RNA–Protein interactions for RNA: YDL049C

KNH1, Transcript of Protein with similarity to Kre9p, yeast

Gene KNH1, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KNH1	YDL049C	VHR1	P40522	640 aa		5.07	□□□□□ -1.6
KNH1	YDL049C	YNL320W	P42840	284 aa		5.07	□□□□□ -1.6
KNH1	YDL049C	BIO3	P50277	480 aa		5.07	□□□□□ -1.6
KNH1	YDL049C	SHY1	P53266	389 aa		5.07	□□□□□ -1.6
KNH1	YDL049C	YNL260C	P53846	198 aa		5.07	□□□□□ -1.6
KNH1	YDL049C	MPS1	P54199	764 aa		5.07	□□□□□ -1.6
KNH1	YDL049C	MOT3	P54785	490 aa	Known RBP	5.07	□□□□□ -1.6
KNH1	YDL049C	SDH1	Q00711	640 aa		5.07	□□□□□ -1.6
KNH1	YDL049C	NHP10	Q03435	203 aa		5.07	□□□□□ -1.6
KNH1	YDL049C	RAD34	Q06665	692 aa		5.07	□□□□□ -1.6
KNH1	YDL049C	RRP40	Q08285	240 aa	Known RBP	5.07	□□□□□ -1.6
KNH1	YDL049C	YPL245W	Q12179	454 aa	Known RBP	5.07	□□□□□ -1.6
KNH1	YDL049C	NSI1	Q12457	570 aa		5.07	□□□□□ -1.6
KNH1	YDL049C	RPS21B	Q3E754	87 aa	Known RBP	5.07	□□□□□ -1.6
KNH1	YDL049C	FAS1	P07149	2051 aa	Known RBP	5.07	□□□□□ -1.6
KNH1	YDL049C	SSA3	P09435	649 aa	Known RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	GLK1	P17709	500 aa	Known RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	RPB4	P20433	221 aa	Predicted RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	YCL049C	P25577	312 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	KRR1	P25586	316 aa	Predicted RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	RMA1	P36001	430 aa	Known RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	DHR2	P36009	735 aa	Predicted RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	APT2	P36973	181 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	ASC1	P38011	319 aa	Known RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	TSL1	P38427	1098 aa	Known RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	CCT4	P39078	528 aa	Known RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	PRP39	P39682	629 aa	Known RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	GID8	P40208	455 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	NDC80	P40460	691 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	RPL10	P41805	221 aa	Known RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	SEC27	P41811	889 aa	Known RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	UPF3	P48412	387 aa	Known RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	GIP3	Q03016	1276 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	YDR209C	Q03480	137 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	CRR1	Q05790	422 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	BOP2	Q06150	570 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	YLR177W	Q06251	628 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	YPS7	Q06325	596 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	ENT4	Q07872	247 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	RIO1	Q12196	484 aa	Known RBP	5.06	□□□□□ -1.6
KNH1	YDL049C	YDL177C	Q12257	170 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	MDY2	Q12285	212 aa		5.06	□□□□□ -1.6
KNH1	YDL049C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
KNH1	YDL049C	GUK1	P15454	187 aa	Known RBP	5.05	□□□□□ -1.6
KNH1	YDL049C	TRX3	P25372	127 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	ATO2	P32907	282 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	ETR1	P38071	380 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	CCT2	P39076	527 aa	Known RBP	5.05	□□□□□ -1.6
KNH1	YDL049C	JEM1	P40358	645 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	RIC1	P40395	1056 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	ICE2	P40499	491 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	CAB2	P40506	365 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	INA22	P40576	216 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	MAD2	P40958	196 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	IRC6	P43615	237 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	GPI8	P49018	411 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	ARC35	P53731	342 aa	Known RBP	5.05	□□□□□ -1.6
KNH1	YDL049C	OAZ1	Q02803	292 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	YMR210W	Q03649	449 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	CSN9	Q03981	162 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	TAF11	Q04226	346 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	BUD22	Q04347	519 aa	Known RBP	5.05	□□□□□ -1.6
KNH1	YDL049C	RSA3	Q05942	220 aa	Known RBP	5.05	□□□□□ -1.6
KNH1	YDL049C	YET3	Q07451	203 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	MCH5	Q08777	521 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	YOR376W	Q08900	122 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	PUS9	Q12069	462 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	RUD3	Q12234	484 aa	Known RBP	5.05	□□□□□ -1.6
KNH1	YDL049C	PRS5	Q12265	496 aa	Known RBP	5.05	□□□□□ -1.6
KNH1	YDL049C	YPL247C	Q12523	523 aa		5.05	□□□□□ -1.6
KNH1	YDL049C	SPT3	P06844	337 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	COR1	P07256	457 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	SSC1	P0CS90	654 aa	Known RBP	5.04	□□□□□ -1.6
KNH1	YDL049C	MSS116	P15424	664 aa	Known RBP	5.04	□□□□□ -1.6
KNH1	YDL049C	SPS22	P25380	463 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	YCL042W	P25572	119 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	STP22	P25604	385 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	ATG15	P25641	520 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	not detected
KNH1	YDL049C	OAR1	P35731	278 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	CBP4	P37267	147 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	VPS52	P39904	641 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	SAP1	P39955	897 aa	Known RBP	5.04	□□□□□ -1.6
KNH1	YDL049C	YEL057C	P39983	233 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	FMP52	P40008	231 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	PAC11	P40960	533 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	YRB1	P41920	201 aa	Known RBP	5.04	□□□□□ -1.6
KNH1	YDL049C	MAD3	P47074	515 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	TEL2	P53038	688 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	HOS2	P53096	452 aa	Predicted RBP	5.04	□□□□□ -1.6
KNH1	YDL049C	KTR5	P53966	522 aa	Predicted RBP	5.04	□□□□□ -1.6
KNH1	YDL049C	TIM10	P87108	93 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	PRP3	Q03338	469 aa	Predicted RBP	5.04	□□□□□ -1.6
KNH1	YDL049C	HPT1	Q04178	221 aa	Known RBP	5.04	□□□□□ -1.6
KNH1	YDL049C	RIF2	Q06208	395 aa		5.04	□□□□□ -1.6
KNH1	YDL049C	GCD1	P09032	578 aa	Predicted RBP	5.03	□□□□□ -1.6
KNH1	YDL049C	VPS33	P20795	691 aa		5.03	□□□□□ -1.6
KNH1	YDL049C	MKK1	P32490	508 aa		5.03	□□□□□ -1.6
KNH1	YDL049C	PET127	P32606	800 aa		5.03	□□□□□ -1.6
KNH1	YDL049C	ASK1	P35734	292 aa		5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms