RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W CLB1P24868 471 aa1.89□□□□□ -2.11
VPS34YLR240W ECM15P35195 104 aa1.89□□□□□ -2.11
VPS34YLR240W DBP7P36120 742 aaKnown RBP1.89□□□□□ -2.11
VPS34YLR240W NDT80P38830 627 aa1.89□□□□□ -2.11
VPS34YLR240W YMR134WP40207 237 aa1.89□□□□□ -2.11
VPS34YLR240W SEC28P40509 296 aaKnown RBP1.89□□□□□ -2.11
VPS34YLR240W SNZ3P43545 298 aa1.89□□□□□ -2.11
VPS34YLR240W PTR3P43606 678 aa1.89□□□□□ -2.11
VPS34YLR240W HSH155P49955 971 aaKnown RBP1.89□□□□□ -2.11
VPS34YLR240W SMM1P53720 384 aaKnown RBP1.89□□□□□ -2.11
VPS34YLR240W SNZ2P53824 298 aa1.89□□□□□ -2.11
VPS34YLR240W SLD5Q03406 294 aa1.89□□□□□ -2.11
VPS34YLR240W YDR056CQ12025 205 aa1.89□□□□□ -2.11
VPS34YLR240W YMR230W-AQ3E7B5 62 aa1.89□□□□□ -2.11
VPS34YLR240W IMA3P0CW40 589 aa1.88□□□□□ -2.11
VPS34YLR240W IMA4P0CW41 589 aa1.88□□□□□ -2.11
VPS34YLR240W CLB3P24870 427 aa1.88□□□□□ -2.11
VPS34YLR240W SGF29P25554 259 aa1.88□□□□□ -2.11
VPS34YLR240W VPH1P32563 840 aaKnown RBP1.88□□□□□ -2.11
VPS34YLR240W MRP4P32902 394 aa1.88□□□□□ -2.11
VPS34YLR240W YBR144CP34215 104 aa1.88□□□□□ -2.11
VPS34YLR240W ICS2P38284 255 aa1.88□□□□□ -2.11
VPS34YLR240W MSR1P38714 643 aa1.88□□□□□ -2.11
VPS34YLR240W RIO2P40160 425 aaKnown RBP1.88□□□□□ -2.11
VPS34YLR240W YJL068CP40363 299 aa1.88□□□□□ -2.11
VPS34YLR240W LAM5P43560 674 aa1.88□□□□□ -2.11
VPS34YLR240W YML6P51998 286 aa1.88□□□□□ -2.11
VPS34YLR240W MNP1P53163 194 aaPredicted RBP1.88□□□□□ -2.11
VPS34YLR240W VPS72Q03388 795 aa1.88□□□□□ -2.11
VPS34YLR240W MZM1Q03429 123 aaPredicted RBP1.88□□□□□ -2.11
VPS34YLR240W YMR027WQ04371 470 aa1.88□□□□□ -2.11
VPS34YLR240W SPC24Q04477 213 aa1.88□□□□□ -2.11
VPS34YLR240W IMA2Q08295 589 aa1.88□□□□□ -2.11
VPS34YLR240W DNL4Q08387 944 aaPredicted RBP1.88□□□□□ -2.11
VPS34YLR240W HUA2Q12134 243 aa1.88□□□□□ -2.11
VPS34YLR240W YLL056CQ12177 298 aa1.88□□□□□ -2.11
VPS34YLR240W GPM3Q12326 303 aa1.88□□□□□ -2.11
VPS34YLR240W PAB1P04147 577 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
VPS34YLR240W RAD3P06839 778 aa1.88□□□□□ -2.11
VPS34YLR240W GPA2P10823 449 aa1.88□□□□□ -2.11
VPS34YLR240W AAC3P18238 307 aa1.88□□□□□ -2.11
VPS34YLR240W SAN1P22470 610 aa1.88□□□□□ -2.11
VPS34YLR240W PAP1P29468 568 aaKnown RBP1.88□□□□□ -2.11
VPS34YLR240W VPS17P32913 551 aa1.88□□□□□ -2.11
VPS34YLR240W RPL32P38061 130 aaKnown RBP1.88□□□□□ -2.11
VPS34YLR240W VID24P38263 362 aa1.88□□□□□ -2.11
VPS34YLR240W VHC1P38329 1120 aa1.88□□□□□ -2.11
VPS34YLR240W AFG3P39925 761 aa1.88□□□□□ -2.11
VPS34YLR240W YJL132WP47014 750 aa1.88□□□□□ -2.11
VPS34YLR240W ILM1P47155 203 aa1.88□□□□□ -2.11
VPS34YLR240W YJR154WP47181 346 aa1.88□□□□□ -2.11
VPS34YLR240W ALT2P52892 507 aa1.88□□□□□ -2.11
VPS34YLR240W TAF6P53040 516 aa1.88□□□□□ -2.11
VPS34YLR240W LCL3P53153 274 aa1.88□□□□□ -2.11
VPS34YLR240W SAM50P53969 484 aa1.88□□□□□ -2.11
VPS34YLR240W VPS9P54787 451 aa1.88□□□□□ -2.11
VPS34YLR240W RPM2Q02773 1202 aa1.88□□□□□ -2.11
VPS34YLR240W AIM32Q04689 311 aa1.88□□□□□ -2.11
VPS34YLR240W CMS1Q07897 291 aaKnown RBP1.88□□□□□ -2.11
VPS34YLR240W NCE102Q12207 173 aaRIP-Chip data1.88□□□□□ -2.11not detected
VPS34YLR240W ATG34Q12292 412 aa1.88□□□□□ -2.11
VPS34YLR240W PDH1Q12428 516 aaKnown RBP1.88□□□□□ -2.11
VPS34YLR240W AVL9Q12500 764 aa1.88□□□□□ -2.11
VPS34YLR240W RTP1Q12751 981 aa1.88□□□□□ -2.11
VPS34YLR240W UBR2Q07963 1872 aa1.88□□□□□ -2.11
VPS34YLR240W VPS3P23643 1011 aa1.87□□□□□ -2.11
VPS34YLR240W DAL2P25335 343 aa1.87□□□□□ -2.11
VPS34YLR240W EFB1P32471 206 aaKnown RBP1.87□□□□□ -2.11
VPS34YLR240W MSG5P38590 489 aa1.87□□□□□ -2.11
VPS34YLR240W YHR210CP38893 341 aa1.87□□□□□ -2.11
VPS34YLR240W DHH1P39517 506 aaKnown RBP1.87□□□□□ -2.11
VPS34YLR240W PRM9P39551 298 aa1.87□□□□□ -2.11
VPS34YLR240W ALD5P40047 520 aaKnown RBP1.87□□□□□ -2.11
VPS34YLR240W SCC4P40090 624 aa1.87□□□□□ -2.11
VPS34YLR240W YNL320WP42840 284 aa1.87□□□□□ -2.11
VPS34YLR240W YFL040WP43562 540 aa1.87□□□□□ -2.11
VPS34YLR240W SNG1P46950 547 aa1.87□□□□□ -2.11
VPS34YLR240W YGR126WP53274 230 aa1.87□□□□□ -2.11
VPS34YLR240W ARE2P53629 642 aaKnown RBP1.87□□□□□ -2.11
VPS34YLR240W DUG3P53871 357 aa1.87□□□□□ -2.11
VPS34YLR240W ALG11P53954 548 aaKnown RBP1.87□□□□□ -2.11
VPS34YLR240W ARO80Q04052 950 aa1.87□□□□□ -2.11
VPS34YLR240W YMR087WQ04299 284 aa1.87□□□□□ -2.11
VPS34YLR240W YMR321CQ04898 105 aa1.87□□□□□ -2.11
VPS34YLR240W YEH1Q07804 573 aa1.87□□□□□ -2.11
VPS34YLR240W AAD15Q08361 143 aa1.87□□□□□ -2.11
VPS34YLR240W ABP140Q08641 628 aaKnown RBP1.87□□□□□ -2.11
VPS34YLR240W YDR018CQ12185 396 aa1.87□□□□□ -2.11
VPS34YLR240W YBR298C-AQ8TGK4 73 aa1.87□□□□□ -2.11
VPS34YLR240W HAP2P06774 265 aa1.87□□□□□ -2.11
VPS34YLR240W SEC53P07283 254 aaKnown RBP1.87□□□□□ -2.11
VPS34YLR240W PDA1P16387 420 aaKnown RBP1.87□□□□□ -2.11
VPS34YLR240W HEM15P16622 393 aa1.87□□□□□ -2.11
VPS34YLR240W SRV2P17555 526 aaKnown RBP1.87□□□□□ -2.11
VPS34YLR240W SEC62P21825 274 aa1.87□□□□□ -2.11
VPS34YLR240W SLY1P22213 666 aa1.87□□□□□ -2.11
VPS34YLR240W SNT1P25357 1226 aa1.87□□□□□ -2.11
VPS34YLR240W TOA1P32773 286 aa1.87□□□□□ -2.11
VPS34YLR240W TIF3P34167 436 aaKnown RBP1.87□□□□□ -2.11
VPS34YLR240W COY1P34237 679 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms