RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W CSE1P33307 960 aa5.09□□□□□ -1.59
PDE1YGL248W YOX1P34161 385 aa5.09□□□□□ -1.59
PDE1YGL248W YBR144CP34215 104 aa5.09□□□□□ -1.59
PDE1YGL248W DBP7P36120 742 aaKnown RBP5.09□□□□□ -1.59
PDE1YGL248W RIB1P38066 345 aa5.09□□□□□ -1.59
PDE1YGL248W DTR1P38125 572 aa5.09□□□□□ -1.59
PDE1YGL248W BMT2P38278 337 aa5.09□□□□□ -1.59
PDE1YGL248W PFS1P38872 237 aa5.09□□□□□ -1.59
PDE1YGL248W YJL206CP39529 758 aa5.09□□□□□ -1.59
PDE1YGL248W RSM25P40496 264 aa5.09□□□□□ -1.59
PDE1YGL248W SCD6P45978 349 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59 RIP-Chip
PDE1YGL248W FMP33P46998 180 aa5.09□□□□□ -1.59
PDE1YGL248W MRX5P47007 382 aa5.09□□□□□ -1.59
PDE1YGL248W STE24P47154 453 aa5.09□□□□□ -1.59
PDE1YGL248W COS12P53053 380 aa5.09□□□□□ -1.59
PDE1YGL248W NUP116Q02630 1113 aa5.09□□□□□ -1.59
PDE1YGL248W SHR3Q02774 210 aa5.09□□□□□ -1.59
PDE1YGL248W FAR8Q05040 523 aa5.09□□□□□ -1.59
PDE1YGL248W CDC123Q05791 360 aa5.09□□□□□ -1.59
PDE1YGL248W ORM2Q06144 216 aa5.09□□□□□ -1.59
PDE1YGL248W VPS36Q06696 566 aa5.09□□□□□ -1.59
PDE1YGL248W DIS3Q08162 1001 aaKnown RBP5.09□□□□□ -1.59
PDE1YGL248W ESA1Q08649 445 aa5.09□□□□□ -1.59
PDE1YGL248W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
PDE1YGL248W YDR262WQ12331 272 aa5.09□□□□□ -1.59
PDE1YGL248W NOT5Q12514 560 aaPredicted RBP5.09□□□□□ -1.59
PDE1YGL248W PUT2P07275 575 aa5.08□□□□□ -1.6
PDE1YGL248W YML003WP0CF16 290 aa5.08□□□□□ -1.6
PDE1YGL248W RPL18AP0CX49 186 aaKnown RBP5.08□□□□□ -1.6
PDE1YGL248W RPL18BP0CX50 186 aaKnown RBP5.08□□□□□ -1.6
PDE1YGL248W MRP13P12686 339 aa5.08□□□□□ -1.6
PDE1YGL248W REV1P12689 985 aa5.08□□□□□ -1.6
PDE1YGL248W ART10P18634 518 aaKnown RBP5.08□□□□□ -1.6
PDE1YGL248W DAL82P21705 255 aa5.08□□□□□ -1.6
PDE1YGL248W KIN82P25341 720 aa5.08□□□□□ -1.6
PDE1YGL248W IMG1P25626 169 aa5.08□□□□□ -1.6
PDE1YGL248W MSS51P32335 436 aa5.08□□□□□ -1.6
PDE1YGL248W REC114P32841 428 aa5.08□□□□□ -1.6
PDE1YGL248W MNS1P32906 549 aa5.08□□□□□ -1.6
PDE1YGL248W RTC2P38279 296 aa5.08□□□□□ -1.6
PDE1YGL248W YAP3P38749 330 aa5.08□□□□□ -1.6
PDE1YGL248W MSS4P38994 779 aa5.08□□□□□ -1.6
PDE1YGL248W TFG2P41896 400 aaPredicted RBP5.08□□□□□ -1.6
PDE1YGL248W SPG5P42933 373 aa5.08□□□□□ -1.6
PDE1YGL248W AGP3P43548 558 aa5.08□□□□□ -1.6
PDE1YGL248W FAR3P46671 204 aa5.08□□□□□ -1.6
PDE1YGL248W RTT101P47050 842 aa5.08□□□□□ -1.6
PDE1YGL248W APS3P47064 194 aa5.08□□□□□ -1.6
PDE1YGL248W YGL117WP53133 265 aa5.08□□□□□ -1.6
PDE1YGL248W GET1P53192 235 aa5.08□□□□□ -1.6
PDE1YGL248W FMP30Q02883 468 aa5.08□□□□□ -1.6
PDE1YGL248W MSC2Q03455 724 aa5.08□□□□□ -1.6
PDE1YGL248W KRE28Q04431 385 aa5.08□□□□□ -1.6
PDE1YGL248W NSE1Q07913 336 aa5.08□□□□□ -1.6
PDE1YGL248W PEX27Q08580 376 aa5.08□□□□□ -1.6
PDE1YGL248W GEP3Q08622 556 aa5.08□□□□□ -1.6
PDE1YGL248W UBA3Q99344 299 aa5.08□□□□□ -1.6
PDE1YGL248W TUB3P09734 445 aaKnown RBP5.07□□□□□ -1.6
PDE1YGL248W ABF1P14164 731 aa5.07□□□□□ -1.6
PDE1YGL248W SNA3P14359 133 aa5.07□□□□□ -1.6
PDE1YGL248W FEN2P25621 512 aaKnown RBP5.07□□□□□ -1.6
PDE1YGL248W DCG1P32460 244 aa5.07□□□□□ -1.6
PDE1YGL248W COS9P36034 407 aa5.07□□□□□ -1.6
PDE1YGL248W CBT1P36038 271 aaPredicted RBP5.07□□□□□ -1.6
PDE1YGL248W PRS4P38063 326 aaPredicted RBP5.07□□□□□ -1.6
PDE1YGL248W RFT1P38206 574 aaPredicted RBP5.07□□□□□ -1.6
PDE1YGL248W EHT1P38295 451 aa5.07□□□□□ -1.6
PDE1YGL248W FMO1P38866 432 aa5.07□□□□□ -1.6
PDE1YGL248W YER130CP39959 443 aa5.07□□□□□ -1.6
PDE1YGL248W VAB2P40003 282 aa5.07□□□□□ -1.6
PDE1YGL248W YPT11P48559 417 aa5.07□□□□□ -1.6
PDE1YGL248W TRM112P53738 135 aaPredicted RBP5.07□□□□□ -1.6
PDE1YGL248W EFM6P53970 246 aa5.07□□□□□ -1.6
PDE1YGL248W SKI8Q02793 397 aaPredicted RBP5.07□□□□□ -1.6
PDE1YGL248W IRC4Q03036 179 aa5.07□□□□□ -1.6
PDE1YGL248W IZH1Q03419 316 aa5.07□□□□□ -1.6
PDE1YGL248W ROT1Q03691 256 aa5.07□□□□□ -1.6
PDE1YGL248W GIS1Q03833 894 aa5.07□□□□□ -1.6
PDE1YGL248W YFT2Q06676 274 aa5.07□□□□□ -1.6
PDE1YGL248W SYO1Q07395 620 aa5.07□□□□□ -1.6
PDE1YGL248W DNL4Q08387 944 aaPredicted RBP5.07□□□□□ -1.6
PDE1YGL248W PRP46Q12417 451 aaPredicted RBP5.07□□□□□ -1.6
PDE1YGL248W TRM11Q12463 433 aa5.07□□□□□ -1.6
PDE1YGL248W YPT1P01123 206 aaKnown RBP5.06□□□□□ -1.6
PDE1YGL248W RPL31BP0C2H9 113 aaKnown RBP5.06□□□□□ -1.6
PDE1YGL248W ISY1P21374 235 aaPredicted RBP5.06□□□□□ -1.6
PDE1YGL248W RRT12P25381 491 aa5.06□□□□□ -1.6
PDE1YGL248W NAM9P27929 486 aa5.06□□□□□ -1.6
PDE1YGL248W SPP381P38282 291 aaPredicted RBP5.06□□□□□ -1.6
PDE1YGL248W FZO1P38297 855 aa5.06□□□□□ -1.6
PDE1YGL248W BIG1P38813 335 aa5.06□□□□□ -1.6
PDE1YGL248W SPC97P38863 823 aa5.06□□□□□ -1.6
PDE1YGL248W CRG1P38892 291 aaRIP-Chip data5.06□□□□□ -1.6not detected
PDE1YGL248W RPH1P39956 796 aa5.06□□□□□ -1.6
PDE1YGL248W RPS7BP48164 190 aaKnown RBP5.06□□□□□ -1.6
PDE1YGL248W MSE1P48525 536 aa5.06□□□□□ -1.6
PDE1YGL248W ROG1P53118 685 aa5.06□□□□□ -1.6
PDE1YGL248W COX18P53239 316 aa5.06□□□□□ -1.6
PDE1YGL248W YGR127WP53275 312 aa5.06□□□□□ -1.6
PDE1YGL248W OCA2P53949 197 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms