RNA–Protein interactions for RNA: YKR037C

SPC34, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC34, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC34	YKR037C	SMF3	Q12078	473 aa	Predicted RBP	4.83	□□□□□ -1.64
SPC34	YKR037C	AEP3	Q12089	606 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	HSP42	Q12329	375 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	FRE6	Q12473	712 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	RPL42A	P0CX27	106 aa	Known RBP	4.82	□□□□□ -1.64
SPC34	YKR037C	RPL42B	P0CX28	106 aa	Known RBP	4.82	□□□□□ -1.64
SPC34	YKR037C	SPO7	P18410	259 aa		4.82	□□□□□ -1.64
SPC34	YKR037C	YCL042W	P25572	119 aa		4.82	□□□□□ -1.64
SPC34	YKR037C	FUN19	P28003	413 aa	Predicted RBP	4.82	□□□□□ -1.64
SPC34	YKR037C	BEM1	P29366	551 aa		4.82	□□□□□ -1.64
SPC34	YKR037C	ANP1	P32629	500 aa		4.82	□□□□□ -1.64
SPC34	YKR037C	CUE2	P36075	443 aa	Known RBP	4.82	□□□□□ -1.64
SPC34	YKR037C	PSA1	P41940	361 aa	Known RBP	4.82	□□□□□ -1.64
SPC34	YKR037C	YJL132W	P47014	750 aa		4.82	□□□□□ -1.64
SPC34	YKR037C	BTN2	P53286	410 aa		4.82	□□□□□ -1.64
SPC34	YKR037C	YNL181W	P53878	407 aa		4.82	□□□□□ -1.64
SPC34	YKR037C	YDR286C	Q05530	114 aa		4.82	□□□□□ -1.64
SPC34	YKR037C	DCS1	Q06151	350 aa		4.82	□□□□□ -1.64
SPC34	YKR037C	YLR456W	Q06199	204 aa		4.82	□□□□□ -1.64
SPC34	YKR037C	ATX2	Q12067	313 aa		4.82	□□□□□ -1.64
SPC34	YKR037C	YNL162W-A	Q3E7A8	72 aa		4.82	□□□□□ -1.64
SPC34	YKR037C	SUC2	P00724	532 aa		4.81	□□□□□ -1.64
SPC34	YKR037C	RPL1A	P0CX43	217 aa	Known RBP	4.81	□□□□□ -1.64
SPC34	YKR037C	RPL1B	P0CX44	217 aa	Known RBP	4.81	□□□□□ -1.64
SPC34	YKR037C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
SPC34	YKR037C	HEL1	P36113	551 aa		4.81	□□□□□ -1.64
SPC34	YKR037C	YMR124W	P39523	943 aa	Known RBP	4.81	□□□□□ -1.64
SPC34	YKR037C	SYG1	P40528	902 aa		4.81	□□□□□ -1.64
SPC34	YKR037C	RTS2	P40962	232 aa		4.81	□□□□□ -1.64
SPC34	YKR037C	IAH1	P41734	238 aa		4.81	□□□□□ -1.64
SPC34	YKR037C	FET5	P43561	622 aa		4.81	□□□□□ -1.64
SPC34	YKR037C	EOS1	P53938	366 aa		4.81	□□□□□ -1.64
SPC34	YKR037C	COQ11	Q05892	277 aa		4.81	□□□□□ -1.64
SPC34	YKR037C	PHO92	Q06390	306 aa		4.81	□□□□□ -1.64
SPC34	YKR037C	NFI1	Q12216	726 aa		4.81	□□□□□ -1.64
SPC34	YKR037C	NDJ1	Q12366	352 aa		4.81	□□□□□ -1.64
SPC34	YKR037C	ADE4	P04046	510 aa	Known RBP	4.8	□□□□□ -1.64
SPC34	YKR037C	YER190C-B	P0CX94	160 aa		4.8	□□□□□ -1.64
SPC34	YKR037C	YEL077W-A	P0CX95	160 aa		4.8	□□□□□ -1.64
SPC34	YKR037C	YGR296C-B	P0CX96	160 aa		4.8	□□□□□ -1.64
SPC34	YKR037C	YPL283W-B	P0CX97	160 aa		4.8	□□□□□ -1.64
SPC34	YKR037C	YPR204C-A	P0CX98	160 aa		4.8	□□□□□ -1.64
SPC34	YKR037C	RPN2	P32565	945 aa	Known RBP	4.8	□□□□□ -1.64
SPC34	YKR037C	REC114	P32841	428 aa		4.8	□□□□□ -1.64
SPC34	YKR037C	CBP4	P37267	147 aa		4.8	□□□□□ -1.64
SPC34	YKR037C	BAT1	P38891	393 aa	Known RBP	4.8	□□□□□ -1.64
SPC34	YKR037C	TFG2	P41896	400 aa	Predicted RBP	4.8	□□□□□ -1.64
SPC34	YKR037C	NRM1	P53718	249 aa		4.8	□□□□□ -1.64
SPC34	YKR037C	SMA1	Q02651	245 aa		4.8	□□□□□ -1.64
SPC34	YKR037C	IVY1	Q04934	453 aa		4.8	□□□□□ -1.64
SPC34	YKR037C	APL5	Q08951	932 aa	Known RBP	4.8	□□□□□ -1.64
SPC34	YKR037C	MED2	Q12124	431 aa		4.8	□□□□□ -1.64
SPC34	YKR037C	RHB1	P25378	209 aa		4.79	□□□□□ -1.64
SPC34	YKR037C	GYP6	P32806	458 aa		4.79	□□□□□ -1.64
SPC34	YKR037C	ECM27	P47144	725 aa		4.79	□□□□□ -1.64
SPC34	YKR037C	ESBP6	P53918	673 aa		4.79	□□□□□ -1.64
SPC34	YKR037C	OCA2	P53949	197 aa		4.79	□□□□□ -1.64
SPC34	YKR037C	RPL15B	P54780	204 aa	Predicted RBP	4.79	□□□□□ -1.64
SPC34	YKR037C	ADA2	Q02336	434 aa		4.79	□□□□□ -1.64
SPC34	YKR037C	YPL107W	Q02873	248 aa		4.79	□□□□□ -1.64
SPC34	YKR037C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
SPC34	YKR037C	PGC1	Q08959	321 aa		4.79	□□□□□ -1.64
SPC34	YKR037C	BSC1	Q12140	328 aa		4.79	□□□□□ -1.64
SPC34	YKR037C	ARP6	Q12509	438 aa		4.79	□□□□□ -1.64
SPC34	YKR037C	MTR10	Q99189	972 aa		4.79	□□□□□ -1.64
SPC34	YKR037C	GLK1	P17709	500 aa	Known RBP	4.78	□□□□□ -1.64
SPC34	YKR037C	COQ1	P18900	473 aa		4.78	□□□□□ -1.64
SPC34	YKR037C	AIM17	P23180	465 aa	Known RBP	4.78	□□□□□ -1.64
SPC34	YKR037C	PRP21	P32524	280 aa	Predicted RBP	4.78	□□□□□ -1.64
SPC34	YKR037C	SWH1	P35845	1188 aa		4.78	□□□□□ -1.64
SPC34	YKR037C	ZTA1	P38230	334 aa	Known RBP	4.78	□□□□□ -1.64
SPC34	YKR037C	ATF1	P40353	525 aa		4.78	□□□□□ -1.64
SPC34	YKR037C	GPI1	P53306	609 aa		4.78	□□□□□ -1.64
SPC34	YKR037C	RHO5	P53879	331 aa	Known RBP	4.78	□□□□□ -1.64
SPC34	YKR037C	NCS2	P53923	493 aa	Predicted RBP	4.78	□□□□□ -1.64
SPC34	YKR037C	SAM50	P53969	484 aa		4.78	□□□□□ -1.64
SPC34	YKR037C	MSS11	Q03825	758 aa		4.78	□□□□□ -1.64
SPC34	YKR037C	CUE5	Q08412	411 aa	Known RBP	4.78	□□□□□ -1.64
SPC34	YKR037C	NRT1	Q08485	598 aa		4.78	□□□□□ -1.64
SPC34	YKR037C	LEU4	P06208	619 aa	Known RBP	4.77	□□□□□ -1.65
SPC34	YKR037C	TPM1	P17536	199 aa	Known RBP	4.77	□□□□□ -1.65
SPC34	YKR037C	MDM10	P18409	493 aa		4.77	□□□□□ -1.65
SPC34	YKR037C	GLN3	P18494	730 aa		4.77	□□□□□ -1.65
SPC34	YKR037C	FPR1	P20081	114 aa	Known RBP	4.77	□□□□□ -1.65
SPC34	YKR037C	MGR1	P25573	417 aa		4.77	□□□□□ -1.65
SPC34	YKR037C	SIN4	P32259	974 aa		4.77	□□□□□ -1.65
SPC34	YKR037C	LAS1	P36146	502 aa	Predicted RBP	4.77	□□□□□ -1.65
SPC34	YKR037C	FAD1	P38913	306 aa		4.77	□□□□□ -1.65
SPC34	YKR037C	VHS2	P40463	436 aa		4.77	□□□□□ -1.65
SPC34	YKR037C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
SPC34	YKR037C	HSP31	Q04432	237 aa		4.77	□□□□□ -1.65
SPC34	YKR037C	SKS1	Q12505	502 aa		4.77	□□□□□ -1.65
SPC34	YKR037C	YML002W	P0CF17	737 aa		4.76	□□□□□ -1.65
SPC34	YKR037C	ARO3	P14843	370 aa	Known RBP	4.76	□□□□□ -1.65
SPC34	YKR037C	YCR007C	P25354	239 aa		4.76	□□□□□ -1.65
SPC34	YKR037C	KRR1	P25586	316 aa	Predicted RBP	4.76	□□□□□ -1.65
SPC34	YKR037C	ACH1	P32316	526 aa		4.76	□□□□□ -1.65
SPC34	YKR037C	VPS17	P32913	551 aa		4.76	□□□□□ -1.65
SPC34	YKR037C	OSH3	P38713	996 aa	Known RBP	4.76	□□□□□ -1.65
SPC34	YKR037C	GND1	P38720	489 aa	Known RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms