RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W SPO19Q03029 223 aa2.39□□□□□ -2.03
SDC25YLL016W YMR178WQ03219 274 aaKnown RBP2.39□□□□□ -2.03
SDC25YLL016W NDL1Q06568 189 aa2.39□□□□□ -2.03
SDC25YLL016W ETT1Q08421 412 aaKnown RBP2.39□□□□□ -2.03
SDC25YLL016W BTS1Q12051 335 aa2.39□□□□□ -2.03
SDC25YLL016W YPR053CQ6Q5F3 151 aa2.39□□□□□ -2.03
SDC25YLL016W MOT1P32333 1867 aa2.39□□□□□ -2.03
SDC25YLL016W TOR2P32600 2474 aaKnown RBP2.39□□□□□ -2.03
SDC25YLL016W TRP3P00937 484 aa2.38□□□□□ -2.03
SDC25YLL016W PRB1P09232 635 aa2.38□□□□□ -2.03
SDC25YLL016W RPL40AP0CH08 128 aaKnown RBP2.38□□□□□ -2.03
SDC25YLL016W RPL40BP0CH09 128 aaKnown RBP2.38□□□□□ -2.03
SDC25YLL016W SEC62P21825 274 aa2.38□□□□□ -2.03
SDC25YLL016W SGV1P23293 657 aaKnown RBP2.38□□□□□ -2.03
SDC25YLL016W GEX1P25596 615 aa2.38□□□□□ -2.03
SDC25YLL016W YSC83P32792 385 aa2.38□□□□□ -2.03
SDC25YLL016W SHP1P34223 423 aa2.38□□□□□ -2.03
SDC25YLL016W BNA4P38169 460 aa2.38□□□□□ -2.03
SDC25YLL016W PEX32P38292 413 aa2.38□□□□□ -2.03
SDC25YLL016W EFM2P38347 419 aa2.38□□□□□ -2.03
SDC25YLL016W PCA1P38360 1216 aa2.38□□□□□ -2.03
SDC25YLL016W RRP4P38792 359 aaKnown RBP2.38□□□□□ -2.03
SDC25YLL016W GPI16P38875 610 aa2.38□□□□□ -2.03
SDC25YLL016W YHR210CP38893 341 aa2.38□□□□□ -2.03
SDC25YLL016W TAX4P47030 604 aa2.38□□□□□ -2.03
SDC25YLL016W BNA3P47039 444 aaKnown RBP2.38□□□□□ -2.03
SDC25YLL016W RIB4P50861 169 aaPredicted RBP2.38□□□□□ -2.03
SDC25YLL016W ZPR1P53303 486 aaKnown RBP2.38□□□□□ -2.03
SDC25YLL016W PDR8Q06149 701 aa2.38□□□□□ -2.03
SDC25YLL016W VAC14Q06708 880 aa2.38□□□□□ -2.03
SDC25YLL016W POS5Q06892 414 aa2.38□□□□□ -2.03
SDC25YLL016W LAS17Q12446 633 aa2.38□□□□□ -2.03
SDC25YLL016W SPO24Q3E752 67 aa2.38□□□□□ -2.03
SDC25YLL016W ATP10P18496 279 aa2.38□□□□□ -2.03
SDC25YLL016W HXT2P23585 541 aa2.38□□□□□ -2.03
SDC25YLL016W PSO2P30620 661 aa2.38□□□□□ -2.03
SDC25YLL016W LIP5P32875 414 aa2.38□□□□□ -2.03
SDC25YLL016W RPT5P33297 434 aaKnown RBP2.38□□□□□ -2.03
SDC25YLL016W BMH2P34730 273 aaKnown RBP2.38□□□□□ -2.03
SDC25YLL016W ROT2P38138 954 aa2.38□□□□□ -2.03
SDC25YLL016W DUG2P38149 878 aa2.38□□□□□ -2.03
SDC25YLL016W PHM8P40025 321 aa2.38□□□□□ -2.03
SDC25YLL016W ARG2P40360 574 aa2.38□□□□□ -2.03
SDC25YLL016W DBP6P53734 629 aaKnown RBP2.38□□□□□ -2.03
SDC25YLL016W ATG4P53867 494 aa2.38□□□□□ -2.03
SDC25YLL016W PET117Q02771 107 aa2.38□□□□□ -2.03
SDC25YLL016W MRP51Q02950 344 aa2.38□□□□□ -2.03
SDC25YLL016W MSC1Q03104 513 aa2.38□□□□□ -2.03
SDC25YLL016W ERV41Q04651 352 aa2.38□□□□□ -2.03
SDC25YLL016W ADE13Q05911 482 aaKnown RBP2.38□□□□□ -2.03
SDC25YLL016W RRG8Q06109 277 aa2.38□□□□□ -2.03
SDC25YLL016W ECM7Q06200 448 aa2.38□□□□□ -2.03
SDC25YLL016W MED7Q08278 222 aa2.38□□□□□ -2.03
SDC25YLL016W NRT1Q08485 598 aa2.38□□□□□ -2.03
SDC25YLL016W RPS10AQ08745 105 aaPredicted RBP2.38□□□□□ -2.03
SDC25YLL016W FRE7Q12333 620 aa2.38□□□□□ -2.03
SDC25YLL016W GIS3Q12418 502 aa2.38□□□□□ -2.03
SDC25YLL016W YDR524C-BQ3E6R4 66 aa2.38□□□□□ -2.03
SDC25YLL016W FKS1P38631 1876 aaKnown RBP2.38□□□□□ -2.03
SDC25YLL016W RPL24AP04449 155 aaKnown RBP2.37□□□□□ -2.03
SDC25YLL016W RIP1P08067 215 aa2.37□□□□□ -2.03
SDC25YLL016W YLL053CP0CD98 152 aa2.37□□□□□ -2.03
SDC25YLL016W THR4P16120 514 aaKnown RBP2.37□□□□□ -2.03
SDC25YLL016W TKL1P23254 680 aaKnown RBP2.37□□□□□ -2.03
SDC25YLL016W MSS51P32335 436 aa2.37□□□□□ -2.03
SDC25YLL016W CYS4P32582 507 aaKnown RBP2.37□□□□□ -2.03
SDC25YLL016W EMP70P32802 667 aa2.37□□□□□ -2.03
SDC25YLL016W SOR1P35497 357 aaKnown RBP2.37□□□□□ -2.03
SDC25YLL016W GMH1P36125 273 aa2.37□□□□□ -2.03
SDC25YLL016W QDR3P38227 689 aa2.37□□□□□ -2.03
SDC25YLL016W YHR045WP38775 560 aa2.37□□□□□ -2.03
SDC25YLL016W PRP39P39682 629 aaKnown RBP2.37□□□□□ -2.03
SDC25YLL016W ATM1P40416 690 aa2.37□□□□□ -2.03
SDC25YLL016W KTR5P53966 522 aaPredicted RBP2.37□□□□□ -2.03
SDC25YLL016W STE23Q06010 1027 aa2.37□□□□□ -2.03
SDC25YLL016W SOR2Q07786 357 aa2.37□□□□□ -2.03
SDC25YLL016W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SDC25YLL016W DCP1Q12517 231 aaPredicted RBP2.37□□□□□ -2.03
SDC25YLL016W BRR1Q99177 341 aaPredicted RBP2.37□□□□□ -2.03
SDC25YLL016W GAL4P04386 881 aa2.37□□□□□ -2.03
SDC25YLL016W GAS1P22146 559 aaKnown RBP2.37□□□□□ -2.03
SDC25YLL016W MGR1P25573 417 aa2.37□□□□□ -2.03
SDC25YLL016W YPS1P32329 569 aa2.37□□□□□ -2.03
SDC25YLL016W RAD23P32628 398 aaKnown RBP2.37□□□□□ -2.03
SDC25YLL016W RPC34P32910 317 aa2.37□□□□□ -2.03
SDC25YLL016W LST4P34239 828 aa2.37□□□□□ -2.03
SDC25YLL016W YKL071WP36086 256 aa2.37□□□□□ -2.03
SDC25YLL016W RTC2P38279 296 aa2.37□□□□□ -2.03
SDC25YLL016W YER079WP40052 210 aaKnown RBP2.37□□□□□ -2.03
SDC25YLL016W PAC11P40960 533 aa2.37□□□□□ -2.03
SDC25YLL016W BNA6P43619 295 aa2.37□□□□□ -2.03
SDC25YLL016W TOS3P43637 560 aa2.37□□□□□ -2.03
SDC25YLL016W RTT102P53330 157 aa2.37□□□□□ -2.03
SDC25YLL016W BUR2Q05949 395 aa2.37□□□□□ -2.03
SDC25YLL016W GPN3Q06543 272 aa2.37□□□□□ -2.03
SDC25YLL016W MYO1P08964 1928 aa2.37□□□□□ -2.03
SDC25YLL016W SCEIP03882 235 aa2.37□□□□□ -2.03
SDC25YLL016W ERG4P25340 473 aa2.37□□□□□ -2.03
SDC25YLL016W SLM5P25345 492 aaKnown RBP2.37□□□□□ -2.03
SDC25YLL016W CSM1P25651 190 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms