RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	CDC24	P11433	854 aa	Predicted RBP	4.11	□□□□□ -1.75
SLX1	YBR228W	APE1	P14904	514 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	MTF1	P14908	341 aa	Known RBP	4.11	□□□□□ -1.75
SLX1	YBR228W	PEX34	P25584	144 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	MGT1	P26188	188 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	AGA1	P32323	725 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	RAD5	P32849	1169 aa	Predicted RBP	4.11	□□□□□ -1.75
SLX1	YBR228W	TEF4	P36008	412 aa	Known RBP	4.11	□□□□□ -1.75
SLX1	YBR228W	YNK1	P36010	153 aa	Known RBP	4.11	□□□□□ -1.75
SLX1	YBR228W	DUG2	P38149	878 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	SPP381	P38282	291 aa	Predicted RBP	4.11	□□□□□ -1.75
SLX1	YBR228W	URA8	P38627	578 aa	Predicted RBP	4.11	□□□□□ -1.75
SLX1	YBR228W	DIA4	P38705	446 aa	Predicted RBP	4.11	□□□□□ -1.75
SLX1	YBR228W	PSD1	P39006	500 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	EDC3	P39998	551 aa	Known RBP	4.11	□□□□□ -1.75
SLX1	YBR228W	ATM1	P40416	690 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	SEC24	P40482	926 aa	Known RBP	4.11	□□□□□ -1.75
SLX1	YBR228W	MOB1	P40484	314 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	INA22	P40576	216 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	YJL213W	P40896	331 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	SMK1	P41808	388 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	IME4	P41833	600 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	UFE1	P41834	346 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	SNG1	P46950	547 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	RTT101	P47050	842 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	YDL186W	P48568	277 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	YGR127W	P53275	312 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	RTS3	P53289	263 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	VPS9	P54787	451 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	CIA1	Q05583	330 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	GRX8	Q05926	109 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	SSK1	Q07084	712 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	RRD2	Q12461	358 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	AVL9	Q12500	764 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	SET6	Q12529	373 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	EFG1	Q3E705	233 aa	Known RBP	4.11	□□□□□ -1.75
SLX1	YBR228W	YBR085C-A	O43137	85 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	QCR6	P00127	147 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	RPL15A	P05748	204 aa	Known RBP	4.1	□□□□□ -1.75
SLX1	YBR228W	CBF1	P17106	351 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	PPH22	P23595	377 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	ATS1	P31386	333 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	TPS2	P31688	896 aa	Known RBP	4.1	□□□□□ -1.75
SLX1	YBR228W	LTV1	P34078	463 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	ROT2	P38138	954 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	ARP1	P38696	384 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	OTU2	P38747	307 aa	Known RBP	4.1	□□□□□ -1.75
SLX1	YBR228W	YEL028W	P39989	153 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	SCC4	P40090	624 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	RPS10B	P46784	105 aa	Known RBP	4.1	□□□□□ -1.75
SLX1	YBR228W	YJL132W	P47014	750 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	YJR079W	P47126	109 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	TCB2	P48231	1178 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	MRX6	P48564	524 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	TRM112	P53738	135 aa	Predicted RBP	4.1	□□□□□ -1.75
SLX1	YBR228W	YNR061C	P53747	219 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	INP2	Q03824	705 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	RPS10A	Q08745	105 aa	Predicted RBP	4.1	□□□□□ -1.75
SLX1	YBR228W	YOR387C	Q08910	206 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	NUS1	Q12063	375 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	PDH1	Q12428	516 aa	Known RBP	4.1	□□□□□ -1.75
SLX1	YBR228W	YKL068W-A	Q3E826	78 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	SEY1	Q99287	776 aa		4.1	□□□□□ -1.75
SLX1	YBR228W	BEM2	P39960	2167 aa	Known RBP	4.1	□□□□□ -1.75
SLX1	YBR228W	ARG4	P04076	463 aa	Predicted RBP	4.09	□□□□□ -1.75
SLX1	YBR228W	RAD1	P06777	1100 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	CMD1	P06787	147 aa	Known RBP	4.09	□□□□□ -1.75
SLX1	YBR228W	IMA3	P0CW40	589 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	IMA4	P0CW41	589 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	HEM15	P16622	393 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	SEC62	P21825	274 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	MUD2	P36084	527 aa	Known RBP	4.09	□□□□□ -1.75
SLX1	YBR228W	RPC37	P36121	282 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	FUI1	P38196	639 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	KAP104	P38217	918 aa	Known RBP	4.09	□□□□□ -1.75
SLX1	YBR228W	YBP1	P38315	674 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	ATG12	P38316	186 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	MSR1	P38714	643 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	UBA4	P38820	440 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	UME6	P39001	836 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	SMX2	P40204	77 aa	Known RBP	4.09	□□□□□ -1.75
SLX1	YBR228W	PRP24	P49960	444 aa	Known RBP	4.09	□□□□□ -1.75
SLX1	YBR228W	YMR160W	Q03823	816 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	YMR027W	Q04371	470 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	SWC7	Q06707	132 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	IMA2	Q08295	589 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	AAD15	Q08361	143 aa		4.09	□□□□□ -1.75
SLX1	YBR228W	RPB2	P08518	1224 aa	Known RBP	4.08	□□□□□ -1.76
SLX1	YBR228W	YME1	P32795	747 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	PTR2	P32901	601 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	SGE1	P33335	543 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	PTH2	P34222	208 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	CCT2	P39076	527 aa	Known RBP	4.08	□□□□□ -1.76
SLX1	YBR228W	RPH1	P39956	796 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	BUR6	P40096	142 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	RIC1	P40395	1056 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	TRF5	P48561	642 aa	Known RBP	4.08	□□□□□ -1.76
SLX1	YBR228W	TOF2	Q02208	771 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	SHR3	Q02774	210 aa		4.08	□□□□□ -1.76
SLX1	YBR228W	RTN1	Q04947	295 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms