RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C MSC1Q03104 513 aa2.53□□□□□ -2
YMR050CYMR050C YDR476CQ03362 224 aa2.53□□□□□ -2
YMR050CYMR050C RAD30Q04049 632 aa2.53□□□□□ -2
YMR050CYMR050C STE23Q06010 1027 aa2.53□□□□□ -2
YMR050CYMR050C NEJ1Q06148 342 aa2.53□□□□□ -2
YMR050CYMR050C YDL121CQ07541 149 aa2.53□□□□□ -2
YMR050CYMR050C YOL131WQ08270 108 aa2.53□□□□□ -2
YMR050CYMR050C SLD7Q08457 257 aa2.53□□□□□ -2
YMR050CYMR050C VPS54Q12071 889 aa2.53□□□□□ -2
YMR050CYMR050C HTA1P04911 132 aaKnown RBP2.53□□□□□ -2
YMR050CYMR050C HTA2P04912 132 aa2.53□□□□□ -2
YMR050CYMR050C PUT4P15380 627 aa2.53□□□□□ -2
YMR050CYMR050C BAS1P22035 811 aa2.53□□□□□ -2
YMR050CYMR050C DMC1P25453 334 aa2.53□□□□□ -2
YMR050CYMR050C URA7P28274 579 aaKnown RBP2.53□□□□□ -2
YMR050CYMR050C DAL3P32459 195 aa2.53□□□□□ -2
YMR050CYMR050C CDC5P32562 705 aa2.53□□□□□ -2
YMR050CYMR050C PHO11P35842 467 aa2.53□□□□□ -2
YMR050CYMR050C SHE2P36068 246 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
YMR050CYMR050C PHO12P38693 467 aa2.53□□□□□ -2
YMR050CYMR050C YHR020WP38708 688 aaKnown RBP2.53□□□□□ -2
YMR050CYMR050C YJR008WP47085 338 aa2.53□□□□□ -2
YMR050CYMR050C BOL2P53082 120 aa2.53□□□□□ -2
YMR050CYMR050C SDO1Q07953 250 aaKnown RBP2.53□□□□□ -2
YMR050CYMR050C YOL029CQ08187 201 aa2.53□□□□□ -2
YMR050CYMR050C VPS68Q12016 184 aa2.53□□□□□ -2
YMR050CYMR050C PNS1Q12412 539 aa2.53□□□□□ -2
YMR050CYMR050C YBL113CQ7M4S9 792 aa2.53□□□□□ -2
YMR050CYMR050C YBT1P32386 1661 aa2.53□□□□□ -2
YMR050CYMR050C KIN2P13186 1147 aaKnown RBP2.53□□□□□ -2.01
YMR050CYMR050C GRR1P24814 1151 aa2.53□□□□□ -2.01
YMR050CYMR050C YEF1P32622 495 aa2.53□□□□□ -2.01
YMR050CYMR050C SPC42P36094 363 aa2.53□□□□□ -2.01
YMR050CYMR050C END3P39013 349 aa2.53□□□□□ -2.01
YMR050CYMR050C GCD10P41814 478 aa2.53□□□□□ -2.01
YMR050CYMR050C UBP6P43593 499 aaKnown RBP2.53□□□□□ -2.01
YMR050CYMR050C CPR7P47103 393 aa2.53□□□□□ -2.01
YMR050CYMR050C YJR149WP47177 404 aa2.53□□□□□ -2.01
YMR050CYMR050C FAL1Q12099 399 aaKnown RBP2.53□□□□□ -2.01
YMR050CYMR050C YPL066WQ12194 479 aa2.53□□□□□ -2.01
YMR050CYMR050C AI5_ALPHAQ9ZZX1 630 aa2.53□□□□□ -2.01
YMR050CYMR050C RPL6BP05739 176 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C YMR085WP0CF18 432 aa2.52□□□□□ -2.01
YMR050CYMR050C GLK1P17709 500 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C RFA1P22336 621 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C PRP21P32524 280 aaPredicted RBP2.52□□□□□ -2.01
YMR050CYMR050C TIP20P33891 701 aa2.52□□□□□ -2.01
YMR050CYMR050C JEN1P36035 616 aa2.52□□□□□ -2.01
YMR050CYMR050C APL3P38065 1025 aa2.52□□□□□ -2.01
YMR050CYMR050C SCO2P38072 301 aa2.52□□□□□ -2.01
YMR050CYMR050C YHR127WP38833 243 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C TAT2P38967 592 aa2.52□□□□□ -2.01
YMR050CYMR050C PSA1P41940 361 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C YNL010WP53981 241 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C RPL22BP56628 122 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C MUK1Q02866 612 aa2.52□□□□□ -2.01
YMR050CYMR050C RRN5Q02983 363 aa2.52□□□□□ -2.01
YMR050CYMR050C YMR210WQ03649 449 aa2.52□□□□□ -2.01
YMR050CYMR050C TRM12Q04235 462 aa2.52□□□□□ -2.01
YMR050CYMR050C RQC1Q05468 723 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C YPR127WQ06494 345 aa2.52□□□□□ -2.01
YMR050CYMR050C ATG40Q99325 256 aa2.52□□□□□ -2.01
YMR050CYMR050C LEU1P07264 779 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C PDA1P16387 420 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C CPR3P25719 182 aa2.52□□□□□ -2.01
YMR050CYMR050C TMT1P32643 299 aa2.52□□□□□ -2.01
YMR050CYMR050C YME1P32795 747 aa2.52□□□□□ -2.01
YMR050CYMR050C NUP120P35729 1037 aa2.52□□□□□ -2.01
YMR050CYMR050C YKL071WP36086 256 aa2.52□□□□□ -2.01
YMR050CYMR050C RRT2P38332 387 aa2.52□□□□□ -2.01
YMR050CYMR050C BCD1P38772 366 aa2.52□□□□□ -2.01
YMR050CYMR050C LCP5P40079 357 aaPredicted RBP2.52□□□□□ -2.01
YMR050CYMR050C TMA108P40462 946 aa2.52□□□□□ -2.01
YMR050CYMR050C ESBP6P53918 673 aa2.52□□□□□ -2.01
YMR050CYMR050C YDR124WQ04608 324 aa2.52□□□□□ -2.01
YMR050CYMR050C HMG1P12683 1054 aa2.52□□□□□ -2.01
YMR050CYMR050C MCK1P21965 375 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C DSS4P32601 143 aa2.52□□□□□ -2.01
YMR050CYMR050C GPX1P36014 167 aa2.52□□□□□ -2.01
YMR050CYMR050C YBR284WP38150 797 aa2.52□□□□□ -2.01
YMR050CYMR050C TRR2P38816 342 aa2.52□□□□□ -2.01
YMR050CYMR050C UBA4P38820 440 aa2.52□□□□□ -2.01
YMR050CYMR050C HEM14P40012 539 aa2.52□□□□□ -2.01
YMR050CYMR050C ZIM17P42844 174 aa2.52□□□□□ -2.01
YMR050CYMR050C FAR7P43592 221 aa2.52□□□□□ -2.01
YMR050CYMR050C SHY1P53266 389 aa2.52□□□□□ -2.01
YMR050CYMR050C TEP1P53916 434 aa2.52□□□□□ -2.01
YMR050CYMR050C HER2Q03557 464 aa2.52□□□□□ -2.01
YMR050CYMR050C SYT1Q06836 1226 aa2.52□□□□□ -2.01
YMR050CYMR050C NBA1Q08229 501 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C HUA2Q12134 243 aa2.52□□□□□ -2.01
YMR050CYMR050C YDL180WQ12301 547 aa2.52□□□□□ -2.01
YMR050CYMR050C GAL4P04386 881 aa2.52□□□□□ -2.01
YMR050CYMR050C PEP4P07267 405 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C REV1P12689 985 aa2.52□□□□□ -2.01
YMR050CYMR050C FBA1P14540 359 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C SRV2P17555 526 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C GLN3P18494 730 aa2.52□□□□□ -2.01
YMR050CYMR050C FAR1P21268 830 aa2.52□□□□□ -2.01
YMR050CYMR050C MRPL8P22353 238 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms