□□□□□ -0.23
SHR5	YOL110W	UBC9	P50623	157 aa	Predicted RBP	13.59	□□□□□ -0.23
SHR5	YOL110W	CDH1	P53197	566 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	SPO77	Q06134	477 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	YEH1	Q07804	573 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	FDH1	Q08911	376 aa		13.59	□□□□□ -0.23
SHR5	YOL110W	SEN1	Q00416	2231 aa	Known RBP	13.59	□□□□□ -0.23
SHR5	YOL110W	MF(ALPHA)1	P01149	165 aa		13.58	□□□□□ -0.24
SHR5	YOL110W	SUI3	P09064	285 aa	Known RBP	13.58	□□□□□ -0.24
SHR5	YOL110W	TED1	P40533	473 aa		13.58	□□□□□ -0.24
SHR5	YOL110W	HOS2	P53096	452 aa	Predicted RBP	13.58	□□□□□ -0.24
SHR5	YOL110W	YNL181W	P53878	407 aa		13.58	□□□□□ -0.24
SHR5	YOL110W	MCA1	Q08601	432 aa		13.58	□□□□□ -0.24
SHR5	YOL110W	YOR342C	Q12182	319 aa		13.58	□□□□□ -0.24
SHR5	YOL110W	CSF1	Q12150	2958 aa		13.58	□□□□□ -0.24
SHR5	YOL110W	FBA1	P14540	359 aa	Known RBP	13.57	□□□□□ -0.24
SHR5	YOL110W	DAL82	P21705	255 aa		13.57	□□□□□ -0.24
SHR5	YOL110W	LHP1	P33399	275 aa	Known RBP	13.57	□□□□□ -0.24
SHR5	YOL110W	MSN2	P33748	704 aa		13.57	□□□□□ -0.24
SHR5	YOL110W	MDJ1	P35191	511 aa		13.57	□□□□□ -0.24
SHR5	YOL110W	OCA5	P38738	679 aa		13.57	□□□□□ -0.24
SHR5	YOL110W	RPS12	P48589	143 aa	Known RBP	13.57	□□□□□ -0.24
SHR5	YOL110W	YGR079W	P53249	370 aa		13.57	□□□□□ -0.24
SHR5	YOL110W	VIK1	Q12045	647 aa		13.57	□□□□□ -0.24
SHR5	YOL110W	SFM1	Q12314	213 aa		13.57	□□□□□ -0.24
SHR5	YOL110W	GPH1	P06738	902 aa	Known RBP	13.56	□□□□□ -0.24
SHR5	YOL110W	GRR1	P24814	1151 aa		13.56	□□□□□ -0.24
SHR5	YOL110W	ELP4	Q02884	456 aa	Known RBP	13.56	□□□□□ -0.24
SHR5	YOL110W	RRN5	Q02983	363 aa		13.56	□□□□□ -0.24
SHR5	YOL110W	PUS7	Q08647	676 aa	Known RBP	13.56	□□□□□ -0.24
SHR5	YOL110W	APE2	P32454	952 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms