RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261C-DYDR261C-D CDC50P25656 391 aa4.39□□□□□ -1.71
YDR261C-DYDR261C-D PTC1P35182 281 aa4.39□□□□□ -1.71
YDR261C-DYDR261C-D PRS4P38063 326 aaPredicted RBP4.39□□□□□ -1.71
YDR261C-DYDR261C-D AKL1P38080 1108 aaKnown RBP4.39□□□□□ -1.71
YDR261C-DYDR261C-D HIS2P38635 335 aa4.39□□□□□ -1.71
YDR261C-DYDR261C-D VPS52P39904 641 aa4.39□□□□□ -1.71
YDR261C-DYDR261C-D MSE1P48525 536 aa4.39□□□□□ -1.71
YDR261C-DYDR261C-D USE1P53146 245 aa4.39□□□□□ -1.71
YDR261C-DYDR261C-D RSC9Q03124 581 aa4.39□□□□□ -1.71
YDR261C-DYDR261C-D VTS1Q08831 523 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
YDR261C-DYDR261C-D OXR1Q08952 273 aa4.39□□□□□ -1.71
YDR261C-DYDR261C-D MET32Q12041 191 aa4.39□□□□□ -1.71
YDR261C-DYDR261C-D HOS1Q12214 470 aa4.39□□□□□ -1.71
YDR261C-DYDR261C-D SRF1Q12516 437 aa4.39□□□□□ -1.71
YDR261C-DYDR261C-D NHP6BP11633 99 aaKnown RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D ARE1P25628 610 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D PRO3P32263 286 aaKnown RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D TKL2P33315 681 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D DHR2P36009 735 aaPredicted RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D PRY2P36110 329 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D IST2P38250 946 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D ISC1P40015 477 aaKnown RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D KRE29P40026 464 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D CFD1P40558 293 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D AIF1P52923 378 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D RRP46P53256 223 aaPredicted RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D TOF2Q02208 771 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D GRX5Q02784 150 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D YDR541CQ03049 344 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D YMR099CQ03161 297 aaKnown RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D SRT1Q03175 343 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D SLD5Q03406 294 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D AIM6Q07716 390 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D BUD20Q08004 166 aaPredicted RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D MRP13P12686 339 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D BIO2P32451 375 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D ARP1P38696 384 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D RPS20P38701 121 aaKnown RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D AMA1P50082 593 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D PMT5P52867 743 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D ROG1P53118 685 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D SGF73P53165 657 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D MRX10Q05648 414 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D THI72Q08579 599 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D GPM1P00950 247 aaKnown RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D SED4P25365 1065 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D DMC1P25453 334 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D UGP1P32861 499 aaKnown RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D TOD6P34219 525 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D MRPL3P36516 390 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D PBP2P38151 413 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
YDR261C-DYDR261C-D POP8P38208 133 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D VID24P38263 362 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D ARN2P38724 620 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D GIC1P38785 314 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D IPI1P38803 334 aaPredicted RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D CTK3P46963 296 aaPredicted RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D IBA57P47158 497 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D CSL4P53859 292 aaPredicted RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D CDC55Q00362 526 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D FIT1Q04433 528 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D BLS1Q06071 122 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D GUP2Q08929 609 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-DR4O74302 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-LR4P0C2I8 440 aaKnown RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-AP0CX57 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-PR1P0CX58 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-ORP0CX59 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-PR2P0CX60 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-DR5P0CX65 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-ER2P0CX66 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-GR3P0CX67 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-LR1P0CX68 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-MR2P0CX69 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-DR6P0CX70 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-ER1P0CX71 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-LR2P0CX72 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-PLP0CX73 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-JR1P0CX74 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-LR3P0CX75 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-ML2P0CX76 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D PCK1P10963 549 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D SNA3P14359 133 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D CBS2P14905 389 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TRM1P15565 570 aaKnown RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D COQ1P18900 473 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D GCG1P32656 232 aaKnown RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D ORC2P32833 620 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D YHR035WP38769 630 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D RFC2P40348 353 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D QDR1P40475 563 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D MDJ2P42834 146 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-JR2P47099 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D SKP1P52286 194 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D SEH1P53011 349 aaKnown RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D EKI1Q03764 534 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-DR1Q03856 440 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D CTK1Q03957 528 aaKnown RBP4.38□□□□□ -1.71
YDR261C-DYDR261C-D URH1Q04179 340 aa4.38□□□□□ -1.71
YDR261C-DYDR261C-D TY1A-ML1Q04706 440 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms