RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W DIS3Q08162 1001 aaKnown RBP3.79□□□□□ -1.8
PUB1YNL016W HMI1Q12039 706 aa3.79□□□□□ -1.8
PUB1YNL016W NPC2Q12408 173 aa3.79□□□□□ -1.8
PUB1YNL016W AI5_ALPHAQ9ZZX1 630 aa3.79□□□□□ -1.8
PUB1YNL016W YPR089WO13585 888 aa3.78□□□□□ -1.8
PUB1YNL016W COX3P00420 269 aa3.78□□□□□ -1.8
PUB1YNL016W CDC6P09119 513 aa3.78□□□□□ -1.8
PUB1YNL016W PMR1P13586 950 aa3.78□□□□□ -1.8
PUB1YNL016W ALG1P16661 449 aa3.78□□□□□ -1.8
PUB1YNL016W MSB1P21339 1137 aaKnown RBP3.78□□□□□ -1.8
PUB1YNL016W AMD2P22580 549 aa3.78□□□□□ -1.8
PUB1YNL016W CDC20P26309 610 aa3.78□□□□□ -1.8
PUB1YNL016W PMI40P29952 429 aaKnown RBP3.78□□□□□ -1.8
PUB1YNL016W MSB2P32334 1306 aa3.78□□□□□ -1.8
PUB1YNL016W ARO4P32449 370 aaKnown RBP3.78□□□□□ -1.8
PUB1YNL016W BMH2P34730 273 aaKnown RBP3.78□□□□□ -1.8
PUB1YNL016W ECM4P36156 370 aa3.78□□□□□ -1.8
PUB1YNL016W CTP1P38152 299 aa3.78□□□□□ -1.8
PUB1YNL016W PCA1P38360 1216 aa3.78□□□□□ -1.8
PUB1YNL016W END3P39013 349 aa3.78□□□□□ -1.8
PUB1YNL016W SAP1P39955 897 aaKnown RBP3.78□□□□□ -1.8
PUB1YNL016W YER085CP40058 173 aa3.78□□□□□ -1.8
PUB1YNL016W ATG27P46989 271 aa3.78□□□□□ -1.8
PUB1YNL016W AIM22P47051 409 aa3.78□□□□□ -1.8
PUB1YNL016W BIO3P50277 480 aa3.78□□□□□ -1.8
PUB1YNL016W EFM5P53200 248 aaKnown RBP3.78□□□□□ -1.8
PUB1YNL016W ERG5P54781 538 aa3.78□□□□□ -1.8
PUB1YNL016W REX2P54964 269 aaKnown RBP3.78□□□□□ -1.8
PUB1YNL016W PET117Q02771 107 aa3.78□□□□□ -1.8
PUB1YNL016W SSY1Q03770 852 aa3.78□□□□□ -1.8
PUB1YNL016W AIM33Q04516 312 aa3.78□□□□□ -1.8
PUB1YNL016W APC4Q04601 652 aa3.78□□□□□ -1.8
PUB1YNL016W YML053CQ04978 212 aa3.78□□□□□ -1.8
PUB1YNL016W PKH2Q12236 1081 aaKnown RBP3.78□□□□□ -1.8
PUB1YNL016W LPX1Q12405 387 aaKnown RBP3.78□□□□□ -1.8
PUB1YNL016W MEX67Q99257 599 aaKnown RBP3.78□□□□□ -1.8
PUB1YNL016W AAC1P04710 309 aa3.77□□□□□ -1.81
PUB1YNL016W RIP1P08067 215 aa3.77□□□□□ -1.81
PUB1YNL016W KSS1P14681 368 aa3.77□□□□□ -1.81
PUB1YNL016W THR4P16120 514 aaKnown RBP3.77□□□□□ -1.81
PUB1YNL016W RIM1P32445 135 aaKnown RBP3.77□□□□□ -1.81
PUB1YNL016W SOF1P33750 489 aaKnown RBP3.77□□□□□ -1.81
PUB1YNL016W TRM2P33753 639 aa3.77□□□□□ -1.81
PUB1YNL016W YKL023WP36103 277 aaKnown RBP3.77□□□□□ -1.81
PUB1YNL016W RPF2P36160 344 aaKnown RBP3.77□□□□□ -1.81
PUB1YNL016W OLA1P38219 394 aaKnown RBP3.77□□□□□ -1.81
PUB1YNL016W RIX1P38883 763 aaPredicted RBP3.77□□□□□ -1.81
PUB1YNL016W HRB1P38922 454 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
PUB1YNL016W CIN4P39110 191 aa3.77□□□□□ -1.81
PUB1YNL016W RCY1P39531 840 aa3.77□□□□□ -1.81
PUB1YNL016W YER130CP39959 443 aa3.77□□□□□ -1.81
PUB1YNL016W ATM1P40416 690 aa3.77□□□□□ -1.81
PUB1YNL016W SHQ1P40486 507 aaPredicted RBP3.77□□□□□ -1.81
PUB1YNL016W OTU1P43558 301 aa3.77□□□□□ -1.81
PUB1YNL016W MRK1P50873 501 aa3.77□□□□□ -1.81
PUB1YNL016W YGL114WP53134 725 aa3.77□□□□□ -1.81
PUB1YNL016W YGL108CP53139 140 aa3.77□□□□□ -1.81
PUB1YNL016W VOA1P53262 265 aa3.77□□□□□ -1.81
PUB1YNL016W YGR126WP53274 230 aa3.77□□□□□ -1.81
PUB1YNL016W DSL1P53847 754 aa3.77□□□□□ -1.81
PUB1YNL016W STD1Q02794 444 aa3.77□□□□□ -1.81
PUB1YNL016W PLB2Q03674 706 aa3.77□□□□□ -1.81
PUB1YNL016W CAB5Q03941 241 aa3.77□□□□□ -1.81
PUB1YNL016W YPR078CQ06813 372 aa3.77□□□□□ -1.81
PUB1YNL016W POS5Q06892 414 aa3.77□□□□□ -1.81
PUB1YNL016W CYK3Q07533 885 aa3.77□□□□□ -1.81
PUB1YNL016W YDL242WQ07746 117 aa3.77□□□□□ -1.81
PUB1YNL016W NSE1Q07913 336 aa3.77□□□□□ -1.81
PUB1YNL016W YOL107WQ12239 342 aa3.77□□□□□ -1.81
PUB1YNL016W LCB4Q12246 624 aa3.77□□□□□ -1.81
PUB1YNL016W GIS3Q12418 502 aa3.77□□□□□ -1.81
PUB1YNL016W DCP1Q12517 231 aaPredicted RBP3.77□□□□□ -1.81
PUB1YNL016W Q0010Q9ZZX9 128 aa3.77□□□□□ -1.81
PUB1YNL016W ILV1P00927 576 aaKnown RBP3.76□□□□□ -1.81
PUB1YNL016W ARG4P04076 463 aaPredicted RBP3.76□□□□□ -1.81
PUB1YNL016W RPS14AP06367 137 aaKnown RBP3.76□□□□□ -1.81
PUB1YNL016W SIR3P06701 978 aa3.76□□□□□ -1.81
PUB1YNL016W RHO2P06781 192 aa3.76□□□□□ -1.81
PUB1YNL016W PEP5P12868 1029 aa3.76□□□□□ -1.81
PUB1YNL016W CDC23P16522 626 aa3.76□□□□□ -1.81
PUB1YNL016W GLN3P18494 730 aa3.76□□□□□ -1.81
PUB1YNL016W SGV1P23293 657 aaKnown RBP3.76□□□□□ -1.81
PUB1YNL016W RSA4P25382 515 aaKnown RBP3.76□□□□□ -1.81
PUB1YNL016W ADY2P25613 283 aa3.76□□□□□ -1.81
PUB1YNL016W LAC1P28496 418 aa3.76□□□□□ -1.81
PUB1YNL016W PSO2P30620 661 aa3.76□□□□□ -1.81
PUB1YNL016W SIP1P32578 815 aa3.76□□□□□ -1.81
PUB1YNL016W TMT1P32643 299 aa3.76□□□□□ -1.81
PUB1YNL016W PRS1P32895 427 aaKnown RBP3.76□□□□□ -1.81
PUB1YNL016W LHS1P36016 881 aa3.76□□□□□ -1.81
PUB1YNL016W YPT10P38146 199 aa3.76□□□□□ -1.81
PUB1YNL016W ICS2P38284 255 aa3.76□□□□□ -1.81
PUB1YNL016W YHR045WP38775 560 aa3.76□□□□□ -1.81
PUB1YNL016W YHR122WP38829 231 aa3.76□□□□□ -1.81
PUB1YNL016W GPI16P38875 610 aa3.76□□□□□ -1.81
PUB1YNL016W RPS14BP39516 138 aaKnown RBP3.76□□□□□ -1.81
PUB1YNL016W YHC3P47040 408 aa3.76□□□□□ -1.81
PUB1YNL016W LOH1P47055 219 aa3.76□□□□□ -1.81
PUB1YNL016W GTF1P53260 183 aaPredicted RBP3.76□□□□□ -1.81
PUB1YNL016W DIP5P53388 608 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms