RNA–Protein interactions for RNA: YER088W-B

YER088W-B, Transcript of Dubious open reading frame, yeastyeast

Gene YER088W-B, Length 147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088W-BYER088W-B CSM1P25651 190 aa13.24□□□□□ -0.29
YER088W-BYER088W-B SEF1P34228 1148 aa13.24□□□□□ -0.29
YER088W-BYER088W-B TRM5P38793 499 aa13.24□□□□□ -0.29
YER088W-BYER088W-B LYS12P40495 371 aaKnown RBP13.24□□□□□ -0.29
YER088W-BYER088W-B HOS2P53096 452 aaPredicted RBP13.24□□□□□ -0.29
YER088W-BYER088W-B DYN3Q04949 312 aa13.24□□□□□ -0.29
YER088W-BYER088W-B REH1Q06709 432 aa13.24□□□□□ -0.29
YER088W-BYER088W-B YKL033W-AQ86ZR7 236 aa13.24□□□□□ -0.29
YER088W-BYER088W-B TOP3P13099 656 aa13.23□□□□□ -0.29
YER088W-BYER088W-B NAR1P23503 491 aaKnown RBP13.23□□□□□ -0.29
YER088W-BYER088W-B CPR3P25719 182 aa13.23□□□□□ -0.29
YER088W-BYER088W-B BUD14P27637 709 aa13.23□□□□□ -0.29
YER088W-BYER088W-B RLP7P40693 322 aaKnown RBP13.23□□□□□ -0.29
YER088W-BYER088W-B SPT20P50875 604 aa13.23□□□□□ -0.29
YER088W-BYER088W-B OCA1P50946 238 aaPredicted RBP13.23□□□□□ -0.29
YER088W-BYER088W-B MAL11P53048 616 aa13.23□□□□□ -0.29
YER088W-BYER088W-B YMR210WQ03649 449 aa13.23□□□□□ -0.29
YER088W-BYER088W-B HSP31Q04432 237 aa13.23□□□□□ -0.29
YER088W-BYER088W-B COS7Q07788 383 aa13.23□□□□□ -0.29
YER088W-BYER088W-B RAX1Q08760 435 aa13.23□□□□□ -0.29
YER088W-BYER088W-B SKS1Q12505 502 aa13.23□□□□□ -0.29
YER088W-BYER088W-B RPB5P20434 215 aa13.22□□□□□ -0.29
YER088W-BYER088W-B SEC62P21825 274 aa13.22□□□□□ -0.29
YER088W-BYER088W-B YCL049CP25577 312 aa13.22□□□□□ -0.29
YER088W-BYER088W-B TMA22P47089 198 aaPredicted RBP13.22□□□□□ -0.29
YER088W-BYER088W-B PAC10P48363 199 aa13.22□□□□□ -0.29
YER088W-BYER088W-B RAD33Q04231 177 aa13.22□□□□□ -0.29
YER088W-BYER088W-B YMR310CQ04867 317 aaPredicted RBP13.22□□□□□ -0.29
YER088W-BYER088W-B SSQ1Q05931 657 aaPredicted RBP13.22□□□□□ -0.29
YER088W-BYER088W-B FDH1Q08911 376 aa13.22□□□□□ -0.29
YER088W-BYER088W-B NAM9P27929 486 aa13.21□□□□□ -0.29
YER088W-BYER088W-B BET3P36149 193 aa13.21□□□□□ -0.29
YER088W-BYER088W-B YBR139WP38109 508 aa13.21□□□□□ -0.29
YER088W-BYER088W-B TRR2P38816 342 aa13.21□□□□□ -0.29
YER088W-BYER088W-B RIC1P40395 1056 aa13.21□□□□□ -0.29
YER088W-BYER088W-B MEC1P38111 2368 aa13.21□□□□□ -0.3
YER088W-BYER088W-B SAN1P22470 610 aa13.2□□□□□ -0.3
YER088W-BYER088W-B YHR177WP38867 453 aa13.2□□□□□ -0.3
YER088W-BYER088W-B SER3P40054 469 aa13.2□□□□□ -0.3
YER088W-BYER088W-B LAS21P40367 830 aa13.2□□□□□ -0.3
YER088W-BYER088W-B MRPS18P42847 217 aa13.2□□□□□ -0.3
YER088W-BYER088W-B ALB1P47019 175 aaPredicted RBP13.2□□□□□ -0.3
YER088W-BYER088W-B UBC9P50623 157 aaPredicted RBP13.2□□□□□ -0.3
YER088W-BYER088W-B MIG2P53035 382 aa13.2□□□□□ -0.3
YER088W-BYER088W-B YDR476CQ03362 224 aa13.2□□□□□ -0.3
YER088W-BYER088W-B GTB1Q04924 702 aa13.2□□□□□ -0.3
YER088W-BYER088W-B YPR172WQ06608 200 aa13.2□□□□□ -0.3
YER088W-BYER088W-B YPR091CQ06833 770 aa13.2□□□□□ -0.3
YER088W-BYER088W-B REX3Q12090 404 aa13.2□□□□□ -0.3
YER088W-BYER088W-B GPI12P23797 304 aa13.19□□□□□ -0.3
YER088W-BYER088W-B FES1P38260 290 aa13.19□□□□□ -0.3
YER088W-BYER088W-B IFA38P38286 347 aa13.19□□□□□ -0.3
YER088W-BYER088W-B PTI1P39927 425 aaPredicted RBP13.19□□□□□ -0.3
YER088W-BYER088W-B SNO3P43544 222 aa13.19□□□□□ -0.3
YER088W-BYER088W-B YJR115WP47152 169 aa13.19□□□□□ -0.3
YER088W-BYER088W-B ATP22P50273 684 aaPredicted RBP13.19□□□□□ -0.3
YER088W-BYER088W-B YGR067CP53243 804 aa13.19□□□□□ -0.3
YER088W-BYER088W-B NNF2P53253 936 aa13.19□□□□□ -0.3
YER088W-BYER088W-B NUP53Q03790 475 aa13.19□□□□□ -0.3
YER088W-BYER088W-B SPC24Q04477 213 aa13.19□□□□□ -0.3
YER088W-BYER088W-B GGA1Q06336 557 aa13.19□□□□□ -0.3
YER088W-BYER088W-B GPN2Q08726 347 aaPredicted RBP13.19□□□□□ -0.3
YER088W-BYER088W-B SNX3Q08826 162 aaKnown RBP13.19□□□□□ -0.3
YER088W-BYER088W-B BSC1Q12140 328 aa13.19□□□□□ -0.3
YER088W-BYER088W-B TRA1P38811 3744 aa13.18□□□□□ -0.3
YER088W-BYER088W-B THP2O13539 261 aaKnown RBP13.18□□□□□ -0.3
YER088W-BYER088W-B MEF1P25039 761 aa13.18□□□□□ -0.3
YER088W-BYER088W-B KEL2P50090 882 aa13.18□□□□□ -0.3
YER088W-BYER088W-B ROM1P53046 1155 aa13.18□□□□□ -0.3
YER088W-BYER088W-B YOR365CQ08844 703 aa13.18□□□□□ -0.3
YER088W-BYER088W-B MMP1Q12372 583 aa13.18□□□□□ -0.3
YER088W-BYER088W-B RNA1P11745 407 aaKnown RBP13.17□□□□□ -0.3
YER088W-BYER088W-B AAC3P18238 307 aa13.17□□□□□ -0.3
YER088W-BYER088W-B VPS51P36116 164 aa13.17□□□□□ -0.3
YER088W-BYER088W-B RCK1P38622 512 aa13.17□□□□□ -0.3
YER088W-BYER088W-B FAD1P38913 306 aa13.17□□□□□ -0.3
YER088W-BYER088W-B PZF1P39933 429 aa13.17□□□□□ -0.3
YER088W-BYER088W-B DLD3P39976 496 aaKnown RBP13.17□□□□□ -0.3
YER088W-BYER088W-B QDR2P40474 542 aa13.17□□□□□ -0.3
YER088W-BYER088W-B TPC1P53257 314 aa13.17□□□□□ -0.3
YER088W-BYER088W-B SMA2Q04658 369 aa13.17□□□□□ -0.3
YER088W-BYER088W-B OSW1Q08692 278 aa13.17□□□□□ -0.3
YER088W-BYER088W-B YIG1Q08956 461 aa13.17□□□□□ -0.3
YER088W-BYER088W-B YSF3P0C074 85 aaPredicted RBP13.16□□□□□ -0.3
YER088W-BYER088W-B MKK1P32490 508 aa13.16□□□□□ -0.3
YER088W-BYER088W-B SSE1P32589 693 aaKnown RBP13.16□□□□□ -0.3
YER088W-BYER088W-B MNN9P39107 395 aaKnown RBP13.16□□□□□ -0.3
YER088W-BYER088W-B YJL068CP40363 299 aa13.16□□□□□ -0.3
YER088W-BYER088W-B YJR141WP47172 347 aaPredicted RBP13.16□□□□□ -0.3
YER088W-BYER088W-B RPS12P48589 143 aaKnown RBP13.16□□□□□ -0.3
YER088W-BYER088W-B YGL260WP53056 76 aa13.16□□□□□ -0.3
YER088W-BYER088W-B GTR1Q00582 310 aa13.16□□□□□ -0.3
YER088W-BYER088W-B MUM3Q08750 479 aa13.16□□□□□ -0.3
YER088W-BYER088W-B YOR376WQ08900 122 aa13.16□□□□□ -0.3
YER088W-BYER088W-B TMS1Q12116 473 aa13.16□□□□□ -0.3
YER088W-BYER088W-B RPL20AP0CX23 172 aaKnown RBP13.15□□□□□ -0.3
YER088W-BYER088W-B RPL20BP0CX24 172 aaPredicted RBP13.15□□□□□ -0.3
YER088W-BYER088W-B ATP7P30902 174 aa13.15□□□□□ -0.3
YER088W-BYER088W-B KAE1P36132 386 aa13.15□□□□□ -0.3
YER088W-BYER088W-B ATG14P38270 344 aa13.15□□□□□ -0.3
Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms