RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeastyeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCE1YKL011C IMA2Q08295 589 aa3.19□□□□□ -1.9
CCE1YKL011C SNX3Q08826 162 aaKnown RBP3.19□□□□□ -1.9
CCE1YKL011C YLR108CQ12259 485 aa3.19□□□□□ -1.9
CCE1YKL011C ATG34Q12292 412 aa3.19□□□□□ -1.9
CCE1YKL011C PDE2P06776 526 aa3.18□□□□□ -1.9
CCE1YKL011C RPL1AP0CX43 217 aaKnown RBP3.18□□□□□ -1.9
CCE1YKL011C RPL1BP0CX44 217 aaKnown RBP3.18□□□□□ -1.9
CCE1YKL011C CPR4P25334 318 aa3.18□□□□□ -1.9
CCE1YKL011C OLA1P38219 394 aaKnown RBP3.18□□□□□ -1.9
CCE1YKL011C YBR137WP38276 179 aa3.18□□□□□ -1.9
CCE1YKL011C MTC6P38849 526 aa3.18□□□□□ -1.9
CCE1YKL011C PCF11P39081 626 aaPredicted RBP3.18□□□□□ -1.9
CCE1YKL011C YPS6P40583 537 aa3.18□□□□□ -1.9
CCE1YKL011C NCA3P46955 337 aa3.18□□□□□ -1.9
CCE1YKL011C AZR1P50080 613 aa3.18□□□□□ -1.9
CCE1YKL011C PIB2P53191 635 aa3.18□□□□□ -1.9
CCE1YKL011C YDR341CQ05506 607 aaKnown RBP3.18□□□□□ -1.9
CCE1YKL011C ESA1Q08649 445 aa3.18□□□□□ -1.9
CCE1YKL011C SRL2Q12020 392 aa3.18□□□□□ -1.9
CCE1YKL011C ALG1P16661 449 aa3.17□□□□□ -1.9
CCE1YKL011C RRP7P25368 297 aaPredicted RBP3.17□□□□□ -1.9
CCE1YKL011C CYS4P32582 507 aaKnown RBP3.17□□□□□ -1.9
CCE1YKL011C YBR056WP38081 501 aa3.17□□□□□ -1.9
CCE1YKL011C STN1P38960 494 aa3.17□□□□□ -1.9
CCE1YKL011C YER079WP40052 210 aaKnown RBP3.17□□□□□ -1.9
CCE1YKL011C SEC28P40509 296 aaKnown RBP3.17□□□□□ -1.9
CCE1YKL011C WWM1P43582 211 aaKnown RBP3.17□□□□□ -1.9
CCE1YKL011C RHO5P53879 331 aaKnown RBP3.17□□□□□ -1.9
CCE1YKL011C RCF1Q03713 159 aa3.17□□□□□ -1.9
CCE1YKL011C RRN11Q04712 507 aa3.17□□□□□ -1.9
CCE1YKL011C CBS2P14905 389 aa3.16□□□□□ -1.9
CCE1YKL011C HSP104P31539 908 aaKnown RBP3.16□□□□□ -1.9
CCE1YKL011C MUD1P32605 298 aaKnown RBP3.16□□□□□ -1.9
CCE1YKL011C GPI16P38875 610 aa3.16□□□□□ -1.9
CCE1YKL011C PRM5P40476 318 aa3.16□□□□□ -1.9
CCE1YKL011C MMT1Q03218 510 aa3.16□□□□□ -1.9
CCE1YKL011C PBA1Q05778 276 aa3.16□□□□□ -1.9
CCE1YKL011C RRP9Q06506 573 aaKnown RBP3.16□□□□□ -1.9
CCE1YKL011C TSR1Q07381 788 aaKnown RBP3.16□□□□□ -1.9
CCE1YKL011C YOR387CQ08910 206 aa3.16□□□□□ -1.9
CCE1YKL011C RUP1Q12242 671 aa3.16□□□□□ -1.9
CCE1YKL011C HSP82P02829 709 aaKnown RBP3.15□□□□□ -1.91
CCE1YKL011C CDC21P06785 304 aa3.15□□□□□ -1.91
CCE1YKL011C DST1P07273 309 aa3.15□□□□□ -1.91
CCE1YKL011C YBL059WP34224 193 aa3.15□□□□□ -1.91
CCE1YKL011C AVT5P38176 459 aa3.15□□□□□ -1.91
CCE1YKL011C RXT2P38255 430 aa3.15□□□□□ -1.91
CCE1YKL011C STP2P38704 541 aa3.15□□□□□ -1.91
CCE1YKL011C NDT80P38830 627 aa3.15□□□□□ -1.91
CCE1YKL011C CHS6P40955 746 aa3.15□□□□□ -1.91
CCE1YKL011C BRO1P48582 844 aa3.15□□□□□ -1.91
CCE1YKL011C TOF1P53840 1238 aa3.15□□□□□ -1.91
CCE1YKL011C STD1Q02794 444 aa3.15□□□□□ -1.91
CCE1YKL011C ELP3Q02908 557 aaKnown RBP3.15□□□□□ -1.91
CCE1YKL011C PEX25Q02969 394 aa3.15□□□□□ -1.91
CCE1YKL011C BCH1Q05029 724 aa3.15□□□□□ -1.91
CCE1YKL011C RSA1Q08932 381 aa3.15□□□□□ -1.91
CCE1YKL011C ERV2Q12284 196 aa3.15□□□□□ -1.91
CCE1YKL011C SPT15P13393 240 aaKnown RBP3.14□□□□□ -1.91
CCE1YKL011C DEG1P31115 442 aaKnown RBP3.14□□□□□ -1.91
CCE1YKL011C SDH3P33421 198 aa3.14□□□□□ -1.91
CCE1YKL011C BLI1P35727 113 aa3.14□□□□□ -1.91
CCE1YKL011C RFS1P38234 210 aaKnown RBP3.14□□□□□ -1.91
CCE1YKL011C PFF1P38244 976 aa3.14□□□□□ -1.91
CCE1YKL011C INM1P38710 295 aa3.14□□□□□ -1.91
CCE1YKL011C SFH5P47008 294 aa3.14□□□□□ -1.91
CCE1YKL011C ROG1P53118 685 aa3.14□□□□□ -1.91
CCE1YKL011C TLG2Q08144 397 aa3.14□□□□□ -1.91
CCE1YKL011C TPT1Q12272 230 aaKnown RBP3.14□□□□□ -1.91
CCE1YKL011C TRP1P00912 224 aa3.13□□□□□ -1.91
CCE1YKL011C HHF1P02309 103 aaKnown RBP3.13□□□□□ -1.91
CCE1YKL011C NFT1P0CE68 1218 aa3.13□□□□□ -1.91
CCE1YKL011C PHO91P27514 894 aa3.13□□□□□ -1.91
CCE1YKL011C NAM9P27929 486 aa3.13□□□□□ -1.91
CCE1YKL011C DPH2P32461 534 aa3.13□□□□□ -1.91
CCE1YKL011C NRP1P32770 719 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
CCE1YKL011C PAD1P33751 242 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
CCE1YKL011C YKL097CP34245 136 aa3.13□□□□□ -1.91
CCE1YKL011C QDR3P38227 689 aa3.13□□□□□ -1.91
CCE1YKL011C PTH1P38876 190 aaKnown RBP3.13□□□□□ -1.91
CCE1YKL011C JLP2P40206 208 aa3.13□□□□□ -1.91
CCE1YKL011C SIM1P40472 476 aa3.13□□□□□ -1.91
CCE1YKL011C YPI1P43587 155 aa3.13□□□□□ -1.91
CCE1YKL011C MEH1Q02205 184 aa3.13□□□□□ -1.91
CCE1YKL011C NDL1Q06568 189 aa3.13□□□□□ -1.91
CCE1YKL011C NSE1Q07913 336 aa3.13□□□□□ -1.91
CCE1YKL011C YCL068CP25593 260 aa3.12□□□□□ -1.91
CCE1YKL011C PUP2P32379 260 aa3.12□□□□□ -1.91
CCE1YKL011C SKN1P33336 771 aa3.12□□□□□ -1.91
CCE1YKL011C ATP3P38077 311 aaKnown RBP3.12□□□□□ -1.91
CCE1YKL011C CHK1P38147 527 aa3.12□□□□□ -1.91
CCE1YKL011C MLH1P38920 769 aa3.12□□□□□ -1.91
CCE1YKL011C MTM1P53320 366 aa3.12□□□□□ -1.91
CCE1YKL011C HER2Q03557 464 aa3.12□□□□□ -1.91
CCE1YKL011C CCE1Q03702 353 aa3.12□□□□□ -1.91
CCE1YKL011C YRM1Q12340 786 aa3.12□□□□□ -1.91
CCE1YKL011C CYC3P06182 269 aa3.11□□□□□ -1.91
CCE1YKL011C RPS8AP0CX39 200 aaKnown RBP3.11□□□□□ -1.91
CCE1YKL011C RPS8BP0CX40 200 aaKnown RBP3.11□□□□□ -1.91
CCE1YKL011C NAT1P12945 854 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 38 ms