RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT2	YDL007W	NSE5	Q03718	556 aa		5.21	□□□□□ -1.58
RPT2	YDL007W	PPN1	Q04119	674 aa		5.21	□□□□□ -1.58
RPT2	YDL007W	RAD33	Q04231	177 aa		5.21	□□□□□ -1.58
RPT2	YDL007W	GRS2	Q06817	618 aa		5.21	□□□□□ -1.58
RPT2	YDL007W	CRD1	Q07560	283 aa		5.21	□□□□□ -1.58
RPT2	YDL007W	AIM39	Q08223	395 aa		5.21	□□□□□ -1.58
RPT2	YDL007W	GUP2	Q08929	609 aa		5.21	□□□□□ -1.58
RPT2	YDL007W	FEX2	Q08991	375 aa		5.21	□□□□□ -1.58
RPT2	YDL007W	YOR289W	Q12012	251 aa	Predicted RBP	5.21	□□□□□ -1.58
RPT2	YDL007W	SLF1	Q12034	447 aa	Known RBP	5.21	□□□□□ -1.58
RPT2	YDL007W	ATG34	Q12292	412 aa		5.21	□□□□□ -1.58
RPT2	YDL007W	PST2	Q12335	198 aa	Known RBP	5.21	□□□□□ -1.58
RPT2	YDL007W	SAS5	Q99314	248 aa		5.21	□□□□□ -1.58
RPT2	YDL007W	ATP1	P07251	545 aa	Known RBP	5.2	□□□□□ -1.58
RPT2	YDL007W	YGL041W-A	P0C5N3	154 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	COS2	P0CX12	379 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	COS3	P0CX13	379 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	ATP12	P22135	325 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	DBR1	P24309	405 aa	Known RBP	5.2	□□□□□ -1.58
RPT2	YDL007W	CNB1	P25296	175 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	RHB1	P25378	209 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	EMC1	P25574	760 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	PMI40	P29952	429 aa	Known RBP	5.2	□□□□□ -1.58
RPT2	YDL007W	ARP2	P32381	391 aa	Known RBP	5.2	□□□□□ -1.58
RPT2	YDL007W	COT1	P32798	439 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	MRPL6	P32904	214 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	LST4	P34239	828 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	JEN1	P36035	616 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	MRPL40	P36534	297 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	RRP4	P38792	359 aa	Known RBP	5.2	□□□□□ -1.58
RPT2	YDL007W	MLH1	P38920	769 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	DUN1	P39009	513 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	PLB1	P39105	664 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	PCL6	P40038	420 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	DOT6	P40059	670 aa	Known RBP	5.2	□□□□□ -1.58
RPT2	YDL007W	NDE1	P40215	560 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	APS3	P47064	194 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	UBC9	P50623	157 aa	Predicted RBP	5.2	□□□□□ -1.58
RPT2	YDL007W	YAT1	P80235	687 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	NUP49	Q02199	472 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	SMA1	Q02651	245 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	YPL068C	Q02749	293 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	NHX1	Q04121	633 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	DBP9	Q06218	594 aa	Known RBP	5.2	□□□□□ -1.58
RPT2	YDL007W	TRE2	Q08693	809 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	YPL247C	Q12523	523 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	TMA7	Q3E764	64 aa	Known RBP	5.2	□□□□□ -1.58
RPT2	YDL007W	IZH4	Q99393	312 aa		5.2	□□□□□ -1.58
RPT2	YDL007W	PRP8	P33334	2413 aa	Known RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	ARG81	P05085	880 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	RAD7	P06779	565 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	SEC53	P07283	254 aa	Known RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	KIN82	P25341	720 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	CIN8	P27895	1000 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	CAM1	P29547	415 aa	Known RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	CYS3	P31373	394 aa	Known RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	PMT2	P31382	759 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	RNP1	P32385	249 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	HYM1	P32464	399 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	MSS1	P32559	526 aa	Predicted RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	RPD3	P32561	433 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	UTR4	P32626	227 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	HIS7	P33734	552 aa	Known RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	MRPL17	P36528	281 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	YBR056W	P38081	501 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	YER034W	P40022	185 aa	Known RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	COA1	P40452	197 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	YJL132W	P47014	750 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	MPS3	P47069	682 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	HXT16	P47185	567 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	MNN10	P50108	393 aa	Known RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	YGL036W	P53185	909 aa	Predicted RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	YGR168C	P53293	376 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	RTT102	P53330	157 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	YNR068C	P53754	272 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	FYV6	P53913	173 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	RPL6A	Q02326	176 aa	Known RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	GAS3	Q03655	524 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	YAP6	Q03935	383 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	HPT1	Q04178	221 aa	Known RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	CRR1	Q05790	422 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	YLR224W	Q05947	369 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	YLR413W	Q06689	675 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	YTM1	Q12024	460 aa	Predicted RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	PCD1	Q12524	340 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	YKL018C-A	Q3E7A7	99 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	RIB3	Q99258	208 aa		5.19	□□□□□ -1.58
RPT2	YDL007W	UTP20	P35194	2493 aa	Known RBP	5.19	□□□□□ -1.58
RPT2	YDL007W	IRA1	P18963	3092 aa		5.18	□□□□□ -1.58
RPT2	YDL007W	RPS9A	O13516	197 aa	Known RBP	5.18	□□□□□ -1.58
RPT2	YDL007W	TUB2	P02557	457 aa	Known RBP	5.18	□□□□□ -1.58
RPT2	YDL007W	ERG20	P08524	352 aa	Known RBP	5.18	□□□□□ -1.58
RPT2	YDL007W	OCA4	P25366	362 aa		5.18	□□□□□ -1.58
RPT2	YDL007W	PEX34	P25584	144 aa		5.18	□□□□□ -1.58
RPT2	YDL007W	IMG2	P25642	146 aa	Predicted RBP	5.18	□□□□□ -1.58
RPT2	YDL007W	BUB2	P26448	306 aa	Predicted RBP	5.18	□□□□□ -1.58
RPT2	YDL007W	DAL3	P32459	195 aa		5.18	□□□□□ -1.58
RPT2	YDL007W	STE14	P32584	239 aa		5.18	□□□□□ -1.58
RPT2	YDL007W	SDH3	P33421	198 aa		5.18	□□□□□ -1.58
RPT2	YDL007W	FLR1	P38124	548 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms