RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C VMA16P23968 213 aa4.68□□□□□ -1.66
NUP116YMR047C BEM1P29366 551 aa4.68□□□□□ -1.66
NUP116YMR047C TFC1P32367 649 aa4.68□□□□□ -1.66
NUP116YMR047C PRS2P38620 318 aaKnown RBP4.68□□□□□ -1.66
NUP116YMR047C DHH1P39517 506 aaKnown RBP4.68□□□□□ -1.66
NUP116YMR047C ZIM17P42844 174 aa4.68□□□□□ -1.66
NUP116YMR047C YLR173WQ06247 608 aa4.68□□□□□ -1.66
NUP116YMR047C FRE5Q08908 694 aa4.68□□□□□ -1.66
NUP116YMR047C YOL107WQ12239 342 aa4.68□□□□□ -1.66
NUP116YMR047C PAA1Q12447 191 aaKnown RBP4.68□□□□□ -1.66
NUP116YMR047C SET6Q12529 373 aa4.68□□□□□ -1.66
NUP116YMR047C CAR2P07991 424 aaKnown RBP4.67□□□□□ -1.66
NUP116YMR047C HEM15P16622 393 aa4.67□□□□□ -1.66
NUP116YMR047C HXT2P23585 541 aa4.67□□□□□ -1.66
NUP116YMR047C SKT5P34226 696 aa4.67□□□□□ -1.66
NUP116YMR047C YHR112CP38716 378 aa4.67□□□□□ -1.66
NUP116YMR047C VMA7P39111 118 aa4.67□□□□□ -1.66
NUP116YMR047C LRO1P40345 661 aa4.67□□□□□ -1.66
NUP116YMR047C RFC2P40348 353 aa4.67□□□□□ -1.66
NUP116YMR047C CCT8P47079 568 aaKnown RBP4.67□□□□□ -1.66
NUP116YMR047C GPI17Q04080 534 aa4.67□□□□□ -1.66
NUP116YMR047C HFD1Q04458 532 aa4.67□□□□□ -1.66
NUP116YMR047C YDR278CQ05612 105 aa4.67□□□□□ -1.66
NUP116YMR047C VTA1Q06263 330 aa4.67□□□□□ -1.66
NUP116YMR047C RRT8Q08219 342 aa4.67□□□□□ -1.66
NUP116YMR047C VAM3Q12241 283 aa4.67□□□□□ -1.66
NUP116YMR047C RRP12Q12754 1228 aaKnown RBP4.67□□□□□ -1.66
NUP116YMR047C FUR4P05316 633 aaKnown RBP4.67□□□□□ -1.66
NUP116YMR047C GCY1P14065 312 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
NUP116YMR047C RBK1P25332 333 aa4.67□□□□□ -1.66
NUP116YMR047C SRB5P32585 307 aa4.67□□□□□ -1.66
NUP116YMR047C NTR2P36118 322 aaPredicted RBP4.67□□□□□ -1.66
NUP116YMR047C MRPL15P36523 253 aa4.67□□□□□ -1.66
NUP116YMR047C YBR238CP38330 731 aaKnown RBP4.67□□□□□ -1.66
NUP116YMR047C SPF1P39986 1215 aaKnown RBP4.67□□□□□ -1.66
NUP116YMR047C GIM4P40005 111 aaKnown RBP4.67□□□□□ -1.66
NUP116YMR047C ALG8P40351 577 aa4.67□□□□□ -1.66
NUP116YMR047C SWP82P43554 623 aa4.67□□□□□ -1.66
NUP116YMR047C ASK10P48361 1146 aa4.67□□□□□ -1.66
NUP116YMR047C TAF6P53040 516 aa4.67□□□□□ -1.66
NUP116YMR047C KXD1P53158 218 aa4.67□□□□□ -1.66
NUP116YMR047C DLT1Q04216 342 aa4.67□□□□□ -1.66
NUP116YMR047C EMI1Q04406 187 aa4.67□□□□□ -1.66
NUP116YMR047C BCH1Q05029 724 aa4.67□□□□□ -1.66
NUP116YMR047C BSC6Q08280 497 aa4.67□□□□□ -1.66
NUP116YMR047C NUR1Q12066 484 aa4.67□□□□□ -1.66
NUP116YMR047C SUL2Q12325 893 aa4.67□□□□□ -1.66
NUP116YMR047C RKM5Q12367 367 aa4.67□□□□□ -1.66
NUP116YMR047C URA3P03962 267 aa4.67□□□□□ -1.66
NUP116YMR047C GAL7P08431 366 aa4.67□□□□□ -1.66
NUP116YMR047C KAR4P25583 335 aa4.67□□□□□ -1.66
NUP116YMR047C HEK2P38199 381 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66 RIP-Chip
NUP116YMR047C FTH1P38310 465 aa4.67□□□□□ -1.66
NUP116YMR047C VHC1P38329 1120 aa4.67□□□□□ -1.66
NUP116YMR047C GGC1P38988 300 aa4.67□□□□□ -1.66
NUP116YMR047C HXT14P42833 540 aa4.67□□□□□ -1.66
NUP116YMR047C UTP6Q02354 440 aaKnown RBP4.67□□□□□ -1.66
NUP116YMR047C NHP10Q03435 203 aa4.67□□□□□ -1.66
NUP116YMR047C YDR239CQ03780 787 aa4.67□□□□□ -1.66
NUP116YMR047C SNA4Q07549 140 aa4.67□□□□□ -1.66
NUP116YMR047C ULA1Q12059 462 aa4.67□□□□□ -1.66
NUP116YMR047C FMP16Q12497 93 aa4.67□□□□□ -1.66
NUP116YMR047C TMA7Q3E764 64 aaKnown RBP4.67□□□□□ -1.66
NUP116YMR047C LDB16P25587 256 aa4.66□□□□□ -1.66
NUP116YMR047C URA7P28274 579 aaKnown RBP4.66□□□□□ -1.66
NUP116YMR047C HOG1P32485 435 aa4.66□□□□□ -1.66
NUP116YMR047C SSH1P38353 490 aaKnown RBP4.66□□□□□ -1.66
NUP116YMR047C GIC1P38785 314 aa4.66□□□□□ -1.66
NUP116YMR047C TPA1P40032 644 aaKnown RBP4.66□□□□□ -1.66
NUP116YMR047C CIN1P40987 1014 aa4.66□□□□□ -1.66
NUP116YMR047C ARL3Q02804 198 aa4.66□□□□□ -1.66
NUP116YMR047C TDA5Q06417 326 aaKnown RBP4.66□□□□□ -1.66
NUP116YMR047C REH1Q06709 432 aa4.66□□□□□ -1.66
NUP116YMR047C YDL114WQ07530 308 aa4.66□□□□□ -1.66
NUP116YMR047C BUD20Q08004 166 aaPredicted RBP4.66□□□□□ -1.66
NUP116YMR047C SKI7Q08491 747 aaPredicted RBP4.66□□□□□ -1.66
NUP116YMR047C YDR262WQ12331 272 aa4.66□□□□□ -1.66
NUP116YMR047C YAR066WP0CX18 203 aa4.66□□□□□ -1.66
NUP116YMR047C YHR214WP0CX19 203 aa4.66□□□□□ -1.66
NUP116YMR047C MATALPHA1P0CY06 175 aa4.66□□□□□ -1.66
NUP116YMR047C HMLALPHA1P0CY07 175 aa4.66□□□□□ -1.66
NUP116YMR047C GID7P25569 745 aa4.66□□□□□ -1.66
NUP116YMR047C MSN4P33749 630 aa4.66□□□□□ -1.66
NUP116YMR047C SCO2P38072 301 aa4.66□□□□□ -1.66
NUP116YMR047C YBR259WP38338 688 aa4.66□□□□□ -1.66
NUP116YMR047C PCL5P38794 229 aa4.66□□□□□ -1.66
NUP116YMR047C YPS6P40583 537 aa4.66□□□□□ -1.66
NUP116YMR047C PSA1P41940 361 aaKnown RBP4.66□□□□□ -1.66
NUP116YMR047C NBP35P52920 328 aa4.66□□□□□ -1.66
NUP116YMR047C MRPS17Q03246 237 aaPredicted RBP4.66□□□□□ -1.66
NUP116YMR047C PLM2Q04383 521 aa4.66□□□□□ -1.66
NUP116YMR047C SYT1Q06836 1226 aa4.66□□□□□ -1.66
NUP116YMR047C BRE4Q07660 1125 aa4.66□□□□□ -1.66
NUP116YMR047C NTO1Q12311 748 aa4.66□□□□□ -1.66
NUP116YMR047C ZRT2Q12436 422 aa4.66□□□□□ -1.66
NUP116YMR047C FRS1P15624 595 aaKnown RBP4.66□□□□□ -1.66
NUP116YMR047C GRX2P17695 143 aaKnown RBP4.66□□□□□ -1.66
NUP116YMR047C PET9P18239 318 aaKnown RBP4.66□□□□□ -1.66
NUP116YMR047C SNF5P18480 905 aa4.66□□□□□ -1.66
NUP116YMR047C IFM1P25038 676 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms