RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC6	YJL194W	SPP2	Q02521	185 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	YLR283W	Q05867	314 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	PIG1	Q06216	648 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	MRI1	Q06489	411 aa	Known RBP	4.14	□□□□□ -1.75
CDC6	YJL194W	GRS2	Q06817	618 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	POS5	Q06892	414 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	CYK3	Q07533	885 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	TEN1	Q07921	160 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	DNL4	Q08387	944 aa	Predicted RBP	4.14	□□□□□ -1.75
CDC6	YJL194W	SLF1	Q12034	447 aa	Known RBP	4.14	□□□□□ -1.75
CDC6	YJL194W	YRA1	Q12159	226 aa	Known RBP	4.14	□□□□□ -1.75
CDC6	YJL194W	YDR262W	Q12331	272 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	PAA1	Q12447	191 aa	Known RBP	4.14	□□□□□ -1.75
CDC6	YJL194W	TY1B-DR3	Q99231	1755 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	NUP157	P40064	1391 aa	Known RBP	4.13	□□□□□ -1.75
CDC6	YJL194W	NFT1	P0CE68	1218 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	RPS16A	P0CX51	143 aa	Known RBP	4.13	□□□□□ -1.75
CDC6	YJL194W	RPS16B	P0CX52	143 aa	Known RBP	4.13	□□□□□ -1.75
CDC6	YJL194W	MATALPHA2	P0CY08	210 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	HMLALPHA2	P0CY09	210 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	APA2	P22108	325 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	SGV1	P23293	657 aa	Known RBP	4.13	□□□□□ -1.75
CDC6	YJL194W	RNQ1	P25367	405 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	RHB1	P25378	209 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	YSC83	P32792	385 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	MIA40	P36046	403 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	SNU114	P36048	1008 aa	Known RBP	4.13	□□□□□ -1.75
CDC6	YJL194W	RSM22	P36056	628 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	RPL32	P38061	130 aa	Known RBP	4.13	□□□□□ -1.75
CDC6	YJL194W	IML3	P38265	245 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	ECM10	P39987	644 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	HXT9	P40885	567 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	PAC11	P40960	533 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	GLG2	P47011	380 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	GTF1	P53260	183 aa	Predicted RBP	4.13	□□□□□ -1.75
CDC6	YJL194W	FHN1	P53279	174 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	HXT11	P54862	567 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	COQ9	Q05779	260 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	SRO7	Q12038	1033 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	RRP12	Q12754	1228 aa	Known RBP	4.13	□□□□□ -1.75
CDC6	YJL194W	ATG2	P53855	1592 aa		4.13	□□□□□ -1.75
CDC6	YJL194W	GAL4	P04386	881 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	MATALPHA1	P0CY06	175 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	HMLALPHA1	P0CY07	175 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	KRS1	P15180	591 aa	Known RBP	4.12	□□□□□ -1.75
CDC6	YJL194W	UTR1	P21373	530 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	DPB2	P24482	689 aa	Predicted RBP	4.12	□□□□□ -1.75
CDC6	YJL194W	YSP3	P25036	478 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	ATP7	P30902	174 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	STE14	P32584	239 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	THI80	P35202	319 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	SPT10	P35208	640 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	HES1	P35843	434 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	YPT52	P36018	234 aa	Known RBP	4.12	□□□□□ -1.75
CDC6	YJL194W	MED8	P38304	223 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	SEC72	P39742	193 aa	Known RBP	4.12	□□□□□ -1.75
CDC6	YJL194W	YIL001W	P40560	513 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	IRC24	P40580	263 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
CDC6	YJL194W	TAX4	P47030	604 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	NPA3	P47122	385 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	MSY1	P48527	492 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	ADE16	P54113	591 aa	Known RBP	4.12	□□□□□ -1.75
CDC6	YJL194W	BUR2	Q05949	395 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	NSE1	Q07913	336 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	SMC5	Q08204	1093 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	RAX1	Q08760	435 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	TRM11	Q12463	433 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	RMD5	Q12508	421 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	RGS2	Q99188	309 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	AI5_BETA	Q9ZZX0	354 aa		4.12	□□□□□ -1.75
CDC6	YJL194W	TRM3	Q07527	1436 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	AAC1	P04710	309 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	RAD7	P06779	565 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	COR1	P07256	457 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	RPL18A	P0CX49	186 aa	Known RBP	4.11	□□□□□ -1.75
CDC6	YJL194W	RPL18B	P0CX50	186 aa	Known RBP	4.11	□□□□□ -1.75
CDC6	YJL194W	POL30	P15873	258 aa	Known RBP	4.11	□□□□□ -1.75
CDC6	YJL194W	GPI12	P23797	304 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	CNE1	P27825	502 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	LAC1	P28496	418 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	DEG1	P31115	442 aa	Known RBP	4.11	□□□□□ -1.75
CDC6	YJL194W	MSS51	P32335	436 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	RRN10	P38204	145 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	QDR3	P38227	689 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	PCA1	P38360	1216 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	GPI16	P38875	610 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	MBB1	P39534	108 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	CDC40	P40968	455 aa	Predicted RBP	4.11	□□□□□ -1.75
CDC6	YJL194W	SPG5	P42933	373 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	YFR020W	P43600	232 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	ATG27	P46989	271 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	KAP114	P53067	1004 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	LSG1	P53145	640 aa	Known RBP	4.11	□□□□□ -1.75
CDC6	YJL194W	SSU72	P53538	206 aa	Predicted RBP	4.11	□□□□□ -1.75
CDC6	YJL194W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
CDC6	YJL194W	AAT1	Q01802	451 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	YOR029W	Q12243	111 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	UBA3	Q99344	299 aa		4.11	□□□□□ -1.75
CDC6	YJL194W	YBT1	P32386	1661 aa		4.11	□□□□□ -1.75

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