RNA–Protein interactions for RNA: YLR056W

ERG3, Transcript of C-5 sterol desaturase, yeast

Gene ERG3, Length 1,098 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ERG3	YLR056W	ARE1	P25628	610 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	GCG1	P32656	232 aa	Known RBP	4.82	□□□□□ -1.64
ERG3	YLR056W	MFT1	P33441	392 aa	Known RBP	4.82	□□□□□ -1.64
ERG3	YLR056W	ASK1	P35734	292 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	SNU114	P36048	1008 aa	Known RBP	4.82	□□□□□ -1.64
ERG3	YLR056W	TUL1	P36096	758 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	AUR1	P36107	401 aa	Predicted RBP	4.82	□□□□□ -1.64
ERG3	YLR056W	BET3	P36149	193 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	RIX1	P38883	763 aa	Predicted RBP	4.82	□□□□□ -1.64
ERG3	YLR056W	CCT2	P39076	527 aa	Known RBP	4.82	□□□□□ -1.64
ERG3	YLR056W	YIL169C	P40442	995 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	YIL067C	P40514	678 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	YIL001W	P40560	513 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	APT1	P49435	187 aa	Known RBP	4.82	□□□□□ -1.64
ERG3	YLR056W	ATP22	P50273	684 aa	Predicted RBP	4.82	□□□□□ -1.64
ERG3	YLR056W	MON1	P53129	644 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	EFM5	P53200	248 aa	Known RBP	4.82	□□□□□ -1.64
ERG3	YLR056W	YGR053C	P53234	283 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	RMI1	Q02685	241 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	SML1	Q04964	104 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	RSA1	Q08932	381 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	AHA1	Q12449	350 aa	Known RBP	4.82	□□□□□ -1.64
ERG3	YLR056W	RRP36	Q12481	300 aa	Predicted RBP	4.82	□□□□□ -1.64
ERG3	YLR056W	KCS1	Q12494	1050 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	MTR10	Q99189	972 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	YOR019W	Q99248	730 aa		4.82	□□□□□ -1.64
ERG3	YLR056W	RPL20A	P0CX23	172 aa	Known RBP	4.81	□□□□□ -1.64
ERG3	YLR056W	RPL20B	P0CX24	172 aa	Predicted RBP	4.81	□□□□□ -1.64
ERG3	YLR056W	SLM5	P25345	492 aa	Known RBP	4.81	□□□□□ -1.64
ERG3	YLR056W	YCR090C	P25654	182 aa	Known RBP	4.81	□□□□□ -1.64
ERG3	YLR056W	UBC6	P33296	250 aa	Predicted RBP	4.81	□□□□□ -1.64
ERG3	YLR056W	LOT5	P34234	306 aa		4.81	□□□□□ -1.64
ERG3	YLR056W	RRP14	P36080	434 aa	Known RBP	4.81	□□□□□ -1.64
ERG3	YLR056W	YKR078W	P36158	585 aa	Known RBP	4.81	□□□□□ -1.64
ERG3	YLR056W	ETR1	P38071	380 aa		4.81	□□□□□ -1.64
ERG3	YLR056W	YGP1	P38616	354 aa	Known RBP	4.81	□□□□□ -1.64
ERG3	YLR056W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
ERG3	YLR056W	APS3	P47064	194 aa		4.81	□□□□□ -1.64
ERG3	YLR056W	MIX14	Q04341	121 aa		4.81	□□□□□ -1.64
ERG3	YLR056W	YLR446W	Q06204	433 aa		4.81	□□□□□ -1.64
ERG3	YLR056W	YPR172W	Q06608	200 aa		4.81	□□□□□ -1.64
ERG3	YLR056W	YET3	Q07451	203 aa		4.81	□□□□□ -1.64
ERG3	YLR056W	CHS5	Q12114	671 aa	Known RBP	4.81	□□□□□ -1.64
ERG3	YLR056W	YCL012C	Q8J0M4	134 aa		4.81	□□□□□ -1.64
ERG3	YLR056W	MDM12	Q92328	271 aa		4.81	□□□□□ -1.64
ERG3	YLR056W	RGS2	Q99188	309 aa		4.81	□□□□□ -1.64
ERG3	YLR056W	RPB2	P08518	1224 aa	Known RBP	4.8	□□□□□ -1.64
ERG3	YLR056W	ROX1	P25042	368 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	EMP70	P32802	667 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	RPS1A	P33442	255 aa	Known RBP	4.8	□□□□□ -1.64
ERG3	YLR056W	MSN2	P33748	704 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	VPS21	P36017	210 aa	Known RBP	4.8	□□□□□ -1.64
ERG3	YLR056W	TDP1	P38319	544 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	YMR262W	P38430	313 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	TRR2	P38816	342 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	AIM46	P38885	310 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	SSP120	P39931	234 aa	Known RBP	4.8	□□□□□ -1.64
ERG3	YLR056W	SOK1	P40317	901 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	NTA1	P40354	457 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	YIL165C	P40446	119 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	TED1	P40533	473 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	INA22	P40576	216 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	FKH2	P41813	862 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	GCD10	P41814	478 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	SHR5	P41912	237 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	PGU1	P47180	361 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	SAM37	P50110	327 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	ARI1	P53111	347 aa	Known RBP	4.8	□□□□□ -1.64
ERG3	YLR056W	MPA43	P53583	542 aa	Predicted RBP	4.8	□□□□□ -1.64
ERG3	YLR056W	YNL140C	P53910	189 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	YLR460C	P54007	376 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	YPL107W	Q02873	248 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	YPL109C	Q02981	657 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	ATP25	Q03153	612 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	PLB2	Q03674	706 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	GIS1	Q03833	894 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	VTI1	Q04338	217 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	BUD22	Q04347	519 aa	Known RBP	4.8	□□□□□ -1.64
ERG3	YLR056W	PLM2	Q04383	521 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	SWF1	Q04629	336 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	YPR091C	Q06833	770 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	YLL007C	Q07799	665 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	YOR365C	Q08844	703 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	YTM1	Q12024	460 aa	Predicted RBP	4.8	□□□□□ -1.64
ERG3	YLR056W	YLL054C	Q12244	843 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	TAD3	Q9URQ3	322 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	DYN1	P36022	4092 aa		4.8	□□□□□ -1.64
ERG3	YLR056W	MRP10	O75012	95 aa		4.79	□□□□□ -1.64
ERG3	YLR056W	ERD1	P16151	362 aa		4.79	□□□□□ -1.64
ERG3	YLR056W	RPI1	P23250	407 aa	Known RBP	4.79	□□□□□ -1.64
ERG3	YLR056W	COX13	P32799	129 aa		4.79	□□□□□ -1.64
ERG3	YLR056W	MNN2	P38069	597 aa		4.79	□□□□□ -1.64
ERG3	YLR056W	ALG14	P38242	237 aa		4.79	□□□□□ -1.64
ERG3	YLR056W	HSM3	P38348	480 aa		4.79	□□□□□ -1.64
ERG3	YLR056W	BZZ1	P38822	633 aa		4.79	□□□□□ -1.64
ERG3	YLR056W	YMR144W	P40214	342 aa	Known RBP	4.79	□□□□□ -1.64
ERG3	YLR056W	COA1	P40452	197 aa		4.79	□□□□□ -1.64
ERG3	YLR056W	UPF3	P48412	387 aa	Known RBP	4.79	□□□□□ -1.64
ERG3	YLR056W	YPT32	P51996	222 aa	Known RBP	4.79	□□□□□ -1.64
ERG3	YLR056W	PPT1	P53043	513 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms