RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C NSP1P14907 823 aaKnown RBP4.48□□□□□ -1.69
CCS1YMR038C ROX1P25042 368 aa4.48□□□□□ -1.69
CCS1YMR038C YCL068CP25593 260 aa4.48□□□□□ -1.69
CCS1YMR038C ATP11P32453 318 aa4.48□□□□□ -1.69
CCS1YMR038C ORC2P32833 620 aa4.48□□□□□ -1.69
CCS1YMR038C CAB3P36076 571 aa4.48□□□□□ -1.69
CCS1YMR038C STB6P36085 766 aa4.48□□□□□ -1.69
CCS1YMR038C MRP21P38175 177 aa4.48□□□□□ -1.69
CCS1YMR038C UBA4P38820 440 aa4.48□□□□□ -1.69
CCS1YMR038C PHB1P40961 287 aa4.48□□□□□ -1.69
CCS1YMR038C PET117Q02771 107 aa4.48□□□□□ -1.69
CCS1YMR038C MDM30Q05930 598 aa4.48□□□□□ -1.69
CCS1YMR038C VTA1Q06263 330 aa4.48□□□□□ -1.69
CCS1YMR038C YDL242WQ07746 117 aa4.48□□□□□ -1.69
CCS1YMR038C YOR097CQ12274 175 aaPredicted RBP4.48□□□□□ -1.69
CCS1YMR038C YER175W-AQ8TGU4 54 aa4.48□□□□□ -1.69
CCS1YMR038C LAG2Q92325 660 aa4.48□□□□□ -1.69
CCS1YMR038C FAS1P07149 2051 aaKnown RBP4.48□□□□□ -1.69
CCS1YMR038C NAM9P27929 486 aa4.47□□□□□ -1.69
CCS1YMR038C EBP2P36049 427 aaKnown RBP4.47□□□□□ -1.69
CCS1YMR038C RPF2P36160 344 aaKnown RBP4.47□□□□□ -1.69
CCS1YMR038C MSG5P38590 489 aa4.47□□□□□ -1.69
CCS1YMR038C GPI16P38875 610 aa4.47□□□□□ -1.69
CCS1YMR038C GIM4P40005 111 aaKnown RBP4.47□□□□□ -1.69
CCS1YMR038C SCC4P40090 624 aa4.47□□□□□ -1.69
CCS1YMR038C UTP18P40362 594 aaPredicted RBP4.47□□□□□ -1.69
CCS1YMR038C DPH1P40487 425 aaKnown RBP4.47□□□□□ -1.69
CCS1YMR038C YFR020WP43600 232 aa4.47□□□□□ -1.69
CCS1YMR038C SAE2P46946 345 aa4.47□□□□□ -1.69
CCS1YMR038C UBX4P54730 416 aa4.47□□□□□ -1.69
CCS1YMR038C TDA9Q04545 1251 aa4.47□□□□□ -1.69
CCS1YMR038C BLS1Q06071 122 aa4.47□□□□□ -1.69
CCS1YMR038C CYK3Q07533 885 aa4.47□□□□□ -1.69
CCS1YMR038C YDL218WQ07629 317 aa4.47□□□□□ -1.69
CCS1YMR038C PRS5Q12265 496 aaKnown RBP4.47□□□□□ -1.69
CCS1YMR038C YLR111WQ12528 110 aa4.47□□□□□ -1.69
CCS1YMR038C HSH49Q99181 213 aaPredicted RBP4.47□□□□□ -1.69
CCS1YMR038C HOM3P10869 527 aa4.46□□□□□ -1.7
CCS1YMR038C HSP26P15992 214 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
CCS1YMR038C ADH7P25377 361 aa4.46□□□□□ -1.7
CCS1YMR038C ATG15P25641 520 aa4.46□□□□□ -1.7
CCS1YMR038C MGT1P26188 188 aa4.46□□□□□ -1.7
CCS1YMR038C SMI1P32566 505 aa4.46□□□□□ -1.7
CCS1YMR038C MGM101P32787 269 aaKnown RBP4.46□□□□□ -1.7
CCS1YMR038C MAK5P38112 773 aaPredicted RBP4.46□□□□□ -1.7
CCS1YMR038C YBR138CP38277 524 aa4.46□□□□□ -1.7
CCS1YMR038C LNP1P38878 278 aa4.46□□□□□ -1.7
CCS1YMR038C LAS21P40367 830 aa4.46□□□□□ -1.7
CCS1YMR038C CAB2P40506 365 aa4.46□□□□□ -1.7
CCS1YMR038C GAT1P43574 510 aa4.46□□□□□ -1.7
CCS1YMR038C RPC17P47076 161 aa4.46□□□□□ -1.7
CCS1YMR038C ERG26P53199 349 aaKnown RBP4.46□□□□□ -1.7
CCS1YMR038C COG2P53271 262 aa4.46□□□□□ -1.7
CCS1YMR038C MTG1Q03151 367 aaPredicted RBP4.46□□□□□ -1.7
CCS1YMR038C NUP53Q03790 475 aa4.46□□□□□ -1.7
CCS1YMR038C RIM13Q03792 727 aa4.46□□□□□ -1.7
CCS1YMR038C LEU9Q12166 604 aaKnown RBP4.46□□□□□ -1.7
CCS1YMR038C YOR012WQ12351 137 aa4.46□□□□□ -1.7
CCS1YMR038C GTT2Q12390 233 aa4.46□□□□□ -1.7
CCS1YMR038C PNO1Q99216 274 aaKnown RBP4.46□□□□□ -1.7
CCS1YMR038C IMA3P0CW40 589 aa4.45□□□□□ -1.7
CCS1YMR038C IMA4P0CW41 589 aa4.45□□□□□ -1.7
CCS1YMR038C PRP16P15938 1071 aaPredicted RBP4.45□□□□□ -1.7
CCS1YMR038C CKI1P20485 582 aa4.45□□□□□ -1.7
CCS1YMR038C NUP1P20676 1076 aa4.45□□□□□ -1.7
CCS1YMR038C PAP1P29468 568 aaKnown RBP4.45□□□□□ -1.7
CCS1YMR038C SFC1P33303 322 aa4.45□□□□□ -1.7
CCS1YMR038C RRP1P35178 278 aaPredicted RBP4.45□□□□□ -1.7
CCS1YMR038C YSW1P38280 609 aa4.45□□□□□ -1.7
CCS1YMR038C VHC1P38329 1120 aa4.45□□□□□ -1.7
CCS1YMR038C DHH1P39517 506 aaKnown RBP4.45□□□□□ -1.7
CCS1YMR038C SAP1P39955 897 aaKnown RBP4.45□□□□□ -1.7
CCS1YMR038C SER3P40054 469 aa4.45□□□□□ -1.7
CCS1YMR038C ALF1P53904 254 aa4.45□□□□□ -1.7
CCS1YMR038C TRM12Q04235 462 aa4.45□□□□□ -1.7
CCS1YMR038C GRS2Q06817 618 aa4.45□□□□□ -1.7
CCS1YMR038C IMA2Q08295 589 aa4.45□□□□□ -1.7
CCS1YMR038C YRA1Q12159 226 aaKnown RBP4.45□□□□□ -1.7
CCS1YMR038C PST1Q12355 444 aa4.45□□□□□ -1.7
CCS1YMR038C TEF1P02994 458 aaKnown RBP4.44□□□□□ -1.7
CCS1YMR038C GAL7P08431 366 aa4.44□□□□□ -1.7
CCS1YMR038C YAR066WP0CX18 203 aa4.44□□□□□ -1.7
CCS1YMR038C YHR214WP0CX19 203 aa4.44□□□□□ -1.7
CCS1YMR038C MDM10P18409 493 aa4.44□□□□□ -1.7
CCS1YMR038C FUR1P18562 216 aaKnown RBP4.44□□□□□ -1.7
CCS1YMR038C APN1P22936 367 aa4.44□□□□□ -1.7
CCS1YMR038C YCR102CP25608 368 aa4.44□□□□□ -1.7
CCS1YMR038C ARP2P32381 391 aaKnown RBP4.44□□□□□ -1.7
CCS1YMR038C SRB4P32569 687 aa4.44□□□□□ -1.7
CCS1YMR038C TIP20P33891 701 aa4.44□□□□□ -1.7
CCS1YMR038C PEX5P35056 612 aa4.44□□□□□ -1.7
CCS1YMR038C POP4P38336 279 aa4.44□□□□□ -1.7
CCS1YMR038C YHR045WP38775 560 aa4.44□□□□□ -1.7
CCS1YMR038C PUG1P40100 303 aa4.44□□□□□ -1.7
CCS1YMR038C YIL086CP40503 102 aa4.44□□□□□ -1.7
CCS1YMR038C IBA57P47158 497 aa4.44□□□□□ -1.7
CCS1YMR038C IMA1P53051 589 aa4.44□□□□□ -1.7
CCS1YMR038C PLM2Q04383 521 aa4.44□□□□□ -1.7
CCS1YMR038C YDR109CQ04585 715 aa4.44□□□□□ -1.7
CCS1YMR038C VAC14Q06708 880 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms