RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHC1	YER096W	RHO4	Q00246	291 aa		7.39	□□□□□ -1.23
SHC1	YER096W	YDR239C	Q03780	787 aa		7.39	□□□□□ -1.23
SHC1	YER096W	RQC1	Q05468	723 aa	Known RBP	7.39	□□□□□ -1.23
SHC1	YER096W	BOP2	Q06150	570 aa		7.39	□□□□□ -1.23
SHC1	YER096W	YOL159C-A	Q3E769	90 aa		7.39	□□□□□ -1.23
SHC1	YER096W	MDM12	Q92328	271 aa		7.39	□□□□□ -1.23
SHC1	YER096W	CSF1	Q12150	2958 aa		7.39	□□□□□ -1.23
SHC1	YER096W	RPP1B	P10622	106 aa	Known RBP	7.38	□□□□□ -1.23
SHC1	YER096W	SLY41	P22215	453 aa		7.38	□□□□□ -1.23
SHC1	YER096W	CLB4	P24871	460 aa		7.38	□□□□□ -1.23
SHC1	YER096W	PTP1	P25044	335 aa		7.38	□□□□□ -1.23
SHC1	YER096W	CTR86	P25355	563 aa		7.38	□□□□□ -1.23
SHC1	YER096W	SCO2	P38072	301 aa		7.38	□□□□□ -1.23
SHC1	YER096W	LYS12	P40495	371 aa	Known RBP	7.38	□□□□□ -1.23
SHC1	YER096W	YRB2	P40517	327 aa		7.38	□□□□□ -1.23
SHC1	YER096W	HOS2	P53096	452 aa	Predicted RBP	7.38	□□□□□ -1.23
SHC1	YER096W	YGR079W	P53249	370 aa		7.38	□□□□□ -1.23
SHC1	YER096W	ESF2	P53743	316 aa	Known RBP	7.38	□□□□□ -1.23
SHC1	YER096W	PUS9	Q12069	462 aa		7.38	□□□□□ -1.23
SHC1	YER096W	BSC1	Q12140	328 aa		7.38	□□□□□ -1.23
SHC1	YER096W	STE7	P06784	515 aa		7.37	□□□□□ -1.23
SHC1	YER096W	NPR1	P22211	790 aa		7.37	□□□□□ -1.23
SHC1	YER096W	NTH1	P32356	751 aa		7.37	□□□□□ -1.23
SHC1	YER096W	CYS4	P32582	507 aa	Known RBP	7.37	□□□□□ -1.23
SHC1	YER096W	BCK2	P33306	851 aa		7.37	□□□□□ -1.23
SHC1	YER096W	TUL1	P36096	758 aa		7.37	□□□□□ -1.23
SHC1	YER096W	AHP1	P38013	176 aa	Known RBP	7.37	□□□□□ -1.23
SHC1	YER096W	RIM21	P48565	533 aa		7.37	□□□□□ -1.23
SHC1	YER096W	YNL181W	P53878	407 aa		7.37	□□□□□ -1.23
SHC1	YER096W	OAZ1	Q02803	292 aa		7.37	□□□□□ -1.23
SHC1	YER096W	MFB1	Q04922	465 aa		7.37	□□□□□ -1.23
SHC1	YER096W	XYL2	Q07993	356 aa		7.37	□□□□□ -1.23
SHC1	YER096W	DCI1	Q08558	271 aa		7.37	□□□□□ -1.23
SHC1	YER096W	PUS7	Q08647	676 aa	Known RBP	7.37	□□□□□ -1.23
SHC1	YER096W	RTK1	Q12100	620 aa	Predicted RBP	7.37	□□□□□ -1.23
SHC1	YER096W	PNO1	Q99216	274 aa	Known RBP	7.37	□□□□□ -1.23
SHC1	YER096W	MF(ALPHA)1	P01149	165 aa		7.37	□□□□□ -1.23
SHC1	YER096W	HTS1	P07263	546 aa	Known RBP	7.37	□□□□□ -1.23
SHC1	YER096W	PUT2	P07275	575 aa		7.37	□□□□□ -1.23
SHC1	YER096W	FBA1	P14540	359 aa	Known RBP	7.37	□□□□□ -1.23
SHC1	YER096W	CHA1	P25379	360 aa	Known RBP	7.37	□□□□□ -1.23
SHC1	YER096W	MGR1	P25573	417 aa		7.37	□□□□□ -1.23
SHC1	YER096W	TAH1	P25638	111 aa	Predicted RBP	7.37	□□□□□ -1.23
SHC1	YER096W	CWP1	P28319	239 aa		7.37	□□□□□ -1.23
SHC1	YER096W	SAC1	P32368	623 aa	Known RBP	7.37	□□□□□ -1.23
SHC1	YER096W	APE2	P32454	952 aa	Known RBP	7.37	□□□□□ -1.23
SHC1	YER096W	OMA1	P36163	345 aa		7.37	□□□□□ -1.23
SHC1	YER096W	YBR285W	P38354	144 aa		7.37	□□□□□ -1.23
SHC1	YER096W	YHL012W	P38709	493 aa		7.37	□□□□□ -1.23
SHC1	YER096W	YHR112C	P38716	378 aa		7.37	□□□□□ -1.23
SHC1	YER096W	MPH1	P40562	993 aa		7.37	□□□□□ -1.23
SHC1	YER096W	PAC10	P48363	199 aa		7.37	□□□□□ -1.23
SHC1	YER096W	REC102	Q02721	264 aa		7.37	□□□□□ -1.23
SHC1	YER096W	DBP10	Q12389	995 aa	Known RBP	7.37	□□□□□ -1.23
SHC1	YER096W	SKS1	Q12505	502 aa		7.37	□□□□□ -1.23
SHC1	YER096W	LAG2	Q92325	660 aa		7.37	□□□□□ -1.23
SHC1	YER096W	COR1	P07256	457 aa		7.36	□□□□□ -1.23
SHC1	YER096W	ARE1	P25628	610 aa		7.36	□□□□□ -1.23
SHC1	YER096W	DOA1	P36037	715 aa		7.36	□□□□□ -1.23
SHC1	YER096W	PDS1	P40316	373 aa	Predicted RBP	7.36	□□□□□ -1.23
SHC1	YER096W	CFD1	P40558	293 aa		7.36	□□□□□ -1.23
SHC1	YER096W	CAK1	P43568	368 aa	Predicted RBP	7.36	□□□□□ -1.23
SHC1	YER096W	STE24	P47154	453 aa		7.36	□□□□□ -1.23
SHC1	YER096W	YMR310C	Q04867	317 aa	Predicted RBP	7.36	□□□□□ -1.23
SHC1	YER096W	IRC13	Q08630	104 aa		7.36	□□□□□ -1.23
SHC1	YER096W	IRA2	P19158	3079 aa		7.35	□□□□□ -1.23
SHC1	YER096W	CAN1	P04817	590 aa		7.35	□□□□□ -1.23
SHC1	YER096W	HOP1	P20050	605 aa		7.35	□□□□□ -1.23
SHC1	YER096W	URE2	P23202	354 aa	Known RBP	7.35	□□□□□ -1.23
SHC1	YER096W	RPS1B	P23248	255 aa	Known RBP	7.35	□□□□□ -1.23
SHC1	YER096W	YCR006C	P25350	157 aa		7.35	□□□□□ -1.23
SHC1	YER096W	GDH2	P33327	1092 aa	Known RBP	7.35	□□□□□ -1.23
SHC1	YER096W	TIF3	P34167	436 aa	Known RBP	7.35	□□□□□ -1.23
SHC1	YER096W	AUR1	P36107	401 aa	Predicted RBP	7.35	□□□□□ -1.23
SHC1	YER096W	ZTA1	P38230	334 aa	Known RBP	7.35	□□□□□ -1.23
SHC1	YER096W	VMA10	P48836	114 aa	Known RBP	7.35	□□□□□ -1.23
SHC1	YER096W	ISR1	Q06098	443 aa	Known RBP	7.35	□□□□□ -1.23
SHC1	YER096W	SPO77	Q06134	477 aa		7.35	□□□□□ -1.23
SHC1	YER096W	DBP9	Q06218	594 aa	Known RBP	7.35	□□□□□ -1.23
SHC1	YER096W	RRT8	Q08219	342 aa		7.35	□□□□□ -1.23
SHC1	YER096W	WSC3	Q12215	556 aa		7.35	□□□□□ -1.23
SHC1	YER096W	YLR126C	Q12288	251 aa		7.35	□□□□□ -1.23
SHC1	YER096W	NKP1	Q12493	238 aa		7.35	□□□□□ -1.23
SHC1	YER096W	SIR3	P06701	978 aa		7.34	□□□□□ -1.23
SHC1	YER096W	MSB1	P21339	1137 aa	Known RBP	7.34	□□□□□ -1.23
SHC1	YER096W	RHB1	P25378	209 aa		7.34	□□□□□ -1.23
SHC1	YER096W	MXR2	P25566	168 aa		7.34	□□□□□ -1.23
SHC1	YER096W	PTR2	P32901	601 aa		7.34	□□□□□ -1.23
SHC1	YER096W	ECM8	P38246	354 aa		7.34	□□□□□ -1.23
SHC1	YER096W	ATG14	P38270	344 aa		7.34	□□□□□ -1.23
SHC1	YER096W	PTC2	P39966	464 aa	Known RBP	7.34	□□□□□ -1.23
SHC1	YER096W	RIO2	P40160	425 aa	Known RBP	7.34	□□□□□ -1.23
SHC1	YER096W	PRE6	P40303	254 aa	Known RBP	7.34	□□□□□ -1.23
SHC1	YER096W	IBA57	P47158	497 aa		7.34	□□□□□ -1.23
SHC1	YER096W	TOM22	P49334	152 aa		7.34	□□□□□ -1.23
SHC1	YER096W	DAM1	P53267	343 aa		7.34	□□□□□ -1.23
SHC1	YER096W	SYF2	P53277	215 aa	Predicted RBP	7.34	□□□□□ -1.23
SHC1	YER096W	SED5	Q01590	340 aa		7.34	□□□□□ -1.23
SHC1	YER096W	VIK1	Q12045	647 aa		7.34	□□□□□ -1.23
SHC1	YER096W	MMP1	Q12372	583 aa		7.34	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms