RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W PRD1P25375 712 aa2.72□□□□□ -1.97
SIN3YOL004W GYP6P32806 458 aa2.72□□□□□ -1.97
SIN3YOL004W NTC20P38302 140 aaPredicted RBP2.72□□□□□ -1.97
SIN3YOL004W TDP1P38319 544 aa2.72□□□□□ -1.97
SIN3YOL004W PXA1P41909 870 aa2.72□□□□□ -1.97
SIN3YOL004W YGR127WP53275 312 aa2.72□□□□□ -1.97
SIN3YOL004W YPL107WQ02873 248 aa2.72□□□□□ -1.97
SIN3YOL004W VBA4Q04602 768 aaKnown RBP2.72□□□□□ -1.97
SIN3YOL004W ADE13Q05911 482 aaKnown RBP2.72□□□□□ -1.97
SIN3YOL004W YJR112W-AQ3E743 109 aa2.72□□□□□ -1.97
SIN3YOL004W RPS31P05759 152 aaKnown RBP2.72□□□□□ -1.97
SIN3YOL004W FPS1P23900 669 aa2.72□□□□□ -1.97
SIN3YOL004W YHL017WP38745 532 aa2.72□□□□□ -1.97
SIN3YOL004W SCS3P53012 380 aa2.72□□□□□ -1.97
SIN3YOL004W TIM11P81449 96 aaPredicted RBP2.72□□□□□ -1.97
SIN3YOL004W YPL068CQ02749 293 aa2.72□□□□□ -1.97
SIN3YOL004W MRPL1Q04599 285 aa2.72□□□□□ -1.97
SIN3YOL004W STP4Q07351 490 aa2.72□□□□□ -1.97
SIN3YOL004W YOL073CQ08232 322 aa2.72□□□□□ -1.97
SIN3YOL004W APC2Q12440 853 aa2.72□□□□□ -1.97
SIN3YOL004W STE2D6VTK4 431 aa2.72□□□□□ -1.97
SIN3YOL004W ARO3P14843 370 aaKnown RBP2.72□□□□□ -1.97
SIN3YOL004W PRP4P20053 465 aaKnown RBP2.72□□□□□ -1.97
SIN3YOL004W ARP2P32381 391 aaKnown RBP2.72□□□□□ -1.97
SIN3YOL004W YSC83P32792 385 aa2.72□□□□□ -1.97
SIN3YOL004W CAK1P43568 368 aaPredicted RBP2.72□□□□□ -1.97
SIN3YOL004W IDS2P46958 469 aa2.72□□□□□ -1.97
SIN3YOL004W YJR039WP47107 1121 aa2.72□□□□□ -1.97
SIN3YOL004W RAI1P53063 387 aaKnown RBP2.72□□□□□ -1.97
SIN3YOL004W YGR045CP53229 120 aa2.72□□□□□ -1.97
SIN3YOL004W DCP2P53550 970 aaKnown RBP2.72□□□□□ -1.97
SIN3YOL004W NOP15P53927 220 aaPredicted RBP2.72□□□□□ -1.97
SIN3YOL004W PPM1Q04081 328 aa2.72□□□□□ -1.97
SIN3YOL004W DIA2Q08496 732 aaPredicted RBP2.72□□□□□ -1.97
SIN3YOL004W SLK19Q08581 821 aaKnown RBP2.72□□□□□ -1.97
SIN3YOL004W ALG6Q12001 544 aaKnown RBP2.72□□□□□ -1.97
SIN3YOL004W RIB2Q12362 591 aaKnown RBP2.72□□□□□ -1.97
SIN3YOL004W YLR149CQ99296 730 aa2.72□□□□□ -1.97
SIN3YOL004W RAD52P06778 471 aaKnown RBP2.71□□□□□ -1.98
SIN3YOL004W PET122P10355 254 aa2.71□□□□□ -1.98
SIN3YOL004W KAR3P17119 729 aa2.71□□□□□ -1.98
SIN3YOL004W PHO85P17157 305 aa2.71□□□□□ -1.98
SIN3YOL004W THR1P17423 357 aaKnown RBP2.71□□□□□ -1.98
SIN3YOL004W CPR2P23285 205 aa2.71□□□□□ -1.98
SIN3YOL004W SPS19P32573 292 aaKnown RBP2.71□□□□□ -1.98
SIN3YOL004W AFR1P33304 620 aa2.71□□□□□ -1.98
SIN3YOL004W SRB2P34162 210 aa2.71□□□□□ -1.98
SIN3YOL004W TUL1P36096 758 aa2.71□□□□□ -1.98
SIN3YOL004W FAT1P38225 669 aa2.71□□□□□ -1.98
SIN3YOL004W AIR1P40507 360 aaKnown RBP2.71□□□□□ -1.98
SIN3YOL004W YNL260CP53846 198 aa2.71□□□□□ -1.98
SIN3YOL004W SPG3Q04398 127 aaPredicted RBP2.71□□□□□ -1.98
SIN3YOL004W ELG1Q12050 791 aa2.71□□□□□ -1.98
SIN3YOL004W TFB5Q3E7C1 72 aaPredicted RBP2.71□□□□□ -1.98
SIN3YOL004W SCEIP03882 235 aa2.71□□□□□ -1.98
SIN3YOL004W RPS3P05750 240 aaKnown RBP2.71□□□□□ -1.98
SIN3YOL004W ADH7P25377 361 aa2.71□□□□□ -1.98
SIN3YOL004W FEN2P25621 512 aaKnown RBP2.71□□□□□ -1.98
SIN3YOL004W FET3P38993 636 aa2.71□□□□□ -1.98
SIN3YOL004W GLO1P50107 326 aa2.71□□□□□ -1.98
SIN3YOL004W IMA1P53051 589 aa2.71□□□□□ -1.98
SIN3YOL004W UBP2Q01476 1272 aa2.71□□□□□ -1.98
SIN3YOL004W YDR249CQ03787 373 aa2.71□□□□□ -1.98
SIN3YOL004W DET1Q99288 334 aaKnown RBP2.71□□□□□ -1.98
SIN3YOL004W MYO1P08964 1928 aa2.71□□□□□ -1.98
SIN3YOL004W PUT2P07275 575 aa2.71□□□□□ -1.98
SIN3YOL004W ACO1P19414 778 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
SIN3YOL004W AIM17P23180 465 aaKnown RBP2.71□□□□□ -1.98
SIN3YOL004W SED4P25365 1065 aa2.71□□□□□ -1.98
SIN3YOL004W BOS1P25385 244 aa2.71□□□□□ -1.98
SIN3YOL004W LTV1P34078 463 aa2.71□□□□□ -1.98
SIN3YOL004W YMC2P38087 329 aa2.71□□□□□ -1.98
SIN3YOL004W SRO77P38163 1010 aa2.71□□□□□ -1.98
SIN3YOL004W VPS41P38959 992 aa2.71□□□□□ -1.98
SIN3YOL004W TAF4P50105 388 aa2.71□□□□□ -1.98
SIN3YOL004W SDT1P53078 280 aa2.71□□□□□ -1.98
SIN3YOL004W YKR011CQ02209 353 aa2.71□□□□□ -1.98
SIN3YOL004W CGI121Q03705 181 aaKnown RBP2.71□□□□□ -1.98
SIN3YOL004W TRS23Q03784 219 aa2.71□□□□□ -1.98
SIN3YOL004W PHO92Q06390 306 aa2.71□□□□□ -1.98
SIN3YOL004W SRL1Q08673 210 aa2.71□□□□□ -1.98
SIN3YOL004W GPB1Q08886 897 aa2.71□□□□□ -1.98
SIN3YOL004W YLR358CO13565 187 aa2.7□□□□□ -1.98
SIN3YOL004W ATP2P00830 511 aaKnown RBP2.7□□□□□ -1.98
SIN3YOL004W TYR1P20049 452 aa2.7□□□□□ -1.98
SIN3YOL004W VMA16P23968 213 aa2.7□□□□□ -1.98
SIN3YOL004W BMH2P34730 273 aaKnown RBP2.7□□□□□ -1.98
SIN3YOL004W LSM5P40089 93 aaKnown RBP2.7□□□□□ -1.98
SIN3YOL004W ECO1P43605 281 aa2.7□□□□□ -1.98
SIN3YOL004W COG1P53079 417 aa2.7□□□□□ -1.98
SIN3YOL004W RRP46P53256 223 aaPredicted RBP2.7□□□□□ -1.98
SIN3YOL004W REG1Q00816 1014 aa2.7□□□□□ -1.98
SIN3YOL004W RSM28Q03430 361 aa2.7□□□□□ -1.98
SIN3YOL004W PIN3Q06449 215 aa2.7□□□□□ -1.98
SIN3YOL004W YOR376WQ08900 122 aa2.7□□□□□ -1.98
SIN3YOL004W ARC19P33204 171 aaKnown RBP2.7□□□□□ -1.98
SIN3YOL004W PMT1P33775 817 aa2.7□□□□□ -1.98
SIN3YOL004W YBR139WP38109 508 aa2.7□□□□□ -1.98
SIN3YOL004W YJL193WP39542 402 aa2.7□□□□□ -1.98
SIN3YOL004W AIP1P46680 615 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms