RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	ASF2	P32448	525 aa	Predicted RBP	3.67	□□□□□ -1.82
LOS1	YKL205W	PRP19	P32523	503 aa	Known RBP	3.67	□□□□□ -1.82
LOS1	YKL205W	SUI1	P32911	108 aa	Known RBP	3.67	□□□□□ -1.82
LOS1	YKL205W	ASK1	P35734	292 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	TCD2	P36101	447 aa	Known RBP	3.67	□□□□□ -1.82
LOS1	YKL205W	MED6	P38782	295 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	ATG7	P38862	630 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	RBG1	P39729	369 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	YER184C	P39961	794 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	YGR201C	P42936	225 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	IDS2	P46958	469 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	RIM21	P48565	533 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	NRM1	P53718	249 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	SED5	Q01590	340 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	YOL024W	Q08172	172 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	YOR289W	Q12012	251 aa	Predicted RBP	3.67	□□□□□ -1.82
LOS1	YKL205W	RUP1	Q12242	671 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	YDR262W	Q12331	272 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	MHF2	Q3E829	80 aa		3.67	□□□□□ -1.82
LOS1	YKL205W	TRP3	P00937	484 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	DGR2	P32330	852 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	PET127	P32606	800 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	MSN4	P33749	630 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	YBL029W	P38201	376 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	INM1	P38710	295 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	TIF34	P40217	347 aa	Known RBP	3.66	□□□□□ -1.82
LOS1	YKL205W	IRC7	P43623	340 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	ALB1	P47019	175 aa	Predicted RBP	3.66	□□□□□ -1.82
LOS1	YKL205W	SDT1	P53078	280 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	DAM1	P53267	343 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	ASA1	Q06822	443 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	YLL007C	Q07799	665 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	TFB4	Q12004	338 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	PIN2	Q12057	282 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	TSC13	Q99190	310 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	SEC12	P11655	471 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	TRM1	P15565	570 aa	Known RBP	3.66	□□□□□ -1.82
LOS1	YKL205W	NAR1	P23503	491 aa	Known RBP	3.66	□□□□□ -1.82
LOS1	YKL205W	RVS161	P25343	265 aa	Known RBP	3.66	□□□□□ -1.82
LOS1	YKL205W	BUD14	P27637	709 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	PTP2	P29461	750 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	ZIP1	P31111	875 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	ATO2	P32907	282 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	EAP1	P36041	632 aa	Known RBP	3.66	□□□□□ -1.82
LOS1	YKL205W	CAB3	P36076	571 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	VMA10	P48836	114 aa	Known RBP	3.66	□□□□□ -1.82
LOS1	YKL205W	PCP1	P53259	346 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	SPO19	Q03029	223 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	SWF1	Q04629	336 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	SPO77	Q06134	477 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	CRN1	Q06440	651 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	YFT2	Q06676	274 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	YPR091C	Q06833	770 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	RRP40	Q08285	240 aa	Known RBP	3.66	□□□□□ -1.82
LOS1	YKL205W	GUP2	Q08929	609 aa		3.66	□□□□□ -1.82
LOS1	YKL205W	RPL40A	P0CH08	128 aa	Known RBP	3.65	□□□□□ -1.82
LOS1	YKL205W	RPL40B	P0CH09	128 aa	Known RBP	3.65	□□□□□ -1.82
LOS1	YKL205W	TYR1	P20049	452 aa		3.65	□□□□□ -1.82
LOS1	YKL205W	CCA1	P21269	546 aa		3.65	□□□□□ -1.82
LOS1	YKL205W	YIM1	P28625	365 aa		3.65	□□□□□ -1.82
LOS1	YKL205W	PTC1	P35182	281 aa		3.65	□□□□□ -1.82
LOS1	YKL205W	MTW1	P39731	289 aa		3.65	□□□□□ -1.82
LOS1	YKL205W	PAC10	P48363	199 aa		3.65	□□□□□ -1.82
LOS1	YKL205W	BIO3	P50277	480 aa		3.65	□□□□□ -1.82
LOS1	YKL205W	ROG1	P53118	685 aa		3.65	□□□□□ -1.82
LOS1	YKL205W	YGR266W	P53326	701 aa		3.65	□□□□□ -1.82
LOS1	YKL205W	YNL140C	P53910	189 aa		3.65	□□□□□ -1.82
LOS1	YKL205W	DIA2	Q08496	732 aa	Predicted RBP	3.65	□□□□□ -1.82
LOS1	YKL205W	YOR342C	Q12182	319 aa		3.65	□□□□□ -1.82
LOS1	YKL205W	SUI3	P09064	285 aa	Known RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	TAL1	P15019	335 aa	Known RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	HIS7	P33734	552 aa	Known RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	OMA1	P36163	345 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	PLB1	P39105	664 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	TWF1	P53250	332 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	MPP6	P53725	186 aa	Predicted RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	SNO2	P53823	222 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	APM1	Q00776	475 aa	Predicted RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	NOG1	Q02892	647 aa	Known RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	TAF12	Q03761	539 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	ARX1	Q03862	593 aa	Known RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	YPR127W	Q06494	345 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	BDS1	Q08347	646 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	YTM1	Q12024	460 aa	Predicted RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	YDL199C	Q12407	687 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	DET1	Q99288	334 aa	Known RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	COX9	P07255	59 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	SEC2	P17065	759 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	NPR1	P22211	790 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	IMG1	P25626	169 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	VMA6	P32366	345 aa	Known RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	HOG1	P32485	435 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	MDJ1	P35191	511 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	VPS21	P36017	210 aa	Known RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	GLG1	P36143	616 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	YBR139W	P38109	508 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	TRR2	P38816	342 aa		3.65	□□□□□ -1.83
LOS1	YKL205W	SAP1	P39955	897 aa	Known RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	TPA1	P40032	644 aa	Known RBP	3.65	□□□□□ -1.83
LOS1	YKL205W	RGI1	P40043	161 aa	Predicted RBP	3.65	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms